MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-058L11
Chromosome	6 (Build37)
Map Location	15,168,877 - 15,169,776
singlet/doublet	singlet
Overlap gene	Foxp2
Upstream gene	LOC100040513, LOC667797, Ppp1r3a, LOC100040568
Downstream gene	Mdfic
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100040513 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040513
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC667797 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667797
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Ppp1r3a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:140491 MGI:2153588
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Foxp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:114142 MGI:2148705
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC100040568 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040568
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Mdfic (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16543 MGI:104611
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ppp1r3a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144922614 GeneID:140491 MGI:2153588
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein phosphatase 1, regulatory (inhibitor) subunit 3A transcript_id : NM_080464.2

name	Foxp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:92087053 GeneID:114142 MGI:2148705
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : forkhead box P2 transcript_id : NM_053242.4

name	Foxp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46877059 GeneID:114142 MGI:2148705
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : forkhead box P2 transcript_id : NM_212435.1

name	Mdfic (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:88014734 GeneID:16543 MGI:104611
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MyoD family inhibitor domain containing transcript_id : NM_175088.3

name	Ppp1r3a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:144922615 CCDS:CCDS19917.1 GeneID:140491 MGI:2153588
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0000163 - protein phosphatase type 1 activity [Evidence ISS] GO_process : GO:0005975 - carbohydrate metabolism [Evidence IEA]; GO:0005977 - glycogen metabolism [Evidence TAS] codon_start : 1 product : protein phosphatase 1, regulatory (inhibitor) subunit 3A protein_id : NP_536712.2

name	Foxp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30348979 CCDS:CCDS19918.1 GeneID:114142 MGI:2148705
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0046982 - protein heterodimerization activity [Evidence IPI]; GO:0042803 - protein homodimerization activity [Evidence IPI]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0016564 - transcriptional repressor activity [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0016481 - negative regulation of transcription [Evidence IDA]; GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : forkhead box P2 protein_id : NP_444472.2

name	Foxp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46877060 CCDS:CCDS19918.1 GeneID:114142 MGI:2148705
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0046982 - protein heterodimerization activity [Evidence IPI]; GO:0042803 - protein homodimerization activity [Evidence IPI]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0016564 - transcriptional repressor activity [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0016481 - negative regulation of transcription [Evidence IDA]; GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : forkhead box P2 protein_id : NP_997600.1

name	Mdfic (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28201976 CCDS:CCDS19919.1 GeneID:16543 MGI:104611
definition	codon_start : 1 note : clone 1.5; kidney cell line derived transcript 1 product : MyoD family inhibitor domain containing protein_id : NP_780297.1

name	LOC100040513 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040513
definition	number : 1 pseudo : _no_value

name	LOC667797 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667797
definition	number : 1 pseudo : _no_value

name	LOC100040568 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040568
definition	number : 1 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:224274
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:460403
definition	standard_name : stSG633046

name	(CDS detail)
type	STS
link
xref	UniSTS:178274
definition	standard_name : G67065

name	(CDS detail)
type	STS
link
xref	UniSTS:130814
definition	standard_name : D6Mit265

name	(CDS detail)
type	STS
link
xref	UniSTS:426653
definition	standard_name : REN101856

name	(CDS detail)
type	STS
link
xref	UniSTS:426657
definition	standard_name : REN101860

name	(CDS detail)
type	STS
link
xref	UniSTS:116585
definition	standard_name : D6Mit1

name	(CDS detail)
type	STS
link
xref	UniSTS:426991
definition	standard_name : REN102194

name	(CDS detail)
type	STS
link
xref	UniSTS:427000
definition	standard_name : REN102203

name	(CDS detail)
type	STS
link
xref	UniSTS:284692
definition	standard_name : ECD03612

name	(CDS detail)
type	STS
link
xref	UniSTS:427001
definition	standard_name : REN102204

name	(CDS detail)
type	STS
link
xref	UniSTS:427004
definition	standard_name : REN102207

name	(CDS detail)
type	STS
link
xref	UniSTS:427011
definition	standard_name : REN102214

