BAC Information

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BAC

Clone NameB6Ng01-051J21
Chromosome6 (Build37)
Map Location 121,087,761 - 121,234,102
singlet/doubletdoublet
Overlap genePex26, Tuba8, Usp18
Upstream geneNinj2, B4galnt3, Ccdc77, Jarid1a, Il17ra, Cecr6, Cecr5, 1700072O05Rik, Cecr2, Slc25a18, Atp6v1e1, Bcl2l13, Bid, Mical3, LOC100043793, Minpp1-ps
Downstream geneSlc6a13, Slc6a12, Iqsec3, LOC100043486, A2m, EG640530, Mug1, Mug4, Mug2, Mug-ps1, Klrg1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-051J21.bB6Ng01-051J21.g
ACCDH875204DH875205
length477693
definitionDH875204|Mus musculus domesticus DNA, BAC clone: B6Ng01-051J21, 5' end.DH875205|Mus musculus domesticus DNA, BAC clone: B6Ng01-051J21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(121,233,620 - 121,234,102)(121,087,761 - 121,088,453)
sequence
caggtttcccacgctttttactatcgaccagaaaatatgattcccaaggt
ttaattcgtgggaaccacatgtgcgtgcccacatatatcacacatgtgcg
cttgtgcactacacacacacacacacacacacacacacacacacaattaa
ttaattacgtataacaaaaatattttccaagacacacttgatctgaattg
gaagaccatgcaatgtttagaaagtaaaagacttcatttgattaagttac
tttttctgttttgttttgttttgtttttattctttaagaatttcatacat
gaacattatgaactaaccagtaccccggagctcttgactctagctgcata
tgtatcaaaagatggcctagtcggccatcactggaaagagaggcccattg
gacttgcaaactttatatgccccagtacagggtacgccagggccaaaaag
ggagagtagatgggtaggggagtgggg
gaattcattagacaaaccaagttacatcccctcccctgtttttgagacgg
ggtcttactatgcagtgcaggttggcctccagtccaacatccttccgctt
caaaaccaggggggaggctcatactcccagtacgtgggaggtagaggcag
gccgatctctgagtttgaagacaacttgggctacatagcaaattcaagac
tataacttaaaaaaaaaaaaatccttctttttcagcctcccaagtagtgg
ggtcacaggtaggtaccactccgcccaatgggcatggatattttcagact
ctattgtttctaaccctcctctctcccgcttaccacctactcccccaaaa
tgcacaaccatcacagactctctgtaatcctactatgacctgtgtaaagg
cttgttattggtttatttagaaaaactcagtagttccttatttaaatatc
ctcaataagcaagaatgagtagaacaggttttagggagggaacgtttgag
gaagtagatgggaggaaatggtgagcttttccaagtctcatagtaaagca
gagagactggatgttggtagttcctgcacattgactctagtgatggcttt
aacccattacaaaggctaagacttacattactaagccactggttagcctt
tgatctgtgtgtgtgtgactgtgtgtataggtgtgagtgtgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_121233620_121234102
seq2: B6Ng01-051J21.b_43_525 (reverse)

seq1  CCCCACTCCCCTACCCATCTACTCTCCCTTTTTGGCCCTGGCGTACCCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACTCCCCTACCCATCTACTCTCCCTTTTTGGCCCTGGCGTACCCTG  50

seq1  TACTGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTCCAGTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTCCAGTGA  100

seq1  TGGCCGACTAGGCCATCTTTTGATACATATGCAGCTAGAGTCAAGAGCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCGACTAGGCCATCTTTTGATACATATGCAGCTAGAGTCAAGAGCTC  150

seq1  CGGGGTACTGGTTAGTTCATAATGTTCATGTATGAAATTCTTAAAGAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGGTACTGGTTAGTTCATAATGTTCATGTATGAAATTCTTAAAGAATA  200

seq1  AAAACAAAACAAAACAAAACAGAAAAAGTAACTTAATCAAATGAAGTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAAACAAAACAAAACAGAAAAAGTAACTTAATCAAATGAAGTCTT  250

seq1  TTACTTTCTAAACATTGCATGGTCTTCCAATTCAGATCAAGTGTGTCTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTTCTAAACATTGCATGGTCTTCCAATTCAGATCAAGTGTGTCTTG  300

