BAC Information

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BAC

Clone NameB6Ng01-039F02
Chromosome6 (Build37)
Map Location 18,835,442 - 18,835,968
singlet/doubletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-039F02.bB6Ng01-039F02.g
ACCDH866619DH866620
length9941,165
definitionDH866619|Mus musculus domesticus DNA, BAC clone: B6Ng01-039F02, 5' end.DH866620|Mus musculus domesticus DNA, BAC clone: B6Ng01-039F02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagttctgagccccatttttaatggggttatttgattt
ttctaaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagattctttcccaatctgttggtggtct
ttttgtcttattggcagtgtcttttgccttgcagaagctttggagtttca
tgaggtcccatttatcgattcttgatcttacagcacaagccattgctgtt
ctattcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtttctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataggtatggatcgattcac
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtccttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctatttcattgg
tctacttgtctgtcactataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaagtcagggatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcagattgctctttctaattcgttgaagaattgagttggaattta
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagaaacttgatttttttatcata
cagatctttcacttccttagttagagtcacaccaagatatttgtattatt
tgtgactattgagaagggtgtgtttccctatttctttctcagcc

gaattctcacctgaggaataccgaatggcagtgaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaagattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctta
gaaaattggacatagtactactggagaatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaaattatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggttacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaaatgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
atggatggaccatgtatagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagactttatcgaaa
ggacccagatgtagctgtctctttgtgagactatgccggggcctagcaaa
cacagaagtggatgctcacagtcagctaatggatggatcacagggcttcc
aatggaggagctagagaaagtacccaagagctaaaggggatctgcaccct
ataggtggatcacattatgactacagtacccgagctctgacttctagctg
catatgtatcaaaagatggctagtcggcatcactggtgagagtcatgaac
cgcaactttaatgtcccaacaggaacgccaggtcaaaatggggaagtggc
ggttaggggagatgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835442_18835968
seq2: B6Ng01-039F02.b_46_573 (reverse)

seq1  CCAGAGATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50

seq1  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  100
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TAAAACCATCCAGTGGAAGAAGGACAGCATTTTCAACAATTGGTGCTGGC  100

seq1  ACAACTGGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCT  150
      |||||||||||||||| ||||||||||||||||||||||||||| |||||
seq2  ACAACTGGTTGTTATCATGTAGAAGAATGTGAATCGATCCATACCTATCT  150

seq1  CCATGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  200
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  200

seq1  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250

seq1  TGGGCAGAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTG  299
      |||||| ||||||||| |||||||| |||||||||||||| |||||||| 
seq2  TGGGCACAGGGGAAAAATTCCTGAATAGAACAGCAATGGCTTGTGCTGTA  300

seq1  AGGTAGAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  349
      || |  |||||||| ||||||||||| |||||||||||||| ||||||||
seq2  AGATCAAGAATCGATAAATGGGACCTCATGAAACTCCAAAGCTTCTGCAA  350

seq1  GGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAA  399
      |||||||||||| | |||||||||||||||||||||||||||||||||||
seq2  GGCAAAAGACACTGCCAATAAGACAAAAAGACCACCAACAGATTGGGAAA  400

seq1  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  449
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  450

seq1  AAAGAACTCAAGAAGGTGGACTTCAG-AAAATCAAATAACCCCATTAATA  498
      ||||||||||||||||||||||| || ||||||||||||||||||||| |
seq2  AAAGAACTCAAGAAGGTGGACTTTAGAAAAATCAAATAACCCCATTAA-A  499

seq1  AATGGGGCTCAGAACTGAACAAAGAATTC  527
      |||||||||||||||||||||||||||||
seq2  AATGGGGCTCAGAACTGAACAAAGAATTC  528


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