BAC Information

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BAC

Clone NameB6Ng01-055L21
Chromosome6 (Build37)
Map Location 10,463,028 - 10,593,346
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC330264
Downstream geneLOC100040285, LOC667650, AA545190
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-055L21.bB6Ng01-055L21.g
ACCDH878103DH878104
length1,1721,085
definitionDH878103|Mus musculus domesticus DNA, BAC clone: B6Ng01-055L21, 5' end.DH878104|Mus musculus domesticus DNA, BAC clone: B6Ng01-055L21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(10,463,028 - 10,464,209)(10,592,253 - 10,593,346)
sequence
gaattcttatactggaaatgaccaaatctccatttactgtgaaagacccc
cgaagggagaccctcactcaagcactcaagccccgggacagccgaggacc
caagaagacactgagaccgtactcaaaatgtagaaggcaagatttaatag
aacaacagcaagaaagcacatgaaacatagaccagagctctggggtcgaa
actcatgcacctagtggtgtagaggagaatcgacaaccagccaaattttt
tacaggcttatatagtaaaactcaaggggggagagctgggcagggaaagt
acaagtttacatcactagggggttctgccaagggacaaggggttctgcca
agggaatctacgtaactaaggggtcatgtcctatcatttggcaatgtacc
cggttcattttgaggttgttccaggaggcccttatctcaaaaatgttctt
ggaacagtttttagttgggagggttcgaactctaggatgaggagttcagg
aatgcattctggggtgaagattctgggaacaatctctagatgggaggggt
cggattctggggtgaagaagagtttagtaaaaatttttattcttcaactg
tatttcttttctttctttccttttttttcccccaagcacactttatttta
tgtgacattccaaatctttcttctctgattctgttttgaatatatattcc
attcttgaattatttcatttttattagatattttatttatttgcatttca
aatgctatcccttctcctagtttcccctctgaaaatcccctacctccccc
tgcttcccaacccacccactactctcatcctggctctggcattcccctat
tctgggtcatagaaccttcacaataccaagggccttccctcccattgatg
accaactaggccatcctcactacatatgcagttagagccatgagtccctc
catgtgttttcttgattagcggtttagtcccagggagctcctgaggtact
ggttagtcatatgatgttcctctatggggtgaaacccttcagctctgggg
tactttctcctagcttcttcatgggatccttggctcccatccgatgatga
actttgagaatcacctctctggtagtcaggcactgcgagcctctcaagag
aacgcctatgtaggctcctgtc
gaattcattacagaatataaatattaacattctaagtaagagacatatct
gggtatttaaggattccttgaataaatatttggtattcttaatttagaat
tattacggaatgtagaagaaattcttaatatattaacacacataatatgt
tattttcttagaattctctataactaaaaatgttactacatttataactc
attatataaaatgttgacatatattttataacttgaaattaataaatatt
atcattgtgcttttgattgaaagaaatagacaatatttcttgtaatccag
attggctctatgctttctatatagcacaggaaaactctgattttacactt
tttaccttgtgatttctgagagtaatggaatacactgttatatctggttt
gctgtgttttgtttagatctagaattttgtaacacaaagcaatcagttat
ggtttctattgataggttaaaacaccatgaccaacaccaacatggagctg
aaaaggtttattttcagtatacagttccatattttagccccaaatcaaag
ggagtgagcatgagactcagactggagacctgatatcagaaattgaagca
caaatcatagaggaatgcttgttgcttgcttctcatggcttgctccagaa
atatcaccacccacaatgagctgtggtcttctacactaattaatgattaa
aatgtgcctataggcctatgtgcagagacattttctcatctgtggttcct
tctccaataattcatattagttcaatgtgagaaaataaaagaaaacaaaa
caaaacataaaaccaactagaataccaatcattctaccaacttagctact
atctaagtaggtctacttgtgaatatctgtcaaactgaagaagtagaaat
caataaccagctggacttggtggctcacacctttaatcccagcactcggg
aggcagtggcagcagatttctgagttcagaggccagcctgtgtacagcgt
gagttcagaaagcagggctatacagagaaatccttgtctgaaaaaacaag
agaagaaggagggaaggaaggagagaggaaggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_10463028_10464209
seq2: B6Ng01-055L21.b_48_1219

