BAC Information

Click to search

BAC

Clone NameB6Ng01-063B01
Chromosome6 (Build37)
Map Location 134,174,959 - 134,204,639
singlet/doubletdoublet
Overlap geneEtv6
Upstream gene5530400C23Rik, EG545884, EG626372, LOC100043649, LOC100043653, EG545886, LOC622962, Kap, LOC100043655, LOC100043656, LOC668063
Downstream geneLOC100043660, Bcl2l14, Lrp6, Mansc1, Loh12cr1, LOC100043884, Dusp16, Crebl2, Gpr19, Cdkn1b, 1190002F15Rik, Apold1, Ddx47, Gprc5a, Gprc5d, LOC100043668, Hebp1, 8430419L09Rik, Gsg1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-063B01.bB6Ng01-063B01.g
ACCDH883275DH883276
length1,1521,153
definitionDH883275|Mus musculus domesticus DNA, BAC clone: B6Ng01-063B01, 5' end.DH883276|Mus musculus domesticus DNA, BAC clone: B6Ng01-063B01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(134,203,456 - 134,204,639)(134,174,959 - 134,176,135)
sequence
gaattctaagtcttattgggtgtagttaagtcaactgaataatggcatcc
tgaaagaagctcaagtttgacaagattgaaatactgcaacacaagttatc
aggtgctcacaagaaagaaaagaacccagccaccgtatgtcaagggcttt
gactaaattagcaaatgagctaagaatgagctatgaagctggatgtagtg
gttcaagcccatcatctcagcactcaggaggctgacataggattagggtc
agcctgggctactggattttaaaaaacagacaaattgtgggttataagat
gaatgtcagagaactaatgaatctttccttggaagatatttagattaagg
tcacgaaagggacaaatataaaatccacttaagagaaaatcaaaatgacc
aaaaaaaaaaaaaaagacttgtctgagcccagtgtgatggtatccacctg
taatcccagttcaggaggttgaggcaggaggatcaaagcactggtcaatc
ttgtgtctttcacatagagaaatgtctcgcacattgtaaatacatgatca
tttttgaataaataaacaaatgtgactacaaattcaaatgtgcaaagaag
cgacgttactgagctgttttctttattctaacggtgccatcgcggctgtg
ccgtactgttcagtgagcatggcctgcagccctgaactgtctactggctg
acatagtttgttattgtccttttcacgtgactcagacatgcctcgtcacc
taaagtgtgcatttcctccccagcaagaactatacttcctgtatcctcag
cctaaattatgtctgaggtcctcagaatactgactgttcatggggggcac
cccactttttatgtacaaggccaattggcaaatatctaagacgtttggcc
agagcgctctgaagtgactcaactgtattcatgcctggtcatggtttgaa
agcagacatagacgataatttaatacaaatgtggctggctttccccataa
ctcatttacagaatcagtggtgctacacttgcagcttcatctgtgaacgt
ctctggtagagttttgggtgggatgggaccagcctgaggctgcatacgat
gtagtgaactctcagttcatcctggtaagtcgcttctactgactcaccag
tc
gaattcacagtggaactccacagaggtgagctgcagtctccatttttaaa
attaatttatttatttattcactttgcaacccaatatcagcccttctttt
tttcccagtaccccttcacacaagtcctcccccgattccacattctcatc
atttgagaaggggaagcccctgtctaggtgtcatgccctactcagggtgt
cgcacacacccccataaggagctcgcacacacaagtgtgcacacatacac
acacggccagactaggtgcatcctctcccactaaggccagacaaggtggt
ccctttagggactcaggatctacaggaagacaggtaacaggctcagggac
agccgtgatccagttgttgggcaaccacatgaagaccaagcggctcatct
gctgtatatgtgcaagcgacctagctatggcctgtggttggtgatttagt
ctctggactctcccaagggtcctggttagttgactctgctggtcaccctg
tggaatcgctatccactttgggtccctcaatccttctctagactctccca
taagactccccgagctccatctaatgtttggctgtgagactctgcatctc
tttccatctctactgctgggcggaggcagactccattcttaaaccatcca
caagcagaaaggacccagcaaagggagtttctgacaagcctaaaacgtat
gcctcccacaccaggcctgcttttacttatttcattttctctatttcata
attggtcaaaaggaaaccaaaatttctaagtcaaaatgaaatagaaacaa
gaagtgtttgcgaactgaggggtatgctgccggagatgactatccgtttg
ccaagagtatgggcatagcgaatcatcgcctgcaaggtacacacttcacc
agtgttaaggtccacgctccgcccactagcccagaagaaacggcaagctc
cagggagactcctcagtagccgatggccacttacgtagtggccatccagt
cccagccttgtgatcaccagcagcatataatggagagctccgactatcac
agcttcacagtattcatcctaagaaaatttcccagaatattccaagttga
aagaaaatgtcttgtgcttcatttaacagtaaacagaaatggccaaccac
ccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_134203456_134204639
seq2: B6Ng01-063B01.b_47_1198 (reverse)