name	(CDS detail)
type	STS
link
xref	UniSTS:285684
definition	standard_name : ECD04612

name	(CDS detail)
type	STS
link
xref	UniSTS:427012
definition	standard_name : REN102215

name	(CDS detail)
type	STS
link
xref	UniSTS:427015
definition	standard_name : REN102218

name	(CDS detail)
type	STS
link
xref	UniSTS:427050
definition	standard_name : REN102253

name	(CDS detail)
type	STS
link
xref	UniSTS:427051
definition	standard_name : REN102254

name	(CDS detail)
type	STS
link
xref	UniSTS:427052
definition	standard_name : REN102255

name	(CDS detail)
type	STS
link
xref	UniSTS:427074
definition	standard_name : REN102277

name	(CDS detail)
type	STS
link
xref	UniSTS:427075
definition	standard_name : REN102278

name	(CDS detail)
type	STS
link
xref	UniSTS:449732
definition	standard_name : stSG611314

name	(CDS detail)
type	STS
link
xref	UniSTS:167496
definition	standard_name : D6Ertd588e

name	(CDS detail)
type	STS
link
xref	UniSTS:427382
definition	standard_name : REN102585

name	(CDS detail)
type	STS
link
xref	UniSTS:130856
definition	standard_name : MTH1225

name	(CDS detail)
type	STS
link
xref	UniSTS:130857
definition	standard_name : D6Mit305.2

name	(CDS detail)
type	STS
link
xref	UniSTS:427672
definition	standard_name : REN102875

name	(CDS detail)
type	STS
link
xref	UniSTS:287753
definition	standard_name : ECD06693

name	(CDS detail)
type	STS
link
xref	UniSTS:427952
definition	standard_name : REN103155

name	(CDS detail)
type	STS
link
xref	UniSTS:427953
definition	standard_name : REN103156

name	(CDS detail)
type	STS
link
xref	UniSTS:449876
definition	standard_name : stSG611484

name	(CDS detail)
type	STS
link
xref	UniSTS:428035
definition	standard_name : REN103238

name	(CDS detail)
type	STS
link
xref	UniSTS:428037
definition	standard_name : REN103240

name	(CDS detail)
type	STS
link
xref	UniSTS:428053
definition	standard_name : REN103256

name	(CDS detail)
type	STS
link
xref	UniSTS:428062
definition	standard_name : REN103265

name	(CDS detail)
type	STS
link
xref	UniSTS:281316
definition	standard_name : ECD00202

name	(CDS detail)
type	STS
link
xref	UniSTS:428082
definition	standard_name : REN103285

name	(CDS detail)
type	STS
link
xref	UniSTS:282404
definition	standard_name : ECD01298

name	(CDS detail)
type	STS
link
xref	UniSTS:449886
definition	standard_name : stSG611494

name	(CDS detail)
type	STS
link
xref	UniSTS:428083
definition	standard_name : REN103286

name	(CDS detail)
type	STS
link
xref	UniSTS:428084
definition	standard_name : REN103287

name	(CDS detail)
type	STS
link
xref	UniSTS:281472
definition	standard_name : ECD00361

name	(CDS detail)
type	STS
link
xref	UniSTS:428204
definition	standard_name : REN103407

name	(CDS detail)
type	STS
link
xref	UniSTS:449909
definition	standard_name : stSG611518

name	(CDS detail)
type	STS
link
xref	UniSTS:428205
definition	standard_name : REN103408

name	(CDS detail)
type	STS
link
xref	UniSTS:449910
definition	standard_name : stSG611519

name	(CDS detail)
type	STS
link
xref	UniSTS:428210
definition	standard_name : REN103413

name	(CDS detail)
type	STS
link
xref	UniSTS:428211
definition	standard_name : REN103414

name	(CDS detail)
type	STS
link
xref	UniSTS:449911
definition	standard_name : stSG611520

name	(CDS detail)
type	STS
link
xref	UniSTS:283950
definition	standard_name : ECD02857

