BAC Information

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BAC

Clone NameB6Ng01-055K08
Chromosome6 (Build37)
Map Location 74,846,028 - 74,847,049
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneEG668132, LOC668136, LOC621306, LOC100042942, LOC668143, EG668145
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-055K08.bB6Ng01-055K08.g
ACCDH878033DH878034
length1,0161,264
definitionDH878033|Mus musculus domesticus DNA, BAC clone: B6Ng01-055K08, 5' end.DH878034|Mus musculus domesticus DNA, BAC clone: B6Ng01-055K08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaactaaggcacagaacaaggagccacaactctcagaagtactg
agtacaattcccctcgttatcccagaattatcaaggaatagtaaatattt
aaaacctaaaaataaatgtaatttcaaaaaaaaggaaatgaagtgcatca
cacacaaaagtaacttttacataatatcatagaacattcccaaaagtttg
atatgagagtgcaagacatattcatgatgttgatcttcaagcattgattt
tgaagattggcatcaaataaaaacatcaacatataatgtattaataatat
ataatatatggacatcatttactaattatttcttaatatctggaatagat
accaaatgggacatgtaatagttaggggacagtgttccttgtttgtacgt
aagctcagttaaatatgtctaccaattcaaacactcatttatcatgataa
acttcaaagtatgttttcagagttttaaaatacacgagacaatgtcctct
gtatatgctatgctgtaactagtgcccatgtgtttccttttcttttctga
atgataacatgccgactgctaatgatacttttcacttgtcttcacaactt
ttggtaaaaaatattttgcccatgactccaatgaattaatactttaagtt
tcatctagaagaaaaaccatggcatttgactgcatctacctggcttattt
cactttgttcaacaatctccagttatagtcatggtctactttgtagatga
acttcacatatgccatttcattggcctagtagaaccaggttttctaatta
cttgcacaataaatggaataaagacaaaaaatataaaaataggaatgtgt
attcagtataaatacattaaatatgtaatagcttatgctggaaatgaaac
aattaaacatctcagtagtgtgatcccagtaatatataagcagatactta
ttgttaaagtacacaggtaggaagttttcttgtatgccacccacttctgt
atttactgcagtaagg
gaattcaacacaccactttcatcaatggacagatcatggaaacaaaaact
aaacagggacacaatgaaactaacagaagttatgaaacaagtggacttaa
cagatatctacagaacattttatcctaaaacaaaaggatataccttcttc
tcagcacctcacgggaccttctccaaaattgaccatataatttgtcacaa
aacaggcctcaagagatacaaaaatattgaaattgttccatgcatcctat
cagaccaccgtggactaacgctgatcttcaataacaacataaataatgga
aagccaacattcacatggaaactgaacaacactcttctcaatgatacatt
ggtcaaggaaggaataaagaaagaaattaaagactttttagagtttaatg
aaaatgaagccacaacatacccaaacctatgggacacaatgaaagcattt
ctaagagggaaactcatagctctgagtgcctccaaaaggaaactagagag
agcacacactagcagcttgacaacacacctaaatgctcttgaaaaaaagg
aagaaagttcacccaagaggagtagactgcaggaaataatcaaactccag
gccgaaatcaaccaagtggaaacaagaagaacaattcaaaaaattaacca
aagaaggagttggttctttgagaaaatcaaaaagatagataaacccttag
ctagactcactagtgggcacagtgacagcatcctaattaacaaaatcaga
aatgaaaagagagacataacaacagatcctggagaaatccaaaacaccat
cagatccttctacaaaaggctatactcaacaaaacttgaaacctggacga
aatgaacaaatttctagacagatactaggtaccacagttaaatcaagatc
aagtgaacgatctaaacagtaccatatcccctaaagaaatagaagcagtc
attaatagttctccaagccaaaaaaaaaaaaaaaaaaaagcccaggacca
aatgggttcaaatgggtttagtgcaaggtttgtcaaactttcaagaagac
tattccagttctgcccaaatattccacaaataagagtagagtagtccatc
gacctcatccttgaagcacattcctcgatactaacacagaagatccaacc
aagttagagacttcaacatttcctagtgaatatagtgctaatctcataat
tccgttaccgtccagaacattaggcatcttaccggacagagagtttgatc
ccaggtactcatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_74846028_74847049
seq2: B6Ng01-055K08.b_46_1061 (reverse)

seq1  CCTTACTGCAGTAAATACAGAAGTGGGTTGGCATACCAAGAAAACTTCCC  50
      ||||||||||||||||||||||||||| ||||||| ||||||||||| ||
seq2  CCTTACTGCAGTAAATACAGAAGTGGG-TGGCATA-CAAGAAAACTT-CC  47

