BAC Information

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BAC

Clone NameB6Ng01-062D24
Chromosome6 (Build37)1 (Build37)
Map Location 18,835,442 - 18,835,968141,405,724 - 141,406,653
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-062D24.bB6Ng01-062D24.g
ACCDH882706DH882707
length942935
definitionDH882706|Mus musculus domesticus DNA, BAC clone: B6Ng01-062D24, 5' end.DH882707|Mus musculus domesticus DNA, BAC clone: B6Ng01-062D24, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,442 - 18,835,968)(141,405,724 - 141,406,653)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagctctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacagtgtcttttgcgttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttccccagtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggattgattcgc
attattctacacgataacaaccagttgtgccagcaccaaatgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgctgtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccgcaagaggttcttt
tatccttgagaagaggttttgctatcctcggttttttgttattccagatg
aatttgcaaattgctccttctaattctttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggaaactttccatcttc
tgagatcttctttaatttctttcttcagagacttgaagtttttatcatac
agatctttcacttccttagttagagtcacgccgagatatttt
gaattcccacttccatattcatagacatgacagataatatttgaactgag
tctgaaaaataaatggaaatctggggatttgtggggggatgagaggcaga
aggtgtaataactattatttttgctgtaatacaggagacaatgctatttt
tgacaggcaggccaatgacatggaagtaaaagagaaaagcagaattgaaa
tagatggcagcaggaaggaaagatgtttggacaggacctggatgacagtg
tctgtacctatcagaactctgtaagcagtgagtgatggctttgaaggttt
accaactttctagttgagccaaatagacttgtaataacagcatgggagga
ggggtcactagcaagctatcagtagcatgacaacttactgactgttctga
acaccctccaagttagcatggagacatgcctgtaattttataattaatag
ttcttgtgtgtagcagtatgttgaacaatatacttccctactccagatat
cctcatcctaatcctagagatagcataataaacttacttatgtggcaaaa
taattacataggtgactaaagatctggaggagtggctcttatctgaagtt
atttatttggaccctaatataataaatgtcatcgtaaaggggattggagg
ggtagttgaccctagaaaagtaagttggagctgtaatattggaagagaac
agttttagcttctttatctatactatgtaaggaattctaggctaaagaag
aaggcaactgtaaactactcaaaatggcccaagattaatcgctttactgg
ttctatacatcaaggggtgcagcatggctccagtttggctgttgtcagtg
ccagcttgaatgtttggcctggccggtaatatttcacatacattgtgggt
gttggcagtttttatgtgcttctgcaggctgctga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835442_18835968
seq2: B6Ng01-062D24.b_45_572 (reverse)

seq1  CCAGAGATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50

seq1  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  100
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACATTTGGTGCTGGC  100

seq1  ACAACTGGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCT  150
      |||||||||||||||| ||||||| |||| ||||| ||||||||||||||
seq2  ACAACTGGTTGTTATCGTGTAGAATAATGCGAATCAATCCATACTTATCT  150

seq1  CCATGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  200
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  200

seq1  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250

seq1  TGGGCAGAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTG  299
      ||||||  |||||||| ||||||||||||||||||||||| |||||||| 
seq2  TGGGCACTGGGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTA  300

seq1  AGGTAGAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  349
      || | |||||| ||||||||||||||||||||||||||||||||||||||
seq2  AGATCGAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  350

seq1  GGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAA  399
       ||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CGCAAAAGACACTGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAA  400

seq1  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  450

seq1  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAA  499
      ||||| ||||||||||||||||||||||||||||||||||||||||| ||
seq2  AAAGAGCTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAAAAA  500

seq1  ATGGGGCTCAGAACTGAACAAAGAATTC  527
      ||||||||||||||||||||||||||||
seq2  ATGGGGCTCAGAACTGAACAAAGAATTC  528

seq1: chr1_141405724_141406653
seq2: B6Ng01-062D24.g_66_1000

seq1  GAATTCCCACTTCCATATTCATAGACATGACAGATAATATTTGAACTGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCACTTCCATATTCATAGACATGACAGATAATATTTGAACTGAG  50

