BAC Information

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BAC

Clone NameB6Ng01-055L12
Chromosome6 (Build37)
Map Location 132,130,780 - 132,165,380
singlet/doubletdoublet
Overlap genePrb1, LOC631126
Upstream geneEG434094, Klra2, LOC434095, 2010012C16Rik, Styk1, Csda, LOC625758, 5430401F13Rik, LOC625781, Tas2r130, Tas2r107, Tas2r106, Tas2r104, Tas2r105, Tas2r114, LOC639802, EG114600
Downstream geneLOC100043878, Prpmp5, EG667929, EG381818, Prh1, Prp2, A630073D07Rik, Tas2r120, Tas2r121, Tas2r122, Tas2r115, Tas2r124, Tas2r102, Tas2r136, Tas2r145-ps3, Tas2r117, Tas2r111-ps2, Tas2r123, Tas2r116, Tas2r110, Tas2r113, Tas2r142-ps5, Tas2r125, Tas2r146-ps1, Tas2r129, Tas2r131, Tas2r109, EG667992, LOC100043634, Tas2r140, LOC668002, Tas2r141-ps4, 2700089E24Rik, LOC630618
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-055L12.bB6Ng01-055L12.g
ACCDH878085DH878086
length1,0811,217
definitionDH878085|Mus musculus domesticus DNA, BAC clone: B6Ng01-055L12, 5' end.DH878086|Mus musculus domesticus DNA, BAC clone: B6Ng01-055L12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(132,164,283 - 132,165,380)(132,130,780 - 132,132,029)
sequence
gaattctatctacattttcacaaatgtcaggaacagactattgtcttcaa
atagctaagagaaaagtctcaagactcaagtgtcctacaatgacatactt
aattcaagaaggcctcacctcctaatagtatcacaacttgtaaaaagcat
attctaaataccatacactcctaagataaggttttcttcattgtatatat
aaatgcggcacacactgcatatatgtgagtttgcattgatggagactgga
agaggatgtcaggatttgttattttcatcttcttcccttatgacatgaaa
tctcacaaaacatagtgtgatgctgtcaaccagtaatctcacaactcatc
ctgcttctgctttatatattactgaggttataattacaaatgtgaccatc
catatttttgcatgggttctgggaatttgaacacagtttgtgaggcttac
aagcacactttaccactgagccatacgttcagtcacagtaggagcattcc
aacacaatccagtcagttgtctggaaattgttcaaggctaaattaacatt
ttctcatgtattaatttttgattttccaaacttaccagtaaagaaatctt
caaaccaaaatgtagagatttgctcagcataggatatattactgtttatc
cttatggaagttctgagaattacacctgatacaacgttgagtagaaaatg
aaattattggtggcaggtgttgggggaagacatgatatgatcttatgagg
caagaaagctccaaatttattgtcgagttctttaatgtttaatgtttatc
atatactccagggcatgcagtagttcattttctctgtgggattctcttgg
agagaaccaaatctttatttgcaagtagttcccagtagaagatatgttat
gagttaggaatgggaattttttcaccacttctgtttcagcactagggcat
tatctggtagagatctatccagtcagtgcatgctgtatagtctctgtgca
tcacatatatgatggttttttggttaaatacctgtccatcatgtctcatc
tctctgactcttcactttagacctcctttgc
gaattccattatctatttgattgtgtctgaagagattcattttgcttttt
aaaaataaataaggaaatctcagtctctaaacatggccataatccatggt
aatagggctaggctttctatatgagaacagaatatttgggaaaaatcaga
gctcgtaatactttatacagattttttcaccaattcccaaacatgtattc
aaataccaaaaaatatacttgatatttttatttcacgtctatgtggcaca
gtctactatatagtcaaattttctatatcttccaaatacatctcaaaagt
gacaaaacactctagctctcctagctctgagcagtccacactccttcctc
aaaacccactaatactccatgaatgctcacttaacatatttactataatt
cctactagccttcataacaaatgtttgggtggtaatctaaaatagtctcc
tttggcagaagtggtaatgtaggtacaagccaaggcaggtaaaagaagtt
gtggtctagcaaaaagtcaattatgaagttagcagtaattacccaaggac
ttgaaattatttatatgcttaagaattcaaggaaagaagtatttagcttg
gaataaatttctagtgaaaggtttctggtttccttctgctgaattgcaat
ttcagctttcatagacaagtatatttgtataataaaatggttgtttttca
ctttctgctgatacaatatgctgtgcttcatacagagataccactgtgga
tgaattgcctattactgattttgaaataaaaataaatggaaaaacagatt
atgttataaggcccctcttctgtggtagattgttcaatatactgaatagt
taagattttacttgtaggaacactctatgaccaaaccaactattattaaa
catatatatatatattttaaatagaaggttgtttatagctcaaaggttca
ttccattatcgccatgttgggtagcatggcaacatccagcaggatagctc
ttggacaggagttgaaattctaaatctgatcaaacagacgaagacaactc
ttccagtggcctatgaacatctcaagaacagctctaactgaaataacttc
ttataacaagatcctcatattcatcgagccacatttctataggtcctcat
gctagcatattaatccacattcgctcctggcttcatagctgttcaaacat
gaggctatggatggaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_132164283_132165380
seq2: B6Ng01-055L12.b_47_1127 (reverse)

