BAC Information

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BAC

Clone NameB6Ng01-062F23
Chromosome6 (Build37)
Map Location 21,241,331 - 21,304,904
singlet/doubletdoublet
Overlap geneKcnd2
Upstream geneLOC100040838
Downstream geneLOC100041343, Tspan12, LOC100041358, Ing3, A430107O13Rik, LOC667307, Wnt16, D6Wsu176e
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-062F23.bB6Ng01-062F23.g
ACCDH882792DH882793
length1,2191,016
definitionDH882792|Mus musculus domesticus DNA, BAC clone: B6Ng01-062F23, 5' end.DH882793|Mus musculus domesticus DNA, BAC clone: B6Ng01-062F23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(21,241,331 - 21,242,084)(21,303,886 - 21,304,904)
sequence
gaattctcaacagagaatgtcaagtgactgggaagcaattaaagtaatat
tcaaagtcctcagtcatcagggaaatgcaaatcaaaacaactttgtcatt
ccatcttatactcatcagaacagttaagatcaaaaattcaatagcacata
ccgccaaggatgtggagcaactccattgctggtgggagtacaaacttgta
caaccactttagaaatcaactgggcattttctctgaaaactggaaataac
tctacctaaagaccaagctataccactcctgggcatatacccaaaagata
ctccaacatctctcggagtttattttgccatgcagttacagagggaggag
aggctgtcactgtggttcagaggaatggcagcaagtgacaggcatggcag
caggtgtaagatgctgatagattgcatctttaattgaaagttgaatgcac
agagtcaactggaattaaagcaaagttttaaattcctaacccacctctgg
tgagggacttcctccagtgaggctgcacctctccataacctgcaaacagc
tccatcaagtggtaccttagggttttcttgttgtgaagagacaccatgac
cacagcaattcttataaaagaaaacatttaattggagctggcttatagtc
ccaaggtttagtacattatgatcatttcacaaagcatggaggcatacaag
cagacattgtgctggaaactaagctgaactaaaatgtagaactaactaag
ttctacatcgggattggcaggtggcaggtaaagagtgtgccactagacct
ggcttctgaaaccccaaagcctaccccaagtgacacaccttctccaacat
ggcctcacctactccaacaaggctatatctccaaataacaccattcaata
taaacccatggggactattttgaatcaaatcaccacgcatgggaacttgg
tgtttaaatggctgaacctatggtaccagcagagtcaaatgataaacaaa
gaaatcacagttcactttaaatatgtctttatgtgtgcttcatatttttc
tgatgttgaactgtgttataaatatcttcagttgtcttaccaccttcacc
taaatcttctatcttaacggaaaattatttaactatactattacctctgc
agaagcattttagaatatagtttacaagaacctgaatctatgggactcga
attgcgttacttagaaaac
gaattctaataatgtattcaagaagtaaagttaaaatgcttccattatga
ttagctattgatgctcctgagttacttagccagatatcatgtacctctct
ggagtccacctggagaataataaagtataataaaatattctgtctttggt
tagaattgaattctaacgcatttccttgttgatacctgtacaagagaaat
gtactttccttaaatcatggaaatgaaaagtgaaagcctaaaccttacct
ttgtttttttttttttttttttgttttgtttttttttttttttttttttt
tttttttagcactaaccaatagccccccccccctgatgggaaccaataaa
cactctgtgaacctgatgggctaactaccgtatggaacttccccaaaagt
aatacttatgggtaaacccctcccatgaaataagtaaatccccctacttt
tttttttttttttttacatctaaaacccggcatgattctgcctttaaaaa
aaaattagtcacatgatgaaaatatcctcaaaaactatctgaaaaatcaa
aaaaatttttatataatctgttcttttaactttgaaatgaatgtaaaaat
ctctttgtatgcatttggcagaaacattctttcaacactgtgtgaatatt
tagggctcattttttttcccactttgcttgaaatgtttatataaatacac
acagaaatgtgtttcttcctctaacacaaatgttattgtggtcttcaaga
caaaccatcagaaaatgttttatttctttctgtgctgaattctaaacgtg
aatgttatttgagccatgatctttatacactggagcatcatcacttctga
gaaagtatcaagagtagctccctgaactctactggaatttgctgtatcag
ataatatcagtgactggctttgttatgctgacagtaccctgatatagcta
ttcttgtgaggctatgccagtgtctggcaaatacagaagtggatgctcaa
gtcatctttggatgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_21241331_21242084
seq2: B6Ng01-062F23.b_520_1264

