BAC Information

Click to search

BAC

Clone NameB6Ng01-050N04
Chromosome6 (Build37)
Map Location 19,466,438 - 19,508,505
singlet/doubletdoublet
Overlap genenone
Upstream geneEG545829, Lsm8, Ankrd7, LOC626180, Eif3s6-ps4
Downstream geneLOC100040838
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-050N04.bB6Ng01-050N04.g
ACCDH874653DH874654
length99893
definitionDH874653|Mus musculus domesticus DNA, BAC clone: B6Ng01-050N04, 5' end.DH874654|Mus musculus domesticus DNA, BAC clone: B6Ng01-050N04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(19,466,438 - 19,466,536)(19,507,966 - 19,508,505)
sequence
aaagacagattcgggtaatatacttgattaagaatttttgacatttattt
gtacattcatttgtgtgtgtgtgtgtgtgagtgagtgtgtgtgtgtttg
gaattcttttgactttcaaagttcttattttactgaacctgactttttgt
acttttcttctcattaattattgtgacactattataatcacttcttcttg
ctcagcttcattgtatcctgaaactaatcatgaactcattccatagcttg
tggttgccatgaataaatggctctcagaagttggatttttagtggttgag
aatttttcaaggaggcctgaaatgaattatggccatatagaggttgtgtt
tgctaaatgtgcctctttttgattgactttggagtgaatgaaagaaaggt
ttgaaaactttctgctttcaagtgcaagtggtgatggtgatttttcaggc
tatactatgtatcctctgtcatgggaatcatcttaagaaataaaacccag
gggagctcagtagttcagaatcaggtctgcatttccagaggatgactgct
cagttcctagtttctgtattgggtagtttacaactgcctaggggtcagct
tccgggacccactgccttggcttctgtagttacacacccatatcagatac
accagcatgcgcacgattaagtataaaataattaaaatagataaacaaag
cacagacatgctgaatttaagccagattgtttgattctgttatttagaga
tagattcccccaaataaatatttttatcaaaatttcaaaagtggctggtg
taattttttaaatttaattttatttttaatttatttgtttacactccata
ttacattccctgtcccatcatccatcctcccactgctccacattccacac
ctcctccccacccctacccatctccacgtggatgctcccacacacacacc
tgacctctaaactccctggggcatccagtcttttgatggttct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_19466438_19466536
seq2: B6Ng01-050N04.b_50_148

seq1  AAAGACAGATTCGGGTAATATACTTGATTAAGAATTTTTGACATTTATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACAGATTCGGGTAATATACTTGATTAAGAATTTTTGACATTTATTT  50

seq1  GTACATTCATTTGTGTGTGTGTGTGTGTGAGTGAGTGTGTGTGTGTTTG  99
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATTCATTTGTGTGTGTGTGTGTGTGAGTGAGTGTGTGTGTGTTTG  99

seq1: chr6_19507966_19508505
seq2: B6Ng01-050N04.g_67_606 (reverse)

seq1  TGGGTGTGTAACTACAGAAGCCAAGGCAGTGGGTCCCGGAAGCTGACCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGTGTAACTACAGAAGCCAAGGCAGTGGGTCCCGGAAGCTGACCCC  50

seq1  TAGGCAGTTGTAAACTACCCAATACAGAAACTAGGAACTGAGCAGTCATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCAGTTGTAAACTACCCAATACAGAAACTAGGAACTGAGCAGTCATC  100

seq1  CTCTGGAAATGCAGACCTGATTCTGAACTACTGAGCTCCCCTGGGTTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGAAATGCAGACCTGATTCTGAACTACTGAGCTCCCCTGGGTTTTA  150

seq1  TTTCTTAAGATGATTCCCATGACAGAGGATACATAGTATAGCCTGAAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTAAGATGATTCCCATGACAGAGGATACATAGTATAGCCTGAAAAA  200

seq1  TCACCATCACCACTTGCACTTGAAAGCAGAAAGTTTTCAAACCTTTCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCATCACCACTTGCACTTGAAAGCAGAAAGTTTTCAAACCTTTCTTT  250

seq1  CATTCACTCCAAAGTCAATCAAAAAGAGGCACATTTAGCAAACACAACCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCACTCCAAAGTCAATCAAAAAGAGGCACATTTAGCAAACACAACCT  300

seq1  CTATATGGCCATAATTCATTTCAGGCCTCCTTGAAAAATTCTCAACCACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATGGCCATAATTCATTTCAGGCCTCCTTGAAAAATTCTCAACCACT  350

seq1  AAAAATCCAACTTCTGAGAGCCATTTATTCATGGCAACCACAAGCTATGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATCCAACTTCTGAGAGCCATTTATTCATGGCAACCACAAGCTATGG  400

seq1  AATGAGTTCATGATTAGTTTCAGGATACAATGAAGCTGAGCAAGAAGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGTTCATGATTAGTTTCAGGATACAATGAAGCTGAGCAAGAAGAAG  450

seq1  TGATTATAATAGTGTCACAATAATTAATGAGAAGAAAAGTACAAAAAGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTATAATAGTGTCACAATAATTAATGAGAAGAAAAGTACAAAAAGTC  500

seq1  AGGTTCAGTAAAATAAGAACTTTGAAAGTCAAAAGAATTC  540
      ||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTCAGTAAAATAAGAACTTTGAAAGTCAAAAGAATTC  540