seq1  GCAAAGGAGGTCTAAAAAGTGAAAGAGTCAGAGGAGATGGAGGACATGAA  50
      |||||||||||||  |||||| |||||||||| ||||||   |||||| |
seq2  GCAAAGGAGGTCT--AAAGTG-AAGAGTCAGA-GAGATG--AGACATG-A  43

seq1  TGGAACAGGTATTTTAAACACAAAAAGACCATCATATATGTGAATGCACA  100
      ||| ||||||||||  ||| |||||| ||||||||||||||| |||||||
seq2  TGG-ACAGGTATTT--AAC-CAAAAA-ACCATCATATATGTG-ATGCACA  87

seq1  GAGACTTATACAGCATGCACTGAACCTGGATAGATCTCTACCAGATAATG  150
      ||||| |||||||||||||||||  |||||||||||||||||||||||||
seq2  GAGAC-TATACAGCATGCACTGA--CTGGATAGATCTCTACCAGATAATG  134

seq1  CCCTAGTGCTGAAAACAGAAGTGGTGAAAAAATTCCCATTCCTAACTCAT  200
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CCCTAGTGCTG-AAACAGAAGTGGTGAAAAAATTCCCATTCCTAACTCAT  183

seq1  AACATATCTTCTACTGGGAACTACTTGCAAATAAAGATTTGGTTCTCTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATATCTTCTACTGGGAACTACTTGCAAATAAAGATTTGGTTCTCTCC  233

seq1  AAGAGAATCCCACAGAGAAAATGAACTACTGCATGCCCTGGAGTATATGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAATCCCACAGAGAAAATGAACTACTGCATGCCCTGGAGTATATGA  283

seq1  TAAACATTAAACATTAAAGAACTCGACAATAAATTTGGAGCTTTCTTGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACATTAAACATTAAAGAACTCGACAATAAATTTGGAGCTTTCTTGCC  333

seq1  TCATAAGATCATATCATGTCTTCCCCCAACACCTGCCACCAATAATTTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAGATCATATCATGTCTTCCCCCAACACCTGCCACCAATAATTTCA  383

seq1  TTTTCTACTCAACGTTGTATCAGGTGTAATTCTCAGAACTTCCATAAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTACTCAACGTTGTATCAGGTGTAATTCTCAGAACTTCCATAAGGA  433

seq1  TAAACAGTAATATATCCTATGCTGAGCAAATCTCTACATTTTGGTTTGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAGTAATATATCCTATGCTGAGCAAATCTCTACATTTTGGTTTGAA  483

seq1  GATTTCTTTACTGGTAAGTTTGGAAAATCAAAAATTAATACATGAGAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCTTTACTGGTAAGTTTGGAAAATCAAAAATTAATACATGAGAAAA  533

seq1  TGTTAATTTAGCCTTGAACAATTTCCAGACAACTGACTGGATTGTGTTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAATTTAGCCTTGAACAATTTCCAGACAACTGACTGGATTGTGTTGG  583

seq1  AATGCTCCTACTGTGACTGAACGTATGGCTCAGTGGTAAAGTGTGCTTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTCCTACTGTGACTGAACGTATGGCTCAGTGGTAAAGTGTGCTTGT  633