seq1  GACTGAGTGAGTTCAGTAGAAGCGACTTTTACAGGGAATGGAACTGAGAG  50
      ||||| ||||| ||||||||||||||  ||||  |||   ||||||||||
seq2  GACTG-GTGAG-TCAGTAGAAGCGAC--TTACCAGGA--TGAACTGAGAG  44

seq1  TCACCTACATCGGTAATGCAGCCTCAAGCCTGTGTCCCCATCCCACCCCA  100
      |   ||||||||   ||||||||||| ||   ||  |||||||||||| |
seq2  TTCACTACATCG--TATGCAGCCTCAGGC---TGGTCCCATCCCACCCAA  89

seq1  AATACTTCTACCCAGAGACGTCTCAACAAGGATTGGAAGCCTTGGCCAAA  150
      ||    |||| |||||||||| || |||  |||  |||||  ||    ||
seq2  AA---CTCTA-CCAGAGACGT-TC-ACA--GAT--GAAGC--TG---CAA  124

seq1  GTGTAGCCACCACCTGATTCTGTAAATGAGTTTATGGGGGAAAGCCAGCC  200
      |||||| ||||| ||||||||||||||||| |||| ||||||||||||||
seq2  GTGTAG-CACCA-CTGATTCTGTAAATGAG-TTAT-GGGGAAAGCCAGCC  170

seq1  ACATTTGTATTAAATTATCGTCTATGTCTGCTTTCAAACCATGACCCAGG  250
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  ACATTTGTATTAAATTATCGTCTATGTCTGCTTTCAAACCATGA-CCAGG  219

seq1  CATGAATACAGTTGAGTCACTTCAGAGCGCCTCTGGCCAAACGTCTTAGA  300
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CATGAATACAGTTGAGTCACTTCAGAGCG-CTCTGGCCAAACGTCTTAGA  268

seq1  TATTTGCCAATTGGCCTTGTACATAAAAAGTGGGGTGCCCCCCATGAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGCCAATTGGCCTTGTACATAAAAAGTGGGGTGCCCCCCATGAACA  318

seq1  GTCAGTATTCTGAGGACCTCAGACATAATTTAGGCTGAGGATACAGGAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGTATTCTGAGGACCTCAGACATAATTTAGGCTGAGGATACAGGAAG  368

seq1  TATAGTTCTTGCTGGGGAGGAAATGCACACTTTAGGTGACGAGGCATGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTTCTTGCTGGGGAGGAAATGCACACTTTAGGTGACGAGGCATGTC  418

seq1  TGAGTCACGTGAAAAGGACAATAACAAACTATGTCAGCCAGTAGACAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTCACGTGAAAAGGACAATAACAAACTATGTCAGCCAGTAGACAGTT  468

seq1  CAGGGCTGCAGGCCATGCTCACTGAACAGTACGGCACAGCCGCGATGGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCTGCAGGCCATGCTCACTGAACAGTACGGCACAGCCGCGATGGCA  518

seq1  CCGTTAGAATAAAGAAAACAGCTCAGTAACGTCGCTTCTTTGCACATTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTTAGAATAAAGAAAACAGCTCAGTAACGTCGCTTCTTTGCACATTTG  568

seq1  AATTTGTAGTCACATTTGTTTATTTATTCAAAAATGATCATGTATTTACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGTAGTCACATTTGTTTATTTATTCAAAAATGATCATGTATTTACA  618