seq1  GAATTCTTATACTGGAAATGACCAAATCTCCATTTACTGTGAAAGACCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTATACTGGAAATGACCAAATCTCCATTTACTGTGAAAGACCCC  50

seq1  CGAAGGGAGACCCTCACTCAAGCACTCAAGCCCCGGGACAGCCGAGGACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAGGGAGACCCTCACTCAAGCACTCAAGCCCCGGGACAGCCGAGGACC  100

seq1  CAAGAAGACACTGAGACCGTACTCAAAATGTAGAAGGCAAGATTTAATAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAAGACACTGAGACCGTACTCAAAATGTAGAAGGCAAGATTTAATAG  150

seq1  AACAACAGCAAGAAAGCACATGAAACATAGACCAGAGCTCTGGGGTCGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACAGCAAGAAAGCACATGAAACATAGACCAGAGCTCTGGGGTCGAA  200

seq1  ACTCATGCACCTAGTGGTGTAGAGGAGAATCGACAACCAGCCAAATTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATGCACCTAGTGGTGTAGAGGAGAATCGACAACCAGCCAAATTTTT  250

seq1  TACAGGCTTATATAGTAAAACTCAAGGGGGGAGAGCTGGGCAGGGAAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGCTTATATAGTAAAACTCAAGGGGGGAGAGCTGGGCAGGGAAAGT  300

seq1  ACAAGTTTACATCACTAGGGGGTTCTGCCAAGGGACAAGGGGTTCTGCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTTTACATCACTAGGGGGTTCTGCCAAGGGACAAGGGGTTCTGCCA  350

seq1  AGGGAATCTACGTAACTAAGGGGTCATGTCCTATCATTTGGCAATGTACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAATCTACGTAACTAAGGGGTCATGTCCTATCATTTGGCAATGTACC  400

seq1  CGGTTCATTTTGAGGTTGTTCCAGGAGGCCCTTATCTCAAAAATGTTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTTCATTTTGAGGTTGTTCCAGGAGGCCCTTATCTCAAAAATGTTCTT  450

seq1  GGAACAGTTTTTAGTTGGGAGGGTTCGAACTCTAGGATGAGGAGTTCAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACAGTTTTTAGTTGGGAGGGTTCGAACTCTAGGATGAGGAGTTCAGG  500

seq1  AATGCATTCTGGGGTGAAGATTCTGGGAACAATCTCTAGATGGGAGGGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCATTCTGGGGTGAAGATTCTGGGAACAATCTCTAGATGGGAGGGGT  550

seq1  CGGATTCTGGGGTGAAGAAGAGTTTAGTAAAAATTTTTATTCTTCAACTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGATTCTGGGGTGAAGAAGAGTTTAGTAAAAATTTTTATTCTTCAACTG  600

seq1  TATTTCTTTTCTTTCTTTCCTTTTTTTTCCCCCAAGCACACTTTATTTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTTTTCTTTCTTTCCTTTTTTTTCCCCCAAGCACACTTTATTTTA  650

seq1  TGTGACATTCCAAATCTTTCTTCTCTGATTCTGTTTTGAATATATATTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACATTCCAAATCTTTCTTCTCTGATTCTGTTTTGAATATATATTCC  700

seq1  ATTCTTGAATTATTTCATTTTTATTAGATATTTTATTTATTTGCATTTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTGAATTATTTCATTTTTATTAGATATTTTATTTATTTGCATTTCA  750

seq1  AATGCTATCCCTTCTCCTAGTTTCCCCTCTGAAAATCCCCTACCTCCCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTATCCCTTCTCCTAGTTTCCCCTCTGAAAATCCCCTACCTCCCCC  800