seq1  AAGCCTCACAAACTGTGTTCAAATTCCCAGAACCCATGCAAAAATATGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTCACAAACTGTGTTCAAATTCCCAGAACCCATGCAAAAATATGGA  683

seq1  TGGTCACATTTGTAATTATAACCTCAGTAATATATAAAGCAGAAGCAGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCACATTTGTAATTATAACCTCAGTAATATATAAAGCAGAAGCAGGA  733

seq1  TGAGTTGTGAGATTACTGGTTGACAGCATCACACTATGTTTTGTGAGATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTGTGAGATTACTGGTTGACAGCATCACACTATGTTTTGTGAGATT  783

seq1  TCATGTCATAAGGGAAGAAGATGAAAATAACAAATCCTGACATCCTCTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTCATAAGGGAAGAAGATGAAAATAACAAATCCTGACATCCTCTTC  833

seq1  CAGTCTCCATCAATGCAAACTCACATATATGCAGTGTGTGCCGCATTTAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTCCATCAATGCAAACTCACATATATGCAGTGTGTGCCGCATTTAT  883

seq1  ATATACAATGAAGAAAACCTTATCTTAGGAGTGTATGGTATTTAGAATAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACAATGAAGAAAACCTTATCTTAGGAGTGTATGGTATTTAGAATAT  933

seq1  GCTTTTTACAAGTTGTGATACTATTAGGAGGTGAGGCCTTCTTGAATTAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTTACAAGTTGTGATACTATTAGGAGGTGAGGCCTTCTTGAATTAA  983

seq1  GTATGTCATTGTAGGACACTTGAGTCTTGAGACTTTTCTCTTAGCTATTT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTCATTGTAGGACACTTGAGTCTTGAGACTTTTCTCTTAGCTATTT  1033

seq1  GAAGACAATAGTCTGTTCCTGACATTTGTGAAAATGTAGATAGAATTC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACAATAGTCTGTTCCTGACATTTGTGAAAATGTAGATAGAATTC  1081

seq1: chr6_132130780_132132029
seq2: B6Ng01-055L12.g_67_1283

seq1  GAATTCCATTATCTATTTGATTGTGTCTGAAGAGATTCATTTTGCTTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTATCTATTTGATTGTGTCTGAAGAGATTCATTTTGCTTTTT  50

seq1  AAAAATAAATAAGGAAATCTCAGTCTCTAAACATGGCCATAATCCATGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAAATAAGGAAATCTCAGTCTCTAAACATGGCCATAATCCATGGT  100

seq1  AATAGGGCTAGGCTTTCTATATGAGAACAGAATATTTGGGAAAAATCAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGGGCTAGGCTTTCTATATGAGAACAGAATATTTGGGAAAAATCAGA  150

seq1  GCTCGTAATACTTTATACAGATTTTTTCACCAATTCCCAAACATGTATTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCGTAATACTTTATACAGATTTTTTCACCAATTCCCAAACATGTATTC  200

seq1  AAATACCAAAAAATATACTTGATATTTTTATTTCACGTCTATGTGGCACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACCAAAAAATATACTTGATATTTTTATTTCACGTCTATGTGGCACA  250

seq1  GTCTACTATATAGTCAAATTTTCTATATCTTCCAAATACATCTCAAAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTACTATATAGTCAAATTTTCTATATCTTCCAAATACATCTCAAAAGT  300

seq1  GACAAAACACTCTAGCTCTCCTAGCTCTGAGCAGTCCACACTCCTTCCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAACACTCTAGCTCTCCTAGCTCTGAGCAGTCCACACTCCTTCCTC  350

seq1  AAAACCCACTAATACTCCATGAATGCTCACTTAACATATTTACTATAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCCACTAATACTCCATGAATGCTCACTTAACATATTTACTATAATT  400

seq1  CCTACTAGCCTTCATAACAAATGTTTGGGTGGTAATCTAAAATAGTCTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACTAGCCTTCATAACAAATGTTTGGGTGGTAATCTAAAATAGTCTCC  450

seq1  TTTGGCAGAAGTGGTAATGTAGGTACAAGCCAAGGCAGGTAAAAGAAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCAGAAGTGGTAATGTAGGTACAAGCCAAGGCAGGTAAAAGAAGTT  500