seq1  GAAAATATTTTTGTTATACGTAATTAATTAATTGTGTGTGTGTGTGTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATATTTTTGTTATACGTAATTAATTAATTGTGTGTGTGTGTGTGTG  350

seq1  TGTGTGTGTGTGTGTGTAGTGCACAAGCGCACATGTGTGATATATGTGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTAGTGCACAAGCGCACATGTGTGATATATGTGGG  400

seq1  CACGCACATGTGGTTCCCACGAATTAAACCTTGGGAATCATATTTTCTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGCACATGTGGTTCCCACGAATTAAACCTTGGGAATCATATTTTCTGG  450

seq1  TCGATAGTAAAAAGCGTGGGAAACCTGGAATTC  483
      |||||||||||||||||||||||||||||||||
seq2  TCGATAGTAAAAAGCGTGGGAAACCTGGAATTC  483

seq1: chr6_121087761_121088453
seq2: B6Ng01-051J21.g_68_760

seq1  GAATTCATTAGACAAACCAAGTTACATCCCCTCCCCTGTTTTTGAGACGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTAGACAAACCAAGTTACATCCCCTCCCCTGTTTTTGAGACGG  50

seq1  GGTCTTACTATGCAGTGCAGGTTGGCCTCCAGTCCAACATCCTTCCGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTTACTATGCAGTGCAGGTTGGCCTCCAGTCCAACATCCTTCCGCTT  100

seq1  CAAAACCAGGGGGGAGGCTCATACTCCCAGTACGTGGGAGGTAGAGGCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACCAGGGGGGAGGCTCATACTCCCAGTACGTGGGAGGTAGAGGCAG  150

seq1  GCCGATCTCTGAGTTTGAAGACAACTTGGGCTACATAGCAAATTCAAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGATCTCTGAGTTTGAAGACAACTTGGGCTACATAGCAAATTCAAGAC  200

seq1  TATAACTTAAAAAAAAAAAAATCCTTCTTTTTCAGCCTCCCAAGTAGTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACTTAAAAAAAAAAAAATCCTTCTTTTTCAGCCTCCCAAGTAGTGG  250

seq1  GGTCACAGGTAGGTACCACTCCGCCCAATGGGCATGGATATTTTCAGACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCACAGGTAGGTACCACTCCGCCCAATGGGCATGGATATTTTCAGACT  300

seq1  CTATTGTTTCTAACCCTCCTCTCTCCCGCTTACCACCTACTCCCCCAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTGTTTCTAACCCTCCTCTCTCCCGCTTACCACCTACTCCCCCAAAA  350

seq1  TGCACAACCATCACAGACTCTCTGTAATCCTACTATGACCTGTGTAAAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAACCATCACAGACTCTCTGTAATCCTACTATGACCTGTGTAAAGG  400

seq1  CTTGTTATTGGTTTATTTAGAAAAACTCAGTAGTTCCTTATTTAAATATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTATTGGTTTATTTAGAAAAACTCAGTAGTTCCTTATTTAAATATC  450

seq1  CTCAATAAGCAAGAATGAGTAGAACAGGTTTTAGGGAGGGAACGTTTGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAATAAGCAAGAATGAGTAGAACAGGTTTTAGGGAGGGAACGTTTGAG  500

seq1  GAAGTAGATGGGAGGAAATGGTGAGCTTTTCCAAGTCTCATAGTAAAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTAGATGGGAGGAAATGGTGAGCTTTTCCAAGTCTCATAGTAAAGCA  550

seq1  GAGAGACTGGATGTTGGTAGTTCCTGCACATTGACTCTAGTGATGGCTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGACTGGATGTTGGTAGTTCCTGCACATTGACTCTAGTGATGGCTTT  600

seq1  AACCCATTACAAAGGCTAAGACTTACATTACTAAGCCACTGGTTAGCCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCATTACAAAGGCTAAGACTTACATTACTAAGCCACTGGTTAGCCTT  650

seq1  TGATCTGTGTGTGTGTGACTGTGTGTATAGGTGTGAGTGTGCA  693
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTGTGTGTGTGTGACTGTGTGTATAGGTGTGAGTGTGCA  693