seq1  TGCTTCCCAACCCACCCACTACTCTCATCCTGGCTCTGGCATTCCCCTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCCCAACCCACCCACTACTCTCATCCTGGCTCTGGCATTCCCCTAT  850

seq1  TCTGGGTCATAGAACCTTCACAATACCAAGGGCCTTCCCTCCCATTGATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGTCATAGAACCTTCACAATACCAAGGGCCTTCCCTCCCATTGATG  900

seq1  ACCAACTAGGCCATCCTCACTACATATGCAGTTAGAGCCATGAGTCCCTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACTAGGCCATCCTCACTACATATGCAGTTAGAGCCATGAGTCCCTC  950

seq1  CATGTGTTTTCTTTGATTAGCGGTTTAGTCCCAGGGAGCTCCTGAGGTAC  1000
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CATGTGTTTTC-TTGATTAGCGGTTTAGTCCCAGGGAGCTCCTGAGGTAC  999

seq1  TGGTTAGTTCATATTGATGTTCCTCCTATGGGGTTGAAACCCCTTCAGCT  1050
      ||||||| ||||| |||||||||| |||||||| ||||| ||||||||||
seq2  TGGTTAG-TCATA-TGATGTTCCT-CTATGGGG-TGAAA-CCCTTCAGCT  1044

seq1  CCTGGGGTACTTTCT-CTAGCTCCTTCATGGGGGACCCTGTGCT-CCATC  1098
       |||||||||||||| |||||| ||||||  |||| |||  ||| |||||
seq2  -CTGGGGTACTTTCTCCTAGCTTCTTCAT--GGGATCCTTGGCTCCCATC  1091

seq1  CGATGGATG-ACTTTGAGTATCCACTTCTGTGTTAGTCAGGCACTGGCAG  1147
      |||| |||| |||||||| || ||| ||| || |||||||||||||   |
seq2  CGAT-GATGAACTTTGAGAAT-CACCTCTCTGGTAGTCAGGCACTG--CG  1137

seq1  AGCCTCTCAGGAG-ACAGCTATGTTAGGCTCCTGTC  1182
      ||||||||| ||| ||  ||||| ||||||||||||
seq2  AGCCTCTCAAGAGAACGCCTATG-TAGGCTCCTGTC  1172

seq1: chr6_10592253_10593346
seq2: B6Ng01-055L21.g_65_1149 (reverse)

seq1  CTTCCTTCCT---TCCTTCCTTCCCTCCTTCTTTCCTTCCTTTGTTTTTT  47
      | ||||||||   ||||||||||||||||||||      || |  |||||
seq2  CCTCCTTCCTCTCTCCTTCCTTCCCTCCTTCTT------CTCTTGTTTTT  44

seq1  TCAGAC-AGGGTTTCTCTGTATAGCCCTGGCTTTCCTGGAACTCACGCTG  96
      |||||| ||| ||||||||||||||||| ||||||   ||||||||||||
seq2  TCAGACAAGGATTTCTCTGTATAGCCCT-GCTTTC--TGAACTCACGCTG  91

seq1  TACACCAGGCTGGCCTCTGAACTCAGAAATCTGCCTGCCACTGCCTCCCG  146
      |||| |||||||||||||||||||||||||||| ||||||||||||||||
seq2  TACA-CAGGCTGGCCTCTGAACTCAGAAATCTG-CTGCCACTGCCTCCCG  139

seq1  AGTGCTGGGATTAAAGGTGTGAGCCACCAAGTCCAGCTGGTTATTGATTT  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTGGGATTAAAGGTGTGAGCCACCAAGTCCAGCTGGTTATTGATTT  189

seq1  CTACTTCCTTCAGTTTTGACAGATATTCACAAGTAGACCTACTTAGATAG  246
      |||||| |||||| ||||||||||||||||||||||||||||||||||||
seq2  CTACTT-CTTCAG-TTTGACAGATATTCACAAGTAGACCTACTTAGATAG  237