seq1  TCTGAAAAATAAATGGAAATCTGGGGATTTGTGGGGGGATGAGAGGCAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAAAATAAATGGAAATCTGGGGATTTGTGGGGGGATGAGAGGCAGA  100

seq1  AGGTGTAATAACTATTATTTTTGCTGTAATACAGGAGACAATGCTATTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTAATAACTATTATTTTTGCTGTAATACAGGAGACAATGCTATTTT  150

seq1  TGACAGGCAGGCCAATGACATGGAAGTAAAAGAGAAAAGCAGAATTGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGGCAGGCCAATGACATGGAAGTAAAAGAGAAAAGCAGAATTGAAA  200

seq1  TAGATGGCAGCAGGAAGGAAAGATGTTTGGACAGGACCTGGATGACAGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGGCAGCAGGAAGGAAAGATGTTTGGACAGGACCTGGATGACAGTG  250

seq1  TCTGTACCTATCAGAACTCTGTAAGCAGTGAGTGATGGCTTTGAAGGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTACCTATCAGAACTCTGTAAGCAGTGAGTGATGGCTTTGAAGGTTT  300

seq1  ACCAACTTTCTAGTTGAGCCAAATAGACTTGTAATAACAGCATGGGAGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACTTTCTAGTTGAGCCAAATAGACTTGTAATAACAGCATGGGAGGA  350

seq1  GGGGTCACTAGCAAGCTATCAGTAGCATGACAACTTACTGACTGTTCTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTCACTAGCAAGCTATCAGTAGCATGACAACTTACTGACTGTTCTGA  400

seq1  ACACCCTCCAAGTTAGCATGGAGACATGCCTGTAATTTTATAATTAATAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCCTCCAAGTTAGCATGGAGACATGCCTGTAATTTTATAATTAATAG  450

seq1  TTCTTGTGTGTAGCAGTATGTTGAACAATATACTTCCCTACTCCAGATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGTGTGTAGCAGTATGTTGAACAATATACTTCCCTACTCCAGATAT  500

seq1  CCTCATCCTAATCCTAGAGATAGCATAATAAACTTACTTATGTGGCAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATCCTAATCCTAGAGATAGCATAATAAACTTACTTATGTGGCAAAA  550

seq1  TAATTACATAGGTGACTAAAGATCTGGAGGAGTGGCTCTTATCTGAAGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTACATAGGTGACTAAAGATCTGGAGGAGTGGCTCTTATCTGAAGTT  600

seq1  ATTTATTTGGACCCTAATATAATAAATGTCATCGTAAAGGGGATTGGAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTTGGACCCTAATATAATAAATGTCATCGTAAAGGGGATTGGAGG  650

seq1  GGTAGTTGACCCCAGAAAAGTAAGTTGGAGCTGTAATATTGGAAGAGAAC  700
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GGTAGTTGACCCTAGAAAAGTAAGTTGGAGCTGTAATATTGGAAGAGAAC  700

seq1  AGTTTTAGCTTCTTTATCTATACTATGTAAGGAA-TCTAGGCTAAAGAAG  749
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AGTTTTAGCTTCTTTATCTATACTATGTAAGGAATTCTAGGCTAAAGAAG  750

seq1  AAGGCAACTGTAAACTACTCAAAATGGCCCAAGATT-ATCGCTTTACTGG  798
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AAGGCAACTGTAAACTACTCAAAATGGCCCAAGATTAATCGCTTTACTGG  800

seq1  TTCTATACATCAA-GGGTGCAGCATGGCTCCAGTTTGGCTGTTGTCAGTG  847
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TTCTATACATCAAGGGGTGCAGCATGGCTCCAGTTTGGCTGTTGTCAGTG  850

seq1  CCAGCTTGAATGTTTGGCCTGG-CGGTAATATTTCACATACATTGTGGGT  896
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CCAGCTTGAATGTTTGGCCTGGCCGGTAATATTTCACATACATTGTGGGT  900

seq1  GTTGGCAGTTTTTATGTGC-TCTGCAGGCTGCTGA  930
      ||||||||||||||||||| |||||||||||||||
seq2  GTTGGCAGTTTTTATGTGCTTCTGCAGGCTGCTGA  935