BAC Information

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BAC

Clone NameB6Ng01-046P04
Chromosome6 (Build37)
Map Location 138,523,958 - 138,524,906
singlet/doubletsinglet
Overlap geneLmo3
Upstream geneEps8, Strap, Dera, 9830102E05Rik, Mgst1
Downstream geneIgbp1b, EG668196, EG632971
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-046P04.bB6Ng01-046P04.g
ACCDH871957DH871958
length470943
definitionDH871957|Mus musculus domesticus DNA, BAC clone: B6Ng01-046P04, 5' end.DH871958|Mus musculus domesticus DNA, BAC clone: B6Ng01-046P04, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ctgatcttccctcttctaccttccaagtgctgagatcacaagaatgtgcc
cctatatctaaatatttatttttatttaccagcagactaaatacaattaa
ttatcttataaaatttgtcctatagaccaaatagttatgaatagatatat
ccccaaatggatttcatgagattattaagcaaatctcaattgtttagaat
ccagtctgttctacatagagagttttaggctaaccagggctatgtagtgc
aactgtgccagaaaaagaagaatgaggaggaggaagagaagaagaatagg
aagaagaagaagaaaagaagaagaaggaggaggaggagaaggaggaggag
aaggagaagaagaggaagaagagagaagaggaagaaggaagaagaggatt
atgaagaggaagaggaggaggaagaataagaacaaaaaaatggttcaata
ttgttgagttcgagattgat

gaattccttatttggctctgagccccatttttttaatggggttatttgat
tttctggagtccaccttcctgagttctttatatatattggatattagtcc
cctatctgattgaggataggtaaagatcctttcccaatctgttggtggcc
tttttgtcttattgatggtgtcttttgccttacagaagctttgcagtttc
atgaggtcgcatttgtcgattctcgatcttatagcacaagccattgctgt
tctattctggaatttttccccttgcttgaaaaattgttttccagcctttc
actctgaggtagtgtctgtctttttccctgatatgggtttcctgtaagca
gcacttaacatcagggcctttgtcccagcaagtgggagctcagatgtaag
caggtctgagtgttctagccttcttgtcatgttactaagctctggcaatt
gtgtttactgaagtccatgtcagatgaaaacagacagtggatgtgtcctg
ttctacatctgtgacagtacacgaaacacccagaactcttatagctgaat
tgaaattaatatagatatagagtcatggcctagtcccttttctctctctc
tctccatccctctctcatttcctccctccctcccatccctcctctctctg
tctccttgcctccttgcctctctgtctttctgtgtatgcattatctctct
ctcttgctctctgtctctctgtctctaccttcattttcaccaactcaaaa
tgaggacaatgcttcaaagtttgcttactgaagtttgcactcaatttctt
tgggaaaaatttcagttacagaggatctaactgctcagctacaggcaatg
tagattccataggatccctgctaactgaagattgacacttcatgtagtat
ctgtcagtgaaatgtatctttgcatgctgcccagtgagagagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_138523958_138524906
seq2: B6Ng01-046P04.g_66_1008

seq1  GAATTCCTTATTTGGCTCTGAGCCCCATTTTTTTAATGGGGTTATTTGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTATTTGGCTCTGAGCCCCATTTTTTTAATGGGGTTATTTGAT  50

seq1  TTTCTGGAGTCCACCTTCCTGAGTTCTTTATATATATTGGATATTAGTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGGAGTCCACCTTCCTGAGTTCTTTATATATATTGGATATTAGTCC  100

seq1  CCTATCTGATTGAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATCTGATTGAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGCC  150

seq1  TTTTTGTCTTATTGATGGTGTCTTTTGCCTTACAGAAGCTTTGCAGTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTCTTATTGATGGTGTCTTTTGCCTTACAGAAGCTTTGCAGTTTC  200

seq1  ATGAGGTCGCATTTGTCGATTCTCGATCTTATAGCACAAGCCATTGCTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGTCGCATTTGTCGATTCTCGATCTTATAGCACAAGCCATTGCTGT  250

seq1  TCTATTCTGGAATTTTTCCCCTTGCTTGAAAAATTGTTTTCCAGCCTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTCTGGAATTTTTCCCCTTGCTTGAAAAATTGTTTTCCAGCCTTTC  300

seq1  ACTCTGAGGTAGTGTCTGTCTTTTTCCCTGATATGGGTTTCCTGTAAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGAGGTAGTGTCTGTCTTTTTCCCTGATATGGGTTTCCTGTAAGCA  350

seq1  GCACTTAACATCAGGGCCTTTGTCCCAGCAAGTGGGAGCTCAGATGTAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTTAACATCAGGGCCTTTGTCCCAGCAAGTGGGAGCTCAGATGTAAG  400

seq1  CAGGTCTGAGTGTTCTAGCCTTCTTGTCATGTTACTAAGCTCTGGCAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCTGAGTGTTCTAGCCTTCTTGTCATGTTACTAAGCTCTGGCAATT  450

seq1  GTGTTTACTGAAGTCCATGTCAGATGAAAACAGACAGTGGATGTGTCCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTACTGAAGTCCATGTCAGATGAAAACAGACAGTGGATGTGTCCTG  500

seq1  TTCTACATCTGTGACAGTACACGAAACACCCAGAACTCTTATAGCTGAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACATCTGTGACAGTACACGAAACACCCAGAACTCTTATAGCTGAAT  550

seq1  TGAAATTAATATAGATATAGAGTCATGGCCTAGTCCCTTTTCTCTCTCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATTAATATAGATATAGAGTCATGGCCTAGTCCCTTTTCTCTCTCTC  600

seq1  TCTCCATCCCTCTCTCATTTCCTCCCTCCCTCCCATCCCTCCTCTCTCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCATCCCTCTCTCATTTCCTCCCTCCCTCCCATCCCTCCTCTCTCTG  650

seq1  TCTCCTTGCCTCCTTGCCTCTCTGTCTTTCTGTGTATGCATTATCTCTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTTGCCTCCTTGCCTCTCTGTCTTTCTGTGTATGCATTATCTCTCT  700

seq1  CTCTTGCTCTCTGTCTCTCTGTCTCTACCTTCATTTTCACCAACTCAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGCTCTCTGTCTCTCTGTCTCTACCTTCATTTTCACCAACTCAAAA  750

seq1  TGAGGACAATGCTTCAAAGTTTGCTTACTGAAGTTTGCACTCAATTTTCT  800
      |||||||||||||||||||||||||||||||||||||||||||||||   
seq2  TGAGGACAATGCTTCAAAGTTTGCTTACTGAAGTTTGCACTCAATTT--C  798

seq1  TTTGGGAAAAATTTCAGTTACAGAGGATCTAACTGCTCAGCTACAGGCAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGAAAAATTTCAGTTACAGAGGATCTAACTGCTCAGCTACAGGCAA  848

seq1  TGTAAGATTCCATAGGATCCCTGCTAACTGAAGATTGACACTTCATGTAG  900
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGT-AGATTCCATAGGATCCCTGCTAACTGAAGATTGACACTTCATGTAG  897

seq1  TATCTGTCAGTGAAAATGTATCTTTGCATGCCTGCCCCAGTGAGAGAGG  949
      |||||||||||| ||||||||||||||||| ||| ||||||||||||||
seq2  TATCTGTCAGTG-AAATGTATCTTTGCATG-CTG-CCCAGTGAGAGAGG  943


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