seq1  TAGCTAAGTTGGTAGAATGATTGGTATTCTAGTTGGTTTTATGTTTTGTT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTAAGTTGGTAGAATGATTGGTATTCTAGTTGGTTTTATGTTTTGTT  287

seq1  TTGTTTTCTTTTATTTTCTCACATTGAACTAATATGAATTATTGGAGAAG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTCTTTTATTTTCTCACATTGAACTAATATGAATTATTGGAGAAG  337

seq1  GAACCACAGATGAGAAAATGTCTCTGCACATAGGCCTATAGGCACATTTT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCACAGATGAGAAAATGTCTCTGCACATAGGCCTATAGGCACATTTT  387

seq1  AATCATTAATTAGTGTAGAAGACCACAGCTCATTGTGGGTGGTGATATTT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATTAATTAGTGTAGAAGACCACAGCTCATTGTGGGTGGTGATATTT  437

seq1  CTGGAGCAAGCCATGAGAAGCAAGCAACAAGCATTCCTCTATGATTTGTG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGCAAGCCATGAGAAGCAAGCAACAAGCATTCCTCTATGATTTGTG  487

seq1  CTTCAATTTCTGATATCAGGTCTCCAGTCTGAGTCTCATGCTCACTCCCT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAATTTCTGATATCAGGTCTCCAGTCTGAGTCTCATGCTCACTCCCT  537

seq1  TTGATTTGGGGCTAAAATATGGAACTGTATACTGAAAATAAACCTTTTCA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTGGGGCTAAAATATGGAACTGTATACTGAAAATAAACCTTTTCA  587

seq1  GCTCCATGTTGGTGTTGGTCATGGTGTTTTAACCTATCAATAGAAACCAT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCATGTTGGTGTTGGTCATGGTGTTTTAACCTATCAATAGAAACCAT  637

seq1  AACTGATTGCTTTGTGTTACAAAATTCTAGATCTAAACAAAACACAGCAA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGATTGCTTTGTGTTACAAAATTCTAGATCTAAACAAAACACAGCAA  687

seq1  ACCAGATATAACAGTGTATTCCATTACTCTCAGAAATCACAAGGTAAAAA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGATATAACAGTGTATTCCATTACTCTCAGAAATCACAAGGTAAAAA  737

seq1  GTGTAAAATCAGAGTTTTCCTGTGCTATATAGAAAGCATAGAGCCAATCT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAAAATCAGAGTTTTCCTGTGCTATATAGAAAGCATAGAGCCAATCT  787

seq1  GGATTACAAGAAATATTGTCTATTTCTTTCAATCAAAAGCACAATGATAA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTACAAGAAATATTGTCTATTTCTTTCAATCAAAAGCACAATGATAA  837

seq1  TATTTATTAATTTCAAGTTATAAAATATATGTCAACATTTTATATAATGA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATTAATTTCAAGTTATAAAATATATGTCAACATTTTATATAATGA  887

seq1  GTTATAAATGTAGTAACATTTTTAGTTATAGAGAATTCTAAGAAAATAAC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATAAATGTAGTAACATTTTTAGTTATAGAGAATTCTAAGAAAATAAC  937

seq1  ATATTATGTGTGTTAATATATTAAGAATTTCTTCTACATTCCGTAATAAT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTATGTGTGTTAATATATTAAGAATTTCTTCTACATTCCGTAATAAT  987

seq1  TCTAAATTAAGAATACCAAATATTTATTCAAGGAATCCTTAAATACCCAG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAATTAAGAATACCAAATATTTATTCAAGGAATCCTTAAATACCCAG  1037

seq1  ATATGTCTCTTACTTAGAATGTTAATATTTATATTCTGTAATGAATTC  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTCTCTTACTTAGAATGTTAATATTTATATTCTGTAATGAATTC  1085