seq1  ATGTGCGAGACATTTCTCTATGTGAAAGACACAAGATTGACCAGTGCTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCGAGACATTTCTCTATGTGAAAGACACAAGATTGACCAGTGCTTT  668

seq1  GATCCTCCTGCCTCAACCTCCTGAACTGGGATTACAGGTGGATACCATCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCTCCTGCCTCAACCTCCTGAACTGGGATTACAGGTGGATACCATCA  718

seq1  CACTGGGCTCAGACAAGTCTTTTTTTTTTTTTTTGGTCATTTTGATTTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGGCTCAGACAAGTCTTTTTTTTTTTTTTTGGTCATTTTGATTTTC  768

seq1  TCTTAAGTGGATTTTATATTTGTCCCTTTCGTGACCTTAATCTAAATATC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAAGTGGATTTTATATTTGTCCCTTTCGTGACCTTAATCTAAATATC  818

seq1  TTCCAAGGAAAGATTCATTAGTTCTCTGACATTCATCTTATAACCCACAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAGGAAAGATTCATTAGTTCTCTGACATTCATCTTATAACCCACAA  868

seq1  TTTGTCTGTTTTTTAAAATCCAGTAGCCCAGGCTGACCCTAATCCTATGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTGTTTTTTAAAATCCAGTAGCCCAGGCTGACCCTAATCCTATGT  918

seq1  CAGCCTCCTGAGTGCTGAGATGATGGGCTTGAACCACTACATCCAGCTTC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTCCTGAGTGCTGAGATGATGGGCTTGAACCACTACATCCAGCTTC  968

seq1  ATAGCTCATTCTTAGCTCATTTGCTAATTTAGTCAAAGCCCTTGACATAC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTCATTCTTAGCTCATTTGCTAATTTAGTCAAAGCCCTTGACATAC  1018

seq1  GGTGGCTGGGTTCTTTTCTTTCTTGTGAGCACCTGATAACTTGTGTTGCA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCTGGGTTCTTTTCTTTCTTGTGAGCACCTGATAACTTGTGTTGCA  1068

seq1  GTATTTCAATCTTGTCAAACTTGAGCTTCTTTCAGGATGCCATTATTCAG  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTCAATCTTGTCAAACTTGAGCTTCTTTCAGGATGCCATTATTCAG  1118

seq1  TTGACTTAACTACACCCAATAAGACTTAGAATTC  1184
      ||||||||||||||||||||||||||||||||||
seq2  TTGACTTAACTACACCCAATAAGACTTAGAATTC  1152

seq1: chr6_134174959_134176135
seq2: B6Ng01-063B01.g_65_1217

seq1  GAATTCACAGTGGAACTCCACAGAGGTGAGCTGCAGTCTCCATTTTTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGTGGAACTCCACAGAGGTGAGCTGCAGTCTCCATTTTTAAA  50

seq1  ATTAATTTATTTATTTATTCACTTTGCAACCCAATATCAGCCCTTCTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTTATTTATTTATTCACTTTGCAACCCAATATCAGCCCTTCTTTT  100

seq1  TTTCCCAGTACCCCTTCACACAAGTCCTCCCCCGATTCCACATTCTCATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCAGTACCCCTTCACACAAGTCCTCCCCCGATTCCACATTCTCATC  150

seq1  ATTTGAGAAGGGGAAGCCCCTGTCTAGGTGTCATGCCCTACTCAGGGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAGAAGGGGAAGCCCCTGTCTAGGTGTCATGCCCTACTCAGGGTGT  200

seq1  CGCACACACCCCCATAAGGAGCTCGCACACACAAGTGTGCACACATACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCACACACCCCCATAAGGAGCTCGCACACACAAGTGTGCACACATACAC  250

seq1  ACACGGCCAGACTAGGTGCATCCTCTCCCACTAAGGCCAGACAAGGTGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACGGCCAGACTAGGTGCATCCTCTCCCACTAAGGCCAGACAAGGTGGT  300

seq1  CCCTTTAGGGACTCAGGATCTACAGGAAGACAGGTAACAGGCTCAGGGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTAGGGACTCAGGATCTACAGGAAGACAGGTAACAGGCTCAGGGAC  350

