BAC Information

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BAC

Clone NameB6Ng01-044H03
Chromosome6 (Build37)
Map Location 18,835,422 - 18,835,968
singlet/doubletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-044H03.b
ACCDH870195
length988
definitionDH870195|Mus musculus domesticus DNA, BAC clone: B6Ng01-044H03, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagtacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttggctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tccacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctcggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
aatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttggtcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcaggacttgaagtttttatcatac
agatctttcacttccttcgttagagtcacgccgagatatttatattattt
gtggctattgagaaggtgttgtttccctatttctttct
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835422_18835968
seq2: B6Ng01-044H03.b_45_592 (reverse)

seq1  AATGGAATAGAATTGAAGACCCAGAGATGAACCCACACACCTATGGTCAC  50
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AATGGAATAGAATTGAAGACCCAGAAATGAACCCACACACCTATGGTCAC  50

seq1  TTGATCTTCGACAAGGGAGCTAAAACCATCCAGTGGAAGAAAGACAGCAT  100
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TTGATCTTCGACAAGGGAGCCAAAACCATCCAGTGGAAGAAAGACAGCAT  100

seq1  TTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCTTGTAGAAGAATGT  150
      |||||||||||||||||||||||||||||||||||| |||||||||||| 
seq2  TTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCATGTAGAAGAATGC  150

seq1  GAATCGATCCATACTTATCTCCATGTACTAAGGTCAAATCTAAGTGGATC  200
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GAATCGATCCATACTTATCTCCTTGTACTAAGGTCAAATCTAAGTGGATC  200

seq1  AAGGAACTTCACATAAAACCAGAGACACTGAAACTTATAGAGGAGAAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAACTTCACATAAAACCAGAGACACTGAAACTTATAGAGGAGAAAGT  250

seq1  GGGGAAAAGCCTTGAAGATATGGGCAGAGGGGAAAAGTTCCTGAACAGAA  300
      |||||||||||||||||||||||||| ||||||||| |||||||||||||
seq2  GGGGAAAAGCCTTGAAGATATGGGCACAGGGGAAAAATTCCTGAACAGAA  300

seq1  CAGCAATGGC-TGTGCTGTGAGGTAGAGAATCGACAAATGGGACCTAATG  349
      |||||||||| ||| |||| || | |||||| ||||||||||||||||||
seq2  CAGCAATGGCTTGTACTGTAAGATCGAGAATTGACAAATGGGACCTAATG  350

seq1  AAACTCCAAAGTTTCTGCAAGGCAAAAGACACCGTCAATAAGACAAAAAG  399
      |||||||||||||||||||||||||||||||| ||| |||||||||||||
seq2  AAACTCCAAAGTTTCTGCAAGGCAAAAGACACTGTCTATAAGACAAAAAG  400

seq1  ACCACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGG  449
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  ACCACCAACAGACTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGG  450

seq1  GACTAATATCCAACATATATAAAGAACTCAAGAAGGTGGACTTCAGAAAA  499
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GACTAATATCCAACATATATAAAGAACTCAAGAAGGTGGACCTCAGAAAA  500

seq1  TCAAATAACCCCATTAATAAATGGGGCTCAGAACTGAACAAAGAATTC  547
      |||||||||||| |||| ||||||||||||||||||||||||||||||
seq2  TCAAATAACCCCCTTAAAAAATGGGGCTCAGAACTGAACAAAGAATTC  548