name	(CDS detail)
type	STS
link
xref	UniSTS:449912
definition	standard_name : stSG611521

name	(CDS detail)
type	STS
link
xref	UniSTS:428219
definition	standard_name : REN103422

name	(CDS detail)
type	STS
link
xref	UniSTS:428220
definition	standard_name : REN103423

name	(CDS detail)
type	STS
link
xref	UniSTS:428221
definition	standard_name : REN103424

name	(CDS detail)
type	STS
link
xref	UniSTS:428222
definition	standard_name : REN103425

name	(CDS detail)
type	STS
link
xref	UniSTS:185656
definition	standard_name : AI449000

name	(CDS detail)
type	STS
link
xref	UniSTS:283626
definition	standard_name : ECD02531

name	(CDS detail)
type	STS
link
xref	UniSTS:428224
definition	standard_name : REN103427

name	(CDS detail)
type	STS
link
xref	UniSTS:428225
definition	standard_name : REN103428

name	(CDS detail)
type	STS
link
xref	UniSTS:428226
definition	standard_name : REN103429

name	(CDS detail)
type	STS
link
xref	UniSTS:285302
definition	standard_name : ECD04224

name	(CDS detail)
type	STS
link
xref	UniSTS:267613
definition	standard_name : MARC_13931-13932:1025532946:1

name	(CDS detail)
type	STS
link
xref	UniSTS:428228
definition	standard_name : REN103431

name	(CDS detail)
type	STS
link
xref	UniSTS:428229
definition	standard_name : REN103432

name	(CDS detail)
type	STS
link
xref	UniSTS:428230
definition	standard_name : REN103433

name	(CDS detail)
type	STS
link
xref	UniSTS:245239
definition	standard_name : BE110309

name	(CDS detail)
type	STS
link
xref	UniSTS:130712
definition	standard_name : D6Mit168

name	(CDS detail)
type	STS
link
xref	UniSTS:428311
definition	standard_name : REN103514

name	(CDS detail)
type	STS
link
xref	UniSTS:287148
definition	standard_name : ECD06086

name	(CDS detail)
type	STS
link
xref	UniSTS:428444
definition	standard_name : REN103647

name	(CDS detail)
type	STS
link
xref	UniSTS:428446
definition	standard_name : REN103649

name	(CDS detail)
type	STS
link
xref	UniSTS:428508
definition	standard_name : REN103711

name	(CDS detail)
type	STS
link
xref	UniSTS:428808
definition	standard_name : REN104011

name	(CDS detail)
type	STS
link
xref	UniSTS:235389
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:296835
definition	standard_name : ECD15820

name	(CDS detail)
type	STS
link
xref	UniSTS:430240
definition	standard_name : REN105443

name	(CDS detail)
type	STS
link
xref	UniSTS:430243
definition	standard_name : REN105446

name	(CDS detail)
type	STS
link
xref	UniSTS:296541
definition	standard_name : ECD15524

name	(CDS detail)
type	STS
link
xref	UniSTS:224183
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:130769
definition	standard_name : D6Mit221.1

name	(CDS detail)
type	STS
link
xref	UniSTS:130768
definition	standard_name : MT3482