seq1  AGCCGTGATCCAGTTGTTGGGCAACCACATGAAGACCAAGCGGCTCATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCGTGATCCAGTTGTTGGGCAACCACATGAAGACCAAGCGGCTCATCT  400

seq1  GCTGTATATGTGCAAGCGACCTAGCTATGGCCTGTGGTTGGTGATTTAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTATATGTGCAAGCGACCTAGCTATGGCCTGTGGTTGGTGATTTAGT  450

seq1  CTCTGGACTCTCCCAAGGGTCCTGGTTAGTTGACTCTGCTGGTCACCCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGACTCTCCCAAGGGTCCTGGTTAGTTGACTCTGCTGGTCACCCTG  500

seq1  TGGAATCGCTATCCACTTTGGGTCCCTCAATCCTTCTCTAGACTCTCCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATCGCTATCCACTTTGGGTCCCTCAATCCTTCTCTAGACTCTCCCA  550

seq1  TAAGACTCCCCGAGCTCCATCTAATGTTTGGCTGTGAGACTCTGCATCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACTCCCCGAGCTCCATCTAATGTTTGGCTGTGAGACTCTGCATCTC  600

seq1  TTTCCATCTCTACTGCTGGGCGGAGGCAGACTCCATTCTTAAACCATCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCATCTCTACTGCTGGGCGGAGGCAGACTCCATTCTTAAACCATCCA  650

seq1  CAAGCAGAAAGGACCCAGCAAAGGGAGTTTCTGACAAGCCTAAAACGTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCAGAAAGGACCCAGCAAAGGGAGTTTCTGACAAGCCTAAAACGTAT  700

seq1  GCCTCCCACACCAGGCCTGCTTTTACTTATTTCATTTTCTCTATTTCATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCCACACCAGGCCTGCTTTTACTTATTTCATTTTCTCTATTTCATA  750

seq1  ATTGGTCAAAAGGAAACCAAAATTTCTAAGTCAAAATGAAATAGAAACAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGTCAAAAGGAAACCAAAATTTCTAAGTCAAAATGAAATAGAAACAA  800

seq1  GAAGTGTTTGCGAACTGAGGGGTATGCTGCCGGAGATGACTATCCGTTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGTTTGCGAACTGAGGGGTATGCTGCCGGAGATGACTATCCGTTTG  850

seq1  CCAAGAGTATGGGCATAGCGAATCATCGCCTGCAAGGTACACACTTCACC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAGTATGGGCATAGCGAATCATCGCCTGCAAGGTACACACTTCACC  900

seq1  AGTGTTAAGGTTCCACGCTCCGCCCACTAGCCCAG-AGAAACGGCAAGCT  949
      |||||||||| |||||||||||||||||||||||| ||||||||||||||
seq2  AGTGTTAAGG-TCCACGCTCCGCCCACTAGCCCAGAAGAAACGGCAAGCT  949

seq1  CAGGGGAGACTCTCAAGTAGCCGATGG-CACTTACGTAGTGGCCATCCAG  998
      |  |||||||||   |||||||||||| ||||||||||||||||||||||
seq2  CCAGGGAGACTCCTCAGTAGCCGATGGCCACTTACGTAGTGGCCATCCAG  999

seq1  TCCCAGCCTTGTGATCACCAGCAGCATATAAT-GAGAGCTTCCGAACTAA  1047
      |||||||||||||||||||||||||||||||| |||||| |||| ||| |
seq2  TCCCAGCCTTGTGATCACCAGCAGCATATAATGGAGAGC-TCCG-ACT-A  1046

seq1  TCACAGCCTTTCACCAGTAATTCCATTCCTAAGAAAATATCCCAAGGAAA  1097
      |||||||  |||| |||| ||||   |||||||||||| |||||  ||| 
seq2  TCACAGC--TTCA-CAGT-ATTC--ATCCTAAGAAAATTTCCCA--GAA-  1087

seq1  TTATCCCATAGTGGACAAAGAAAATGTCCTTTTGTGCTTCTATTTATAAC  1147
       ||| ||| ||| |  ||||||||||||   ||||||||| |||  ||||
seq2  -TATTCCA-AGTTG--AAAGAAAATGