BAC Information

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BAC

Clone NameB6Ng01-062K21
Chromosome6 (Build37)12 (Build37)
Map Location 18,835,442 - 18,835,96850,334,564 - 50,335,640
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-062K21.bB6Ng01-062K21.g
ACCDH883003DH883004
length9991,069
definitionDH883003|Mus musculus domesticus DNA, BAC clone: B6Ng01-062K21, 5' end.DH883004|Mus musculus domesticus DNA, BAC clone: B6Ng01-062K21, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,442 - 18,835,968)(50,334,564 - 50,335,640)
sequence
gaattgtttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccatcttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacactataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgtgattccagaca
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttccttaatttctttcttcagagatttgaagtttttataata
cagatctttcacttccttagttagagtcacgccagatattttatattatt
tgtgactattgagaaggtgttgtttccctatttctttctcagcctgtta
gaattcctgaaaataatcctagaacataagcatttctctgcttagttatt
gtttggctaacctgtccattggtaagaggcaggtattaaagtctcacact
atcagtgtatgatggtctatgtgtgattaaagctatattcgtgattcttt
tacaaacgtaggtgcttttgcatttccggactacatgttaagaactgaaa
ggtcatctgggtggacttttgtctttgataagtatgtagtttcattccca
gctcttcagattagttttagttttgtcaagtattggaatggctacttcag
cttgtgttttaggttaatttgcttgagatatctttttctaatactttacc
ccaaagtaatgtctttcttttgcattgaggtattttccttggattcagca
gaaggacaagtgtagcctccctcagccttgaagcaggctgattcagactt
tgaccttgctgcctctaagaaggagattacctagggtggagccttctgac
ctacagggctctattgttttgtcacctgccgctgctctcctccaagacac
tgctacctgctgagaggcccctgagatattccagaggcacattctatcct
gcacatcactggcaggctggcttcagacaccagaatggactggcgggaga
atgggccttccccctttatttttatttttacttttttatgaaaatttaat
gacttttatttgagcacctactgtatgccagacattgttgacagctttca
aagcctccttattttcattgtgcatacaaagaaatgagtttcagagatgt
taagcaacttgttcaaaagccttctccctttataagcacagtttctgagt
aaaattgcaggccttgatcagcacattgtcttggttctttctttctcgct
gtctaatctcttcaacctcagcctgcctcccagtggtacccgggtcttgt
aggccgagggccggcttacaacagacaatcttgttttcttctgtatctgg
taatctggtgtttttattgggaaatgagattgtggtgttgagagaataaa
gggctatgatggttgattc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835442_18835968
seq2: B6Ng01-062K21.b_45_572 (reverse)

seq1  CCAGAGATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50

seq1  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  100

seq1  ACAACTGGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCT  150
      |||||||||||||||  |||||||||||| ||||||||||||||||||||
seq2  ACAACTGGTTGTTATAGTGTAGAAGAATGCGAATCGATCCATACTTATCT  150

seq1  CCATGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  200
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  200

seq1  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250

seq1  TGGGCAGAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTG  299
      |||||| ||||||||| ||||||||||||||||||||||| |||||||| 
seq2  TGGGCACAGGGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTA  300

seq1  AGGTAGAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  349
      || | |||||| ||||||||||||||||||||||||||||||||||||||
seq2  AGATCGAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  350

seq1  GGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAA  400

seq1  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  450

seq1  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAA  499
      ||||||||||||||| ||||||||||||||||||||||||||||||| ||
seq2  AAAGAACTCAAGAAGATGGACTTCAGAAAATCAAATAACCCCATTAAAAA  500

seq1  ATGGGGCTCAGAACTGAACAAAGAATTC  527
      |||||||||||||||||||||| |||||
seq2  ATGGGGCTCAGAACTGAACAAACAATTC  528

seq1: chr12_50334564_50335640
seq2: B6Ng01-062K21.g_65_1133

seq1  GAATTCCTGAAAATAATCCTAGAACATAAGCATTTCTCTGCTTAGTTATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGAAAATAATCCTAGAACATAAGCATTTCTCTGCTTAGTTATT  50

seq1  GTTTGGCTAACCTGTCCATTGGTAAGAGGCAGGTATTAAAGTCTCACACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGCTAACCTGTCCATTGGTAAGAGGCAGGTATTAAAGTCTCACACT  100

seq1  ATCAGTGTATGATGGTCTATGTGTGATTAAAGCTATATTCGTGATTCTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTGTATGATGGTCTATGTGTGATTAAAGCTATATTCGTGATTCTTT  150

seq1  TACAAACGTAGGTGCTTTTGCATTTCCGGACTACATGTTAAGAACTGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAACGTAGGTGCTTTTGCATTTCCGGACTACATGTTAAGAACTGAAA  200

seq1  GGTCATCTGGGTGGACTTTTGTCTTTGATAAGTATGTAGTTTCATTCCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATCTGGGTGGACTTTTGTCTTTGATAAGTATGTAGTTTCATTCCCA  250

seq1  GCTCTTCAGATTAGTTTTAGTTTTGTCAAGTATTGGAATGGCTACTTCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTCAGATTAGTTTTAGTTTTGTCAAGTATTGGAATGGCTACTTCAG  300

seq1  CTTGTGTTTTAGGTTAATTTGCTTGAGATATCTTTTTCTAATACTTTACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGTTTTAGGTTAATTTGCTTGAGATATCTTTTTCTAATACTTTACC  350

seq1  CCAAAGTAATGTCTTTCTTTTGCATTGAGGTATTTTCCTTGGATTCAGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGTAATGTCTTTCTTTTGCATTGAGGTATTTTCCTTGGATTCAGCA  400

seq1  GAAGGACAAGTGTAGCCTCCCTCAGCCTTGAAGCAGGCTGATTCAGACTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGACAAGTGTAGCCTCCCTCAGCCTTGAAGCAGGCTGATTCAGACTT  450

seq1  TGACCTTGCTGCCTCTAAGAAGGAGATTACCTAGGGTGGAGCCTTCTGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTTGCTGCCTCTAAGAAGGAGATTACCTAGGGTGGAGCCTTCTGAC  500

seq1  CTACAGGGCTCTATTGTTTTGTCACCTGCCGCTGCTCTCCTCCAAGACAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGGGCTCTATTGTTTTGTCACCTGCCGCTGCTCTCCTCCAAGACAC  550

seq1  TGCTACCTGCTGAGAGGCCCCTGAGATATTCCAGAGGCACATTCTATCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTACCTGCTGAGAGGCCCCTGAGATATTCCAGAGGCACATTCTATCCT  600

seq1  GCACATCACTGGCAGGCTGGCTTCAGACACCAGAATGGACTGGCGGGAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATCACTGGCAGGCTGGCTTCAGACACCAGAATGGACTGGCGGGAGA  650

seq1  ATGGGCCTTCCCCCTTTATTTTTATTTTTACTTTTTTATGAAAATTTAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCCTTCCCCCTTTATTTTTATTTTTACTTTTTTATGAAAATTTAAT  700

seq1  GACTTTTATTTGAGCACCTACTGTATGCCAGACATTGTTGACAGCTTTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTTATTTGAGCACCTACTGTATGCCAGACATTGTTGACAGCTTTCA  750

seq1  AAGCCTCCTTATTTTCATTGTGCATACAAAGAAATGAGTTTCAGAGATGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTCCTTATTTTCATTGTGCATACAAAGAAATGAGTTTCAGAGATGT  800

seq1  TAAGCAACTTGTTCAAAAGCCTTCCCCCTTTATAAGCACAGTTTCTGAGT  850
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TAAGCAACTTGTTCAAAAGCCTTCTCCCTTTATAAGCACAGTTTCTGAGT  850

seq1  AAAATTGCAGGCCTTGATCAGCACATTGTCTTGGCTTCTTTCTTTTCTCG  900
      |||||||||||||||||||||||||||||||||| ||||||| |||||||
seq2  AAAATTGCAGGCCTTGATCAGCACATTGTCTTGG-TTCTTTC-TTTCTCG  898

seq1  CTGTCTAATCTCTTTCAACCCCAGCCTGCCTCCCAGGTGTACCCGGTTCT  950
      |||||||||||| ||||||| |||||||||||||||  |||||||| |||
seq2  CTGTCTAATCTC-TTCAACCTCAGCCTGCCTCCCAGTGGTACCCGGGTCT  947

seq1  TGTAGGCCGAGGGCCGGCTTACAACAGACAAATCTTGTTTTCTTCTGTAT  1000
      ||||||||||||||||||||||||||||| ||||||||||||||||||| 
seq2  TGTAGGCCGAGGGCCGGCTTACAACAGAC-AATCTTGTTTTCTTCTGTA-  995

seq1  TCTGTTAATCT-GTGTCTTTTATTGGGAAATTGAGATTGTTGGTGTTGAG  1049
      |||| |||||| |||| ||||||||||||| |||||||| ||||||||||
seq2  TCTGGTAATCTGGTGT-TTTTATTGGGAAA-TGAGATTG-TGGTGTTGAG  1042

seq1  AGATATAAGGGCTAATGATGGTTGATTC  1077
      |||   ||||||| ||||||||||||||
seq2  AGAATAAAGGGCT-ATGATGGTTGATTC  1069