clone name	MSMg01-337G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-523P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-094O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-090O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-403M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-192C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338D12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-199J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432L02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-154I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-214O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-069C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-402B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-120I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-089M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-182C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-293L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-413O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-100L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-100K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-293M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-045P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-068F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-113J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-291A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-326E08
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-424B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-202G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-370I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-096A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-164K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-470H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-152M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-072B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-142E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260I02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384F09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-534E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341C14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222I13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088H03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046A14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014O15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201N13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212G09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-164G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126F15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001I07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189G01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002A14
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-058L11.b
ACC	DH880218
length	899
definition	DH880218\|Mus musculus domesticus DNA, BAC clone: B6Ng01-058L11, 5' end.
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattcttaatgagtgaagcacatcatgatgtgagattatcataaagttc tgggaaagatcttagcacctactttgttaaatgctaaaacagatttcatt gtatagttccactgattatactgtcacaatctggtgttaccaaagctttt tgtccagatatacaaagtattcaaaaatctttccaaacagtcttttgtac tgctatatttcttttatgttaaatgaaaatctgactttgataaatgactt atcttttcaactttctctgtgtgaagcagcctcacacattgttggttctc attttatgattctttcactcattcattcattcattcattcactcattcat tttaaagcctcttgccaggttgtcttagctggccgggcctgagcttttgg gctcaagctatcttcctgccatggcctttgatgtaaataaaaactaaagg ttggaatatgttgataatataaaaattacattatctagaaaattgtatac tttaagtatttagatacaaatgattcagattaagacttgttagggtgttt tgttttgttttgttttgtttgtttttattgtttttgttgtttttggttgg ggcttcatagacacagccattacatgtaaattttcaaagccatatcttca tatgtatgtagagcagatagtttctgactcttttcaatcatgagccattg tggtgtttatcatattcccaaatcttggaaatcctttacagatgagagga cagaaaatgggaggagtcagagaaacaggaattttgctatgagtttgtgt cctagaaatgccagagaactacacctatgaaatctttacaacttgactgc ttaacatgatctgaacaggctgacaccaatgataatgtgggggagggaa
quality values	Open. Hide. 47 47 31 38 61 61 61 61 61 61 47 47 61 61 49 49 61 61 49 61 61 61 61 61 59 61 49 59 43 30 37 41 37 36 30 44 59 61 61 61 59 61 61 61 61 59 59 61 61 61 61 61 59 55 55 59 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 59 61 61 61 61 59 59 59 59 59 55 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 59 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 59 61 61 61 61 61 61 61 61 61 59 59 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 59 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 55 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 55 61 61 61 50 61 55 61 55 61 55 61 61 61 61 61 55 55 61 55 61 61 45 61 50 61 61 61 61 47 61 61 61 61 50 61 61 55 61 49 61 61 61 61 43 61 61 61 43 61 61 61 53 61 47 61 61 29 61 61 61 61 61 35 61 61 19 61 61 61 61 61 61 35 61 61 47 53 61 42 47 43 39 35 36 47 28 53 39 39 52 35 50 61 61 50 61 53 45 50 45 50 53 39 39 53 47 50 53 53 39 45 35 47 24 33 21 19 26 42 61 39 46 61 31 53 38 50 45 50 45 40 36 52 61 28 53 24 53 31 27 27 9 47 28 52 21 13 61 31 43 53 53 52 39 53 47 31 47 30 43 36 34 35 52 35 30 38 53 53 31 50 36 29 45 45 52 37 57 29 21 34 12 19 17 40 39 50 47 38 30 38 32 32 32 37 26 34 53 30 34 19 18 13 23 38 53 50 39 43 52 14 32 10 22 42 21 12 30 8 15 21 10 53 6 43 34 23 16 30 50 38 47 45 23 27 23 10 33 13 43 53 23 25 23 10 24 57 39 52 28 29 37 17 38 29 22 28 20 36 42 22 20 24 28 24 33 19 36 30 50 34 18 33 28 40 37 41 36 18 32 30 25 16 10 18 23 25 33 22 8 52 10 27 8 16 28 21 37 18 27 34 22 15 31 16 34 30 11 18 21 9 37 28 20 34 8 16 21 12 14 15 28 19 32 38 20 38 21 30 15 15 8 22 36 31 27 33 31 27 35 24 11 22 11 28 20 48 26 11 7 5 18 15 11 30 16 14 14 13 13 33 40 52 23 24 39 35 38 7 15 37 20 27 32 15

