BAC Information

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BAC

Clone NameB6Ng01-044C06
Chromosome6 (Build37)
Map Location 134,938,612 - 134,939,534
singlet/doubletsinglet
Overlap genenone
Upstream geneEtv6, LOC100043660, Bcl2l14, Lrp6, Mansc1, Loh12cr1, LOC100043884, Dusp16, Crebl2, Gpr19, Cdkn1b, 1190002F15Rik, Apold1
Downstream geneDdx47, Gprc5a, Gprc5d, LOC100043668, Hebp1, 8430419L09Rik, Gsg1, Pbp2, LOC100043890, Emp1, Grin2b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-044C06.bB6Ng01-044C06.g
ACCDH869984DH869985
length9211,246
definitionDH869984|Mus musculus domesticus DNA, BAC clone: B6Ng01-044C06, 5' end.DH869985|Mus musculus domesticus DNA, BAC clone: B6Ng01-044C06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgtgataacaagcatccttcccgttaatagcaacgggtctctt
gttgataggaacttaaaagctgcttttgtttctgacaaaactggaagacc
gtaagaaggaatataaaccctgctgcacactggagctggacaaagagggc
cctaagttccaggaatgttctgttagcaaccagagttgtcagaagggaaa
ctgtgctgatagagtgggtcccatctggggaccaggaatgtacacctggg
atcctcagcagcccctgtctcactggcaatgacaatgggctgtggagagt
ggtggtgttgtggtcttactgtttaatgaggttttgtacctccgttataa
ccaaccctccctcaccgtaccacccactcaaagtgttgtactagaaggcc
tgctgtttgcttgatcccagaagtatagccaggggccactgccagtgtct
cctcacccacagtgagacactaactggttcccatggccaagtgtatgaag
agagttgaaaccgagataggctgtttctgaaggtggagctgggaaggagt
catacctcaaatctttctcgaaggcaaaagctgctcttccaggtcaacaa
acaacactgccctcatcttatacgggagattagatggcggctctataggc
gaaggccttctctatggctccccatggcggatcccgatgaaaagagacag
ttcatggttttaaggcattcattgtcatggcgtcaagtggatgagtaaaa
ctgtaccccacttttcaggacggtcctgaggttaaatatcttttgcaggg
aggagtgtctgggaaggggagtttattggtaagcctccaggcctttaggt
acctcattaaaatggagatgtcttgaggctgcagaccacaggtcacgtcc
tctacttatggagggcttgga
gaattccaagtcatcttgggccagagagagagaggaatacacaagccttg
cagggtctgtctctctgtctctgtctgtctctctctgtctctgtctctgt
ctctgtctctctctctctctcacacacacacacacacacatacacacaca
catctatctgcagtcctgctaggcacaccaactccatacaaactcagaca
caatccaaaacgcttcaggaggctacgtgcttggcctgccctggtggatg
gtgcacatagagtcataaggtcagaagcttctcccatggctagcctgtag
atctcatctgtatcctttgcagcagcctttataacaaatgcagagacatt
tccccgactcctgggagtcagtcctgacaggaaagggtgagaacacccag
tttatagcagagaaattagaaacacagatctagcacccagggaccagact
gataaacaagtgatggtgatccgtttggaattctgggctctctcaatcca
tgggatgtgatattgtctccaggtagatggtgtaagatttgagttaaatc
acaggtcacttcccgggcttccactgtgatactgctggcttgatggtgca
gaggaagatccacaccttttgaattcagagctccattgtgttgatttttg
tgttgtgagattaaaacatgaatatacatttagtgaggagtcatggcaca
gggtccttacactgtagcctaagctgggtcttaaaatcatggtagtctcc
ctacctcagcctccagagcattagaaaagtgagagccaccatgcctggct
aggaacatcatgtgtttaaatacttggccatagggagtggcactattagg
aggtgtggccctgttgcagtaagcaagggcttggaggaagtgttttgctg
tgggggtaggctttgaagtcacctatgctcaagctacagccagtgtggca
gaccatcttctgctgcctccggatggagatgtaaaattctcagcttgtct
cagcaccatgttctgcctgcacactgccatgtttccttgccatggatata
attgatggatctggggctggggagatgctcaatgggtaagagcccccggt
tgcctttccgaagtctaattctaatccagcacccacatggtggctcaaac
catcctaacaagaatctgaattcctctggaggttccgagacgctacggta
cctttacaatacttagaaataatctctcgtatacaaaaaattatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_134938612_134939534
seq2: B6Ng01-044C06.b_44_964

