BAC Information

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BAC

Clone NameB6Ng01-038L08
Chromosome6 (Build37)
Map Location 76,281,697 - 76,282,650
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042942, LOC668143, EG668145, EG546907, LOC100042952
Downstream geneLOC668153, EG668155, LOC100042956, Ctnna2, Lrrtm1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-038L08.bB6Ng01-038L08.g
ACCDH866189DH866190
length9541,156
definitionDH866189|Mus musculus domesticus DNA, BAC clone: B6Ng01-038L08, 5' end.DH866190|Mus musculus domesticus DNA, BAC clone: B6Ng01-038L08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactgtgacatggagctatccatggagataatgaaagcaaaggaa
gtgactatcactgaagaaactgagatcttcatttgtagactatcatgata
aaaacagttaagagtcagatatctgattccatatatttccacaccctgtt
tgccactgaattaacgatgatggtaatagaaagaaaagaactcaaacact
tttctttaaggcaatcacttgataaatgtctgagaattttgaagtgccca
ctttggttatcccctgcagatgacagcttaaggaaatcaagcgattgtca
caccccaccacatgcaggcaatcaaacaattccattatcatttcagggag
tattcagtaaatcctccacagagagatggatctgttcaaaaccatatact
tatcagtagcaggatcactaagtgaatatctttttgttgctgcctgagtg
ttatggattgaacagttgtccccagaatttgatggtgatgggtgacaggc
tcattaggaggtagtcaagcttaaataaagacattaaagtagatctttca
tgatgtccttcgtttcctcagtagaacagttacctgagggctagatatgt
agcacaatgattaatagcacttgtgttctttaggagactagattacaatt
tccagcatatacatctgacaggtgaaaacttcagctccagggtcatgtaa
taccgctggcctcagtagccttagcaggcagctgcactcatgtgtagatg
cacataccttcctatctttcttatggaagaaaattattttttaaaaaaat
caactggaagttgggacattttccttggtctaccacatgatgacagaatg
acaaaatatccacctcagagccagaaagtgagccctttgcagaaactaga
gctataatttgatctagggacacccaatgctcagagttggggggagggga
ggat
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ctcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactatggaaatcagtctggcggttcctca
gaaaactggatatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgcttcactat
gttcatagcagccttatttataatagccagaagctggaaggaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taagatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtgaacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagataa
aaggatggaccatgtagacactagcatatccggggatccatcccataatc
agcttccaaatgctgacaccattgcatacactagcaagattatgctgaaa
ggaccctgatatagctgtctcttgtcagagtatgcctgggcctagcaaac
atagaagtggatgctcacagtcggctattggatggatcacatgggctcca
atgaagagctagagaagtaccaagaagctaaagggatctgcaaccctata
ggtggacacatatgactatcagtaccccggaactcttgactctagctgca
tatgcatcaaagatggctagtcgcatcactgaaggaaggcaatggaacgc
aacttattggcctagtacggggacgcctgggcattaagtaatgttgtacg
tcaggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_76281697_76282650
seq2: B6Ng01-038L08.b_49_1002

seq1  GAATTCACTGTGACATGGAGCTATCCATGGAGATAATGAAAGCAAAGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGTGACATGGAGCTATCCATGGAGATAATGAAAGCAAAGGAA  50

seq1  GTGACTATCACTGAAGAAACTGAGATCTTCATTTGTAGACTATCATGATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTATCACTGAAGAAACTGAGATCTTCATTTGTAGACTATCATGATA  100

seq1  AAAACAGTTAAGAGTCAGATATCTGATTCCATATATTTCCACACCCTGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGTTAAGAGTCAGATATCTGATTCCATATATTTCCACACCCTGTT  150

seq1  TGCCACTGAATTAACGATGATGGTAATAGAAAGAAAAGAACTCAAACACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACTGAATTAACGATGATGGTAATAGAAAGAAAAGAACTCAAACACT  200

seq1  TTTCTTTAAGGCAATCACTTGATAAATGTCTGAGAATTTTGAAGTGCCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTAAGGCAATCACTTGATAAATGTCTGAGAATTTTGAAGTGCCCA  250

seq1  CTTTGGTTATCCCCTGCAGATGACAGCTTAAGGAAATCAAGCGATTGTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGTTATCCCCTGCAGATGACAGCTTAAGGAAATCAAGCGATTGTCA  300

seq1  CACCCCACCACATGCAGGCAATCAAACAATTCCATTATCATTTCAGGGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCACCACATGCAGGCAATCAAACAATTCCATTATCATTTCAGGGAG  350

seq1  TATTCAGTAAATCCTCCACAGAGAGATGGATCTGTTCAAAACCATATACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAGTAAATCCTCCACAGAGAGATGGATCTGTTCAAAACCATATACT  400

seq1  TATCAGTAGCAGGATCACTAAGTGAATATCTTTTTGTTGCTGCCTGAGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGTAGCAGGATCACTAAGTGAATATCTTTTTGTTGCTGCCTGAGTG  450

seq1  TTATGGATTGAACAGTTGTCCCCAGAATTTGATGGTGATGGGTGACAGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGATTGAACAGTTGTCCCCAGAATTTGATGGTGATGGGTGACAGGC  500

seq1  TCATTAGGAGGTAGTCAAGCTTAAATAAAGACATTAAAGTAGATCTTTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTAGGAGGTAGTCAAGCTTAAATAAAGACATTAAAGTAGATCTTTCA  550

seq1  TGATGTCCTTCGTTTCCTCAGTAGAACAGTTACCTGAGGGCTAGATATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTCCTTCGTTTCCTCAGTAGAACAGTTACCTGAGGGCTAGATATGT  600

seq1  AGCACAATGATTAATAGCACTTGTGTTCTTTAGGAGACTAGATTACAATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAATGATTAATAGCACTTGTGTTCTTTAGGAGACTAGATTACAATT  650

seq1  TCCAGCATATACATCTGACAGGTGAAAACTTCAGCTCCAGGGTCATGTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCATATACATCTGACAGGTGAAAACTTCAGCTCCAGGGTCATGTAA  700

seq1  TACCGCTGGCCTCAGTAGCCTTAGCAGGCAGCTGCACTCATGTGTAGATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCGCTGGCCTCAGTAGCCTTAGCAGGCAGCTGCACTCATGTGTAGATG  750

seq1  CACATACCTTCCTATCTTTCTTATGGAAGAAAATTATTTTTTAAAAAAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATACCTTCCTATCTTTCTTATGGAAGAAAATTATTTTTTAAAAAAAT  800

seq1  CAACTGGAAGTTGGGACATTTTCCTTGGTCTACCACATGATGACAGAATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGGAAGTTGGGACATTTTCCTTGGTCTACCACATGATGACAGAATG  850

seq1  ACAAAATATCCACCTCAGAGCCAGAAAGTGAGCCCTTTGCAGAAACTAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAATATCCACCTCAGAGCCAGAAAGTGAGCCCTTTGCAGAAACTAGA  900

seq1  GCTATAATTTGATCTAGGGACACCCAATGCTCAGAGTTGGGGGGAGGGGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATAATTTGATCTAGGGACACCCAATGCTCAGAGTTGGGGGGAGGGGA  950

seq1  GGAT  954
      ||||
seq2  GGAT  954