Alignment Information

BAC End 1

BAC End 2

seq1: chr6_15168877_15169776
seq2: B6Ng01-058L11.b_48_946

seq1  GAATTCTTAATGAGTGAAGCACATCATGATGTGAGATTATCATAAAGTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAATGAGTGAAGCACATCATGATGTGAGATTATCATAAAGTTC  50

seq1  TGGGAAAGATCTTAGCACCTACTTTGTTAAATGCTAAAACAGATTTCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAAGATCTTAGCACCTACTTTGTTAAATGCTAAAACAGATTTCATT  100

seq1  GTATAGTTCCACTGATTATACTGTCACAATCTGGTGTTACCAAAGCTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAGTTCCACTGATTATACTGTCACAATCTGGTGTTACCAAAGCTTTT  150

seq1  TGTCCAGATATACAAAGTATTCAAAAATCTTTCCAAACAGTCTTTTGTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCAGATATACAAAGTATTCAAAAATCTTTCCAAACAGTCTTTTGTAC  200

seq1  TGCTATATTTCTTTTATGTTAAATGAAAATCTGACTTTGATAAATGACTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATATTTCTTTTATGTTAAATGAAAATCTGACTTTGATAAATGACTT  250

seq1  ATCTTTTCAACTTTCTCTGTGTGAAGCAGCCTCACACATTGTTGGTTCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTTCAACTTTCTCTGTGTGAAGCAGCCTCACACATTGTTGGTTCTC  300

seq1  ATTTTATGATTCTTTCACTCATTCATTCATTCATTCATTCACTCATTCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATGATTCTTTCACTCATTCATTCATTCATTCATTCACTCATTCAT  350

seq1  TTTAAAGCCTCTTGCCAGGTTGTCTTAGCTGGCCGGGCCTGAGCTTTTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAGCCTCTTGCCAGGTTGTCTTAGCTGGCCGGGCCTGAGCTTTTGG  400

seq1  GCTCAAGCTATCTTCCTGCCATGGCCTTTGATGTAAATAAAAACTAAAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAAGCTATCTTCCTGCCATGGCCTTTGATGTAAATAAAAACTAAAGG  450

seq1  TTGGAATATGTTGATAATATAAAAATTACATTATCTAGAAAATTGTATAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAATATGTTGATAATATAAAAATTACATTATCTAGAAAATTGTATAC  500

seq1  TTTAAGTATTTAGATACAAATGATTCAGATTAAGACTTGTTAGGGTGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGTATTTAGATACAAATGATTCAGATTAAGACTTGTTAGGGTGTTT  550

seq1  TGTTTTGTTTTGTTTTGTTTGTTTTTATTGTTTTTGTTGTTTTTGGTTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGTTTTGTTTTGTTTGTTTTTATTGTTTTTGTTGTTTTTGGTTGG  600

seq1  GGCTTCATAGACACAGCCATTACATGTAAATTTTCAAAGCCATATCTTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTCATAGACACAGCCATTACATGTAAATTTTCAAAGCCATATCTTCA  650

seq1  TATGTATGTAGAGCAGATAG-TTCTGACTCTTTTCAATCATGAGCCATTG  699
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TATGTATGTAGAGCAGATAGTTTCTGACTCTTTTCAATCATGAGCCATTG  700

seq1  TGGTGTTTATCATATTCCCAAATCTTGGAAATCC-TTACAGATGAGAGGA  748
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TGGTGTTTATCATATTCCCAAATCTTGGAAATCCTTTACAGATGAGAGGA  750

seq1  CAGAAAATGGGAGGAGTCAGAGAAACAGGAATTTTGCTATGAGTTTGTGT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAATGGGAGGAGTCAGAGAAACAGGAATTTTGCTATGAGTTTGTGT  800

seq1  CCTAGAAATGCCAGAGAAGCTACACCTATGAAATCTTACCAACATGACTG  848
      |||||||||||||||||| ||||||||||||||||||  |||| ||||||
seq2  CCTAGAAATGCCAGAGAA-CTACACCTATGAAATCTTTACAACTTGACTG  849

seq1  CTTAAGCATGATCTGAACAAGGCTGACACCAATGATAATGTGGGGGAGGG  898
      ||||| |||||||||||| |||||||||||||||||||||||||||||||
seq2  CTTAA-CATGATCTGAAC-AGGCTGACACCAATGATAATGTGGGGGAGGG  897

seq1  GA  900
       |
seq2  AA  899

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information