seq1  GTTTTAAATTCCTAACCCACCTCTGGTGAGGGACTTCCTCCAGTGAGGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAAATTCCTAACCCACCTCTGGTGAGGGACTTCCTCCAGTGAGGCT  50

seq1  GCACCTCTCCATAACCTGCAAACAGCTCCATCAAGTGGTACCTTAGGGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCTCTCCATAACCTGCAAACAGCTCCATCAAGTGGTACCTTAGGGTT  100

seq1  TTCTTGTTGTGAAGAGACACCATGACCACAGCAATTCTTATAAAAGAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGTTGTGAAGAGACACCATGACCACAGCAATTCTTATAAAAGAAAA  150

seq1  CATTTAATTGGAGCTGGCTTATAGTCCCAAGGTTTAGTACATTATGATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAATTGGAGCTGGCTTATAGTCCCAAGGTTTAGTACATTATGATCA  200

seq1  TTTCACAAAGCATGGAGGCATACAAGCAGACATTGTGCTGGAAACTAAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACAAAGCATGGAGGCATACAAGCAGACATTGTGCTGGAAACTAAGC  250

seq1  TGAACTAAAATGTAGAACTAACTAAGTTCTACATCGGGATTGGCAGGTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTAAAATGTAGAACTAACTAAGTTCTACATCGGGATTGGCAGGTGG  300

seq1  CAGGTAAAGAGTGTGCCACTAGACCTGGCTTCTGAAACCCCAAAGCCTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTAAAGAGTGTGCCACTAGACCTGGCTTCTGAAACCCCAAAGCCTAC  350

seq1  CCCAAGTGACACACCTTCTCCAACATGGCCTCACCTACTCCAACAAGGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGTGACACACCTTCTCCAACATGGCCTCACCTACTCCAACAAGGCT  400

seq1  ATATCTCCAAATAACACCATTCAATATAAACCCATGGGGACTATTTTGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTCCAAATAACACCATTCAATATAAACCCATGGGGACTATTTTGAA  450

seq1  TCAAATCACCACGCATGGGAACTTGGTGTTTAAATGGCTGAACCTATGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATCACCACGCATGGGAACTTGGTGTTTAAATGGCTGAACCTATGGT  500

seq1  ACCAGCAGAGTCAAATGATAAACAAAGAAATCACAGTTCACTTTAAATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGCAGAGTCAAATGATAAACAAAGAAATCACAGTTCACTTTAAATAT  550

seq1  GTCTTTATGTGTGCTTCATA-TTTTCTGATGTTGAACTGTGTTAATAAAT  599
      |||||||||||||||||||| |||||||||||||||||||||| ||||||
seq2  GTCTTTATGTGTGCTTCATATTTTTCTGATGTTGAACTGTGTT-ATAAAT  599

seq1  ATCTTCAGTTGTCTTAACTACTTCAACTAAATCTTCATATCTTATACAGA  649
      |||||||||||||||| |  ||||| |||||||||| ||||||| || ||
seq2  ATCTTCAGTTGTCTTACCACCTTCACCTAAATCTTC-TATCTTA-ACGGA  647

seq1  AAATTATATTAACTATACTAATTACTCTGCAAGAAAGCATATTTAG-ATA  698
      ||||||| |||||||||||| |  |||||||   |||||| ||||| |||
seq2  AAATTAT-TTAACTATACTATTACCTCTGCA--GAAGCAT-TTTAGAATA  693

seq1  TAGTTTTACAAGACACTG-ATCTAATGTGACTCAGAATTGCGTATACATT  747
      ||| |||||||||  ||| |||| ||| ||||| ||||||||| ||| ||
seq2  TAG-TTTACAAGAACCTGAATCT-ATGGGACTC-GAATTGCGT-TAC-TT  738

seq1  AGAAAAC  754
      |||||||
seq2  AGAAAAC  745

seq1: chr6_21303886_21304904
seq2: B6Ng01-062F23.g_64_1079 (reverse)

seq1  TCCATCCAATAGATGACTGTGAGCATCCACTTCTGTATTTGCCAGGCACT  50
      ||||||||| |||||||| |||||||||||||||||||||||||| ||||
seq2  TCCATCCAA-AGATGACT-TGAGCATCCACTTCTGTATTTGCCAGACACT  48

seq1  GGCATAGCCTCACAAGAAATAGCTATATCAGGGTACTGTCAGCATAACAA  100
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GGCATAGCCTCACAAG-AATAGCTATATCAGGGTACTGTCAGCATAACAA  97

seq1  AGCCAGTCACTGATATTATCTGATACAGCAAATTCCAGTAGAGTTCAGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGTCACTGATATTATCTGATACAGCAAATTCCAGTAGAGTTCAGGG  147

