BAC Information

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BAC

Clone NameB6Ng01-048O05
Chromosome6 (Build37)
Map Location 10,656,577 - 10,657,478
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC330264
Downstream geneLOC100040285, LOC667650, AA545190
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-048O05.bB6Ng01-048O05.g
ACCDH873312DH873313
length8961,158
definitionDH873312|Mus musculus domesticus DNA, BAC clone: B6Ng01-048O05, 5' end.DH873313|Mus musculus domesticus DNA, BAC clone: B6Ng01-048O05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctccttaaatgctagttttccacaatttctatgaaagtttctagt
gaattatagaggaaaaaatgaggcaaaacatgaacatggaatattgtctt
taatgtgaaagtattgtgttagcactttccattaactgtttcagttgaat
cttaggtacttgcagttggcattaaatgtcttaggctaattgtcactgaa
gaggattatgtctttaaattgagtatgaataactatgtgttaaggaattt
agtcaagtacatggaattctttcctcttcatgccctaattagatatttct
ttaatatgaatactacaacgagatttttctaggtctttttcattgcctaa
gttcaagctcacatctacatatttataagctagttccaccaacatttcaa
aacttgctacaaaaaacaacaataacaacaacaacaaaaaaaaacaaaaa
caaaaacctccatgccctgtaaggtttgtggtgtcttgagtctgcccagc
cactgggcttgggccactcagggaggcaggatatgtaaagttgtgactgt
gctaaccccacaccaaccacaccaatgctgagcaggtgtcagactatagg
aagccacaagacaccactctgggggttggcgagcaaagtctgaggtctcc
aggaaaaagagagagctggctctgtggtccccagtcctgcagagaggcca
taaacaattgtttctcatgctcttgggcacccaggagcaacgggggtcta
aaggggaaaagagggaagagttcagctaggttccacagggagaggagtcc
ttggcttgtcacagtggcttggcttgtggagccgtggtagggagccctga
gaggtctgtgggagataggccacagctctttaagcaaagatctgtt
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccaccttacaccagtcagaatggctaagataaaaaattcaggtgacagc
agatgcttgtgaggatgtgaagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagtcagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcatctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcataaa
gaaactcacacaatatgtattcactgataagtggatattagcctcaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccacctcataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattggaa
aggacgcagattgtagctgtctcttgtgagactatgccggggcccgacaa
accacagagtggatgctcacagtcagctaatggatggatcatagggctcc
caatggaggagctaagaaagtagcaagagctaaagggatctgcatcctta
ggtggaacaacatatgagctaacagtaccccgagctctgaccttgctggc
tatatatcaaagatgctagtcggctcatcggaagagaggctcatagactg
ctacctttatatgccactaggaattccaggctacaggggatggtgatgca
aggatgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_10656577_10657478
seq2: B6Ng01-048O05.b_45_940

seq1  GAATTCTCCTTAAATGCTAGTTTTCCACAATTTCTATGAAAGTTTCTAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTTAAATGCTAGTTTTCCACAATTTCTATGAAAGTTTCTAGT  50

seq1  GAATTATAGAGGAAAAAATGAGGCAAAACATGAACATGGAATATTGTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTATAGAGGAAAAAATGAGGCAAAACATGAACATGGAATATTGTCTT  100

seq1  TAATGTGAAAGTATTGTGTTAGCACTTTCCATTAACTGTTTCAGTTGAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTGAAAGTATTGTGTTAGCACTTTCCATTAACTGTTTCAGTTGAAT  150

seq1  CTTAGGTACTTGCAGTTGGCATTAAATGTCTTAGGCTAATTGTCACTGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGTACTTGCAGTTGGCATTAAATGTCTTAGGCTAATTGTCACTGAA  200

seq1  GAGGATTATGTCTTTAAATTGAGTATGAATAACTATGTGTTAAGGAATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATTATGTCTTTAAATTGAGTATGAATAACTATGTGTTAAGGAATTT  250

seq1  AGTCAAGTACATGGAATTCTTTCCTCTTCATGCCCTAATTAGATATTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAAGTACATGGAATTCTTTCCTCTTCATGCCCTAATTAGATATTTCT  300

seq1  TTAATATGAATACTACAACGAGATTTTTCTAGGTCTTTTTCATTGCCTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATATGAATACTACAACGAGATTTTTCTAGGTCTTTTTCATTGCCTAA  350

seq1  GTTCAAGCTCACATCTACATATTTATAAGCTAGTTCCACCAACATTTCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAAGCTCACATCTACATATTTATAAGCTAGTTCCACCAACATTTCAA  400

seq1  AACTTGCTACAAAAAACAACAATAACAACAACAACAAAAAAAAACAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGCTACAAAAAACAACAATAACAACAACAACAAAAAAAAACAAAAA  450

seq1  CAAAAACCTCCATGCCCTGTAAGGTTTGTGGTGTCTTGAGTCTGCCCAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAACCTCCATGCCCTGTAAGGTTTGTGGTGTCTTGAGTCTGCCCAGC  500

seq1  CACTGGGCTTGGGCCACTCAGGGAGGCAGGATATGTAAAGTTGTGACTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGGCTTGGGCCACTCAGGGAGGCAGGATATGTAAAGTTGTGACTGT  550

seq1  GCTAACCCCACACCAACCACACCAATGCTGAGCAGGTGTCAGACTATAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAACCCCACACCAACCACACCAATGCTGAGCAGGTGTCAGACTATAGG  600

seq1  AAGCCACAAGACACCACTCTGGGGGTTGGCGAGCAAAGTCTGAGGTCTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCACAAGACACCACTCTGGGGGTTGGCGAGCAAAGTCTGAGGTCTCC  650

seq1  AGGAAAAAGAGAGAGCTGGCTCTGTGGTCCCCAGTCCTGCAGAGAGGCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAAAGAGAGAGCTGGCTCTGTGGTCCCCAGTCCTGCAGAGAGGCCA  700

seq1  TAAACAATTGTTTCTCAGGCTCTTGGGCACCCAGGAGCAACGGGGGTCT-  749
      ||||||||||||||||| ||||||||||||||||||||||||||||||| 
seq2  TAAACAATTGTTTCTCATGCTCTTGGGCACCCAGGAGCAACGGGGGTCTA  750

seq1  AAGGGGAAAAGAGGGAAGAGTTCAGCTAGGTTCCACAGGGAGAGGAGTCC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGGAAAAGAGGGAAGAGTTCAGCTAGGTTCCACAGGGAGAGGAGTCC  800

seq1  TTGGCTTGTTCACAGGTGGCTTGGCTTGGTGGAGGCCGTGGTAGGGAGCC  849
      |||||||| ||||| |||||||||||| ||||| ||||||||||||||||
seq2  TTGGCTTG-TCACA-GTGGCTTGGCTT-GTGGA-GCCGTGGTAGGGAGCC  846

seq1  CTGAGAGGTTCTGTGGGAGATTAGGCCACAGGCTCTTTAGGCAAAGATCT  899
      |||||||| ||||||||||| ||||||||| |||||||| ||||||||||
seq2  CTGAGAGG-TCTGTGGGAGA-TAGGCCACA-GCTCTTTAAGCAAAGATCT  893

seq1  GTT  902
      |||
seq2  GTT  896