seq1  GAATTCCTGTGATAACAAGCATCCTTCCCGTTAATAGCAACGGGTCTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTGATAACAAGCATCCTTCCCGTTAATAGCAACGGGTCTCTT  50

seq1  GTTGATAGGAACTTAAAAGCTGCTTTTGTTTCTGACAAAACTGGAAGACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGATAGGAACTTAAAAGCTGCTTTTGTTTCTGACAAAACTGGAAGACC  100

seq1  GTAAGAAGGAATATAAACCCTGCTGCACACTGGAGCTGGACAAAGAGGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGAAGGAATATAAACCCTGCTGCACACTGGAGCTGGACAAAGAGGGC  150

seq1  CCTAAGTTCCAGGAATGTTCTGTTAGCAACCAGAGTTGTCAGAAGGGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAGTTCCAGGAATGTTCTGTTAGCAACCAGAGTTGTCAGAAGGGAAA  200

seq1  CTGTGCTGATAGAGTGGGTCCCATCTGGGGACCAGGAATGTACACCTGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCTGATAGAGTGGGTCCCATCTGGGGACCAGGAATGTACACCTGGG  250

seq1  ATCCTCAGCAGCCCCTGTCTCACTGGCAATGACAATGGGCTGTGGAGAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCAGCAGCCCCTGTCTCACTGGCAATGACAATGGGCTGTGGAGAGT  300

seq1  GGTGGTGTTGTGGTCTTACTGTTTAATGAGGTTTTGTACCTCCGTTATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGTGTTGTGGTCTTACTGTTTAATGAGGTTTTGTACCTCCGTTATAA  350

seq1  CCAACCCTCCCTCACCGTACCACCCACTCAAAGTGTTGTACTAGAAGGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACCCTCCCTCACCGTACCACCCACTCAAAGTGTTGTACTAGAAGGCC  400

seq1  TGCTGTTTGCTTGATCCCAGAAGTATAGCCAGGGGCCACTGCCAGTGTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTTTGCTTGATCCCAGAAGTATAGCCAGGGGCCACTGCCAGTGTCT  450

seq1  CCTCACCCACAGTGAGACACTAACTGGTTCCCATGGCCAAGTGTATGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACCCACAGTGAGACACTAACTGGTTCCCATGGCCAAGTGTATGAAG  500

seq1  AGAGTTGAAACCGAGATAGGCTGTTTCTGAAGGTGGAGCTGGGAAGGAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTGAAACCGAGATAGGCTGTTTCTGAAGGTGGAGCTGGGAAGGAGT  550

seq1  CATACCTCAAATCTTTCTCGAAGGCAAAAGCTGCTCTTCCAGGTCAACAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACCTCAAATCTTTCTCGAAGGCAAAAGCTGCTCTTCCAGGTCAACAA  600

seq1  ACAACACTGCCCTCATCTTATACGGGAGATTAGATGGCGGCTCTATAGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACACTGCCCTCATCTTATACGGGAGATTAGATGGCGGCTCTATAGGC  650

seq1  GAAGGCCTTCTCTATGGCTCCCCATGGCGGATCCCGATGAAAAGAGACAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCCTTCTCTATGGCTCCCCATGGCGGATCCCGATGAAAAGAGACAG  700

seq1  TTCATGGTTTTAAGGCATTCATTGTCATGGCGTCAAGTGGATGAGTAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGGTTTTAAGGCATTCATTGTCATGGCGTCAAGTGGATGAGTAAAA  750

seq1  CTGTACCCCACTTTTCAGGACGGTCCTGAGGTTAAATATCTTTTGCAGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACCCCACTTTTCAGGACGGTCCTGAGGTTAAATATCTTTTGCAGGG  800

seq1  AGGAGTGTCTGGGAAGGGGAGTTTATTGGTAAGCCTCCAGGCCTTTAGGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTGTCTGGGAAGGGGAGTTTATTGGTAAGCCTCCAGGCCTTTAGGT  850

seq1  ACCTCATTAAAATGGAGATGTCTTGAGGCTAGCAGACCACAGGTCACGTC  900
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  ACCTCATTAAAATGGAGATGTCTTGAGGCT-GCAGACCACAGGTCACGTC  899

seq1  CTCTACATATGGAGGGGCTTGGA  923
      |||||| |||||| |||||||||
seq2  CTCTACTTATGGA-GGGCTTGGA  921