seq1  AGCCTACTCTTGATACTTTCTCAGAAGTGACTGATGCTCCAGTGTATAAA  200
      || ||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AG-CTACTCTTGATACTTTCTCAGAAGTGA-TGATGCTCCAGTGTATAAA  195

seq1  GATCATGGCTC-AATAACATTCACGTTTAGAATTCAGCACAGAAAGAAAT  249
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GATCATGGCTCAAATAACATTCACGTTTAGAATTCAGCACAGAAAGAAAT  245

seq1  AAAACATTTCTCTGATGGTTTGTCTTGAAGACCAC-ATAACATTTGTGTT  298
      ||||||||| ||||||||||||||||||||||||| ||||||||||||||
seq2  AAAACATTT-TCTGATGGTTTGTCTTGAAGACCACAATAACATTTGTGTT  294

seq1  AGAGGAAGAAACACATTTCTGTGTGTATTTATATAAACATTTCAAGCAAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAAGAAACACATTTCTGTGTGTATTTATATAAACATTTCAAGCAAA  344

seq1  GTGGGAAAAAAAATGAGCCCTAAATATTCACACAGTGTTGAAAGAATGTA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GTGGGAAAAAAAATGAGCCCTAAATATTCACACAGTGTTGAAAGAATGTT  394

seq1  TCTGCCAAATGCATAACAAGAGATTTTTACATTCATATCAAAGTTAAAAG  448
      |||||||||||||||  ||||||||||||||||||| |||||||||||||
seq2  TCTGCCAAATGCATACAAAGAGATTTTTACATTCATTTCAAAGTTAAAAG  444

seq1  AACAGATTATATAAAAATATCTCTGATTTTTCAGATAGTTTCTGAGGATA  498
      |||||||||||||||||| | | |||||||||||||||||| ||||||||
seq2  AACAGATTATATAAAAATTTTTTTGATTTTTCAGATAGTTTTTGAGGATA  494

seq1  TTTTCATCATGTGACTAATTTTTTTCTAAAGGCAGAATCATGACAGGTAT  548
      ||||||||||||||||||||||||| |||||||||||||||| | ||| |
seq2  TTTTCATCATGTGACTAATTTTTTTTTAAAGGCAGAATCATGCCGGGTTT  544

seq1  TAGATGTAAAAAAAAAAAAAAAAAAGTAGGAGGATTTACTTATTTCATGG  598
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TAGATGTAAAAAAAAAAAAAAAAAAGTAGGGGGATTTACTTATTTCATGG  594

seq1  GAGTGGTTTAGCCATAAGTATTACTTCTGGGGAAGTTCCATACGGTAGTT  648
      ||| |||||| ||||||||||||||| |||||||||||||||||||||||
seq2  GAGGGGTTTACCCATAAGTATTACTTTTGGGGAAGTTCCATACGGTAGTT  644

seq1  AGACCATCAGGTTCACAGAGTGTCTATTGGTTACCATCATGGTGGTGTGG  698
      || |||||||||||||||||||| |||||||| |||||| || || | ||
seq2  AGCCCATCAGGTTCACAGAGTGTTTATTGGTTCCCATCAGGGGGGGGGGG  694

seq1  CTATTGGTTAGTGCT-AAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAC  747
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CTATTGGTTAGTGCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAC  744

seq1  AAAAAAAAAAAAAAAAAAACAAAGGTAAGGTTTAGGCTTTCACTTTTCAT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAAAAAAACAAAGGTAAGGTTTAGGCTTTCACTTTTCAT  794

seq1  TTCCATGATTTAAGGAAAGTACATTTCTCTTGTACAGGTATCAACAAGGA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATGATTTAAGGAAAGTACATTTCTCTTGTACAGGTATCAACAAGGA  844

seq1  AATGCGTTAGAATTCAATTCTAACCAAAGACAGAATATTTTATTATACTT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCGTTAGAATTCAATTCTAACCAAAGACAGAATATTTTATTATACTT  894

seq1  TATTATTCTCCAGGTGGACTCCAGAGAGGTACATGATATCTGGCTAAGTA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTCTCCAGGTGGACTCCAGAGAGGTACATGATATCTGGCTAAGTA  944

seq1  ACTCAGGAGCATCAATAGCTAATCATAATGGAAGCATTTTAACTTTACTT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGGAGCATCAATAGCTAATCATAATGGAAGCATTTTAACTTTACTT  994

seq1  CTTGAATACATTATTAGAATTC  1019
      ||||||||||||||||||||||
seq2  CTTGAATACATTATTAGAATTC  1016