seq1  TAACTGTTGTACTTTAATACAATAAGTATCTGCTTATATATTACTGGGAT  100
      || ||| |||||||||  ||||||||||||||||||||||||||||||||
seq2  TACCTG-TGTACTTTA--ACAATAAGTATCTGCTTATATATTACTGGGAT  94

seq1  CACACTACTGAGATGTTTAATTGTTTCATTTCCAGCATAAGCTATTACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTACTGAGATGTTTAATTGTTTCATTTCCAGCATAAGCTATTACAT  144

seq1  ATTTAATGTATTTATACTGAATACACATTCCTATTTTTATATTTTTTGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATGTATTTATACTGAATACACATTCCTATTTTTATATTTTTTGTC  194

seq1  TTTATTCCATTTATTGTGCAAGTAATTAGAAAACCTGGTTCTACTAGGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCCATTTATTGTGCAAGTAATTAGAAAACCTGGTTCTACTAGGCC  244

seq1  AATGAAATGGCATATGTGAAGTTCATCTACAAAGTAGACCATGACTATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAATGGCATATGTGAAGTTCATCTACAAAGTAGACCATGACTATAA  294

seq1  CTGGAGATTGTTGAACAAAGTGAAATAAGCCAGGTAGATGCAGTCAAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGATTGTTGAACAAAGTGAAATAAGCCAGGTAGATGCAGTCAAATG  344

seq1  CCATGGTTTTTCTTCTAGATGAAACTTAAAGTATTAATTCATTGGAGTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGTTTTTCTTCTAGATGAAACTTAAAGTATTAATTCATTGGAGTCA  394

seq1  TGGGCAAAATATTTTTTACCAAAAGTTGTGAAGACAAGTGAAAAGTATCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCAAAATATTTTTTACCAAAAGTTGTGAAGACAAGTGAAAAGTATCA  444

seq1  TTAGCAGTCGGCATGTTATCATTCAGAAAAGAAAAGGAAACACATGGGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCAGTCGGCATGTTATCATTCAGAAAAGAAAAGGAAACACATGGGCA  494

seq1  CTAGTTACAGCATAGCATATACAGAGGACATTGTCTCGTGTATTTTAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTACAGCATAGCATATACAGAGGACATTGTCTCGTGTATTTTAAAA  544

seq1  CTCTGAAAACATACTTTGAAGTTTATCATGATAAATGAGTGTTTGAATTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAAAACATACTTTGAAGTTTATCATGATAAATGAGTGTTTGAATTG  594

seq1  GTAGACATATTTAACTGAGCTTACGTACAAACAAGGAACACTGTCCCCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGACATATTTAACTGAGCTTACGTACAAACAAGGAACACTGTCCCCTA  644

seq1  ACTATTACATGTCCCATTTGGTATCTATTCCAGATATTAAGAAATAATTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTACATGTCCCATTTGGTATCTATTCCAGATATTAAGAAATAATTA  694

seq1  GTAAATGATGTCCATATATTATATATTATTAATACATTATATGTTGATGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATGATGTCCATATATTATATATTATTAATACATTATATGTTGATGT  744

seq1  TTTTATTTGATGCCAATCTTCAAAATCAATGCTTGAAGATCAACATCATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTGATGCCAATCTTCAAAATCAATGCTTGAAGATCAACATCATG  794

seq1  AATATGTCTTGCACTCTCATATCAAACTTTTGGGAATGTTCTATGATATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGTCTTGCACTCTCATATCAAACTTTTGGGAATGTTCTATGATATT  844

seq1  ATGTAAAAGTTACTTTTGTGTGTGATGCACTTCATTTCCTTTTTTTTGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAAAGTTACTTTTGTGTGTGATGCACTTCATTTCCTTTTTTTTGAA  894

seq1  ATTACATTTATTTTTAGGTTTTAAATATTTACTATTCCTTGATAATTCTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACATTTATTTTTAGGTTTTAAATATTTACTATTCCTTGATAATTCTG  944

seq1  GGATAACGAGGGGAATTGTACTCAGTACTTCTGAGAGTTGTGGCTCCTTG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAACGAGGGGAATTGTACTCAGTACTTCTGAGAGTTGTGGCTCCTTG  994

seq1  TTCTGTGCCTTAGTTAGAATTC  1022
      ||||||||||||||||||||||
seq2  TTCTGTGCCTTAGTTAGAATTC  1016