seq1  GTGGTCTAGCAAAAAGTCAATTATGAAGTTAGCAGTAATTACCCAAGGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTCTAGCAAAAAGTCAATTATGAAGTTAGCAGTAATTACCCAAGGAC  550

seq1  TTGAAATTATTTATATGCTTAAGAATTCAAGGAAAGAAGTATTTAGCTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAATTATTTATATGCTTAAGAATTCAAGGAAAGAAGTATTTAGCTTG  600

seq1  GAATAAATTTCTAGTGAAAGGTTTCTGGTTTCCTTCTGCTGAATTGCAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAAATTTCTAGTGAAAGGTTTCTGGTTTCCTTCTGCTGAATTGCAAT  650

seq1  TTCAGCTTTCATAGACAAGTATATTTGTATAATAAAATGGTTGTTTTTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCTTTCATAGACAAGTATATTTGTATAATAAAATGGTTGTTTTTCA  700

seq1  CTTTCTGCTGATACAATATGCTGTGCTTCATACAGAGATACCACTGTGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGCTGATACAATATGCTGTGCTTCATACAGAGATACCACTGTGGA  750

seq1  TGAATTGCCTATTACTGATTTTGAAATAAAAATAAATGGAAAAACAGATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTGCCTATTACTGATTTTGAAATAAAAATAAATGGAAAAACAGATT  800

seq1  ATGTTATAAGGCCCCTCTTCTGTGGTAGATTGTTCAATATACTGAATAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTATAAGGCCCCTCTTCTGTGGTAGATTGTTCAATATACTGAATAGT  850

seq1  TAAGATTTTACTTGTAGGAACACTCTATGACCAAACCAACTATTATTAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATTTTACTTGTAGGAACACTCTATGACCAAACCAACTATTATTAAA  900

seq1  CATATATATATATATTTTAAATAGAAGGTTGTTTATAGCTCAGAAGTTCA  950
      |||||||||||||||||||||||||||||||||||||||||| | |||||
seq2  CATATATATATATATTTTAAATAGAAGGTTGTTTATAGCTCAAAGGTTCA  950

seq1  TTCCATTATCGCCATGTTGGGTAGCATGGCAACATCCAGGCAGGAATAGC  1000
      |||||||||||||||||||||||||||||||||||||| ||||| |||||
seq2  TTCCATTATCGCCATGTTGGGTAGCATGGCAACATCCA-GCAGG-ATAGC  998

seq1  TC-TGGACAGGGAGTTGAAAATTCTAAATCTTGATCCAAAACAGACGGAA  1049
      || |||||| ||||||| |||||||||||| |||||  |||||||| |||
seq2  TCTTGGACA-GGAGTTG-AAATTCTAAATC-TGATC--AAACAGAC-GAA  1042

seq1  GACAAACTCTTCCAAGTGGCCTATTGAAACATCTCCAAGACCAGCTCTAA  1099
      ||| ||||||||| ||||||||||   ||||||| ||||| ||||||| |
seq2  GAC-AACTCTTCC-AGTGGCCTAT--GAACATCT-CAAGAACAGCTCT-A  1086

seq1  ACTGAAAT-ACTTCTTATAACAAGATCACTCATATTCCATCAAGGCCACA  1148
      |||||||| |||||||||||||||||| |||||||| |||| | ||||||
seq2  ACTGAAATAACTTCTTATAACAAGATC-CTCATATT-CATCGA-GCCACA  1133

seq1  TTTTCTAATAGTGTCACTCCATTGGCTAGCCATATTTAATCCACCACATT  1198
       ||||| |||| ||| || |||  ||||| |||| |||||   |||||||
seq2  -TTTCT-ATAG-GTC-CT-CAT--GCTAG-CATA-TTAAT---CCACATT  1171

seq1  CTGCTCCCTAGCTTCCATAGGCTTGTTCAAACACATGAGTCTATGGA-GG  1247
      | ||| ||| |||| |||||   |||||||  ||||||| ||||||| ||
seq2  C-GCT-CCTGGCTT-CATAG--CTGTTCAA--ACATGAGGCTATGGATGG  1214

seq1  ACA  1250
      |||
seq2  ACA  1217