BAC Information

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BAC

Clone NameB6Ng01-050A23
Chromosome6 (Build37)
Map Location 131,114,696 - 131,115,499
singlet/doubletsinglet
Overlap geneEG434094
Upstream geneLOC100038894, Klra9, Klra7, LOC100038898, Klra12, Klra10, Klra13, Klra3, Klra1, LOC100038902, LOC100038903, LOC625436, EG625473, LOC640779, LOC667793, EG667798, EG625558, LOC625566, EG636947, LOC625628, EG625648, LOC667830
Downstream geneKlra2, LOC434095, 2010012C16Rik, Styk1, Csda, LOC625758, 5430401F13Rik, LOC625781, Tas2r130, Tas2r107, Tas2r106, Tas2r104, Tas2r105, Tas2r114, LOC639802, EG114600
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-050A23.bB6Ng01-050A23.g
ACCDH874122DH874123
length8001,157
definitionDH874122|Mus musculus domesticus DNA, BAC clone: B6Ng01-050A23, 5' end.DH874123|Mus musculus domesticus DNA, BAC clone: B6Ng01-050A23, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatttttaaatcactcaataaacagtatcctaaagtgtaaggatt
ttaaccagaataatagtaataactatgctaacacaatcatgttgcataat
gtttatagtttagtaaggaaggttattagtatttatgagatatattctct
ttgaagattattgtgttcttagtctttgaactttttaaagagtaattttt
aatctctaatccctccttgtcacaattatcaataaatacatttgaactgt
ctattactattgcctaggtttatttagtgttcattttattctgggtgaat
tcattcatattttccagtgtctgattgataatgccaacagaaacatgtta
caaaaaataaattggattgcttttgacaaattctaagaccacagttctga
agtgtgtatgtgttgagcagagaaaacccatgattttcctgagtatgtat
gtgtgtgttttttatgcataaaatcacttgtattacaaggaacatagttt
ctgttccagggcaaaattctaagtagacccaatggatggggaagaggttg
aagctttaagattacaactcctcctctgttcaaaatgttcatgttcatag
tgcattcttcatattgtccacaatagaattctcactcccttttttttttc
ccgaatcacaggaggtctcaaaatatgattaaaagggaaaggccctcttt
tacttattgcaaatgatatatatttagtacttgagtctctgcttgccatt
ttggatttcaagcaacagtacaggacattgagggtattgaattacatttt

gaattctcacctgaggaatactgaatggctgagaagcacctgaaaaaaaa
aatgttcaccatccttaatcatcatggaaatgcaaatcaaagcaactctg
agattcaacctcacaccagttagaatgtctaagataaaaagttcaggtga
cagcagatgctggcgaggatgtggagaaagaggaacactcctccattgtt
ggtgggagtgcaggcttgtacaaccactctggaaatcagtctggcggttc
ctcagaaaactggacatagtactaccggaggatccagcaatacctctcct
gggcatatatccagaagatgccccaacaggtaagaaggacacatgctcca
ctatgttcatagcagccttatttataatagccagaagctggaaagaacct
agatgcccctcaacagaggaatggatacagaaaatgtggtacatctacac
aatggagtactactcagctattaaaaagaatgaatttatgaaattcctag
ccaaatggatggacctggagggcatcatcctgagtgaggtaacacattca
caaagaaactcacacaatatgtattcactgataagtggatattagcccca
aacctaggatacccaagatataagatataatttgctaaacacatgaaact
caaggagaatgaagactgaagtgtggacactatgccccttcttagatttg
ggaacaaaacacccatggaaaggagttacagagacggagtttggagctga
gatgaaaggatggaccatgtagatactgccatagccagggatccacccca
taatcagcatccaaacgctgacaccattgtatacactagcagattttatt
gaaaggacgcagatgtagctgtctcttgtgagactatgccggggcccagc
aacaagagtgatgctcacagtcagctatgatgatcatagggctcctatga
gagctagagaagtagccagagctaaagggattgcaccttataagtagaca
catatgaactacagtaccgagctcttgtctctagcctgcatatattcaaa
gatgcctgatggcatcacttgtaagaaaggctatgaactgcaaactttaa
tgcctcagtatcacggataccatggccaaaaagggaatgtgttgtgctga
acgatgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_131114696_131115499
seq2: B6Ng01-050A23.b_40_839 (reverse)

seq1  AAAATGTAATTCAAATACCCTCAATGTCCTTGTACTGTTTGCTTGAAATC  50
      |||||||||||| |||||||||||||||| ||||||| ||||||||||||
seq2  AAAATGTAATTC-AATACCCTCAATGTCC-TGTACTG-TTGCTTGAAATC  47

seq1  CAAAATGGCAAGCAGAGACTCAAGTACTAAATATATTATCATTTGCAATA  100
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CAAAATGGCAAGCAGAGACTCAAGTACTAAATATA-TATCATTTGCAATA  96

seq1  AGTAAAAGAGGGCCTTTCCCTTTTAATCATATTTTGAGACCTCCTGTGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAAGAGGGCCTTTCCCTTTTAATCATATTTTGAGACCTCCTGTGAT  146

seq1  TCGGGAAAAAAAAAAAGGAGTGAGAATTCTATTGTGGACAATATGAAGAA  200
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TCGGGAAAAAAAAAAGGGAGTGAGAATTCTATTGTGGACAATATGAAGAA  196

seq1  TGCACTATGAACATGAACATTTTGAACAGAGGAGGAGTTGTAATCTTAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTATGAACATGAACATTTTGAACAGAGGAGGAGTTGTAATCTTAAA  246

seq1  GCTTCAACCTCTTCCCCATCCATTGGGTCTACTTAGAATTTTGCCCTGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCAACCTCTTCCCCATCCATTGGGTCTACTTAGAATTTTGCCCTGGA  296

seq1  ACAGAAACTATGTTCCTTGTAATACAAGTGATTTTATGCATAAAAAACAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAACTATGTTCCTTGTAATACAAGTGATTTTATGCATAAAAAACAC  346

seq1  ACACATACATACTCAGGAAAATCATGGGTTTTCTCTGCTCAACACATACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATACATACTCAGGAAAATCATGGGTTTTCTCTGCTCAACACATACA  396

seq1  CACTTCAGAACTGTGGTCTTAGAATTTGTCAAAAGCAATCCAATTTATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCAGAACTGTGGTCTTAGAATTTGTCAAAAGCAATCCAATTTATTT  446

seq1  TTTGTAACATGTTTCTGTTGGCATTATCAATCAGACACTGGAAAATATGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAACATGTTTCTGTTGGCATTATCAATCAGACACTGGAAAATATGA  496

seq1  ATGAATTCACCCAGAATAAAATGAACACTAAATAAACCTAGGCAATAGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATTCACCCAGAATAAAATGAACACTAAATAAACCTAGGCAATAGTA  546

seq1  ATAGACAGTTCAAATGTATTTATTGATAATTGTGACAAGGAGGGATTAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGACAGTTCAAATGTATTTATTGATAATTGTGACAAGGAGGGATTAGA  596

seq1  GATTAAAAATTACTCTTTAAAAAGTTCAAAGACTAAGAACACAATAATCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAAAAATTACTCTTTAAAAAGTTCAAAGACTAAGAACACAATAATCT  646

seq1  TCAAAGAGAATATATCTCATAAATACTAATAACCTTCCTTACTAAACTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGAGAATATATCTCATAAATACTAATAACCTTCCTTACTAAACTAT  696

seq1  AAACATTATGCAACATGATTGTGTTAGCATAGTTATTACTATTATTCTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATTATGCAACATGATTGTGTTAGCATAGTTATTACTATTATTCTGG  746

seq1  TTAAAATCCTTACACTTTAGGATACTGTTTATTGAGTGATTTAAAAATGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATCCTTACACTTTAGGATACTGTTTATTGAGTGATTTAAAAATGA  796

seq1  ATTC  804
      ||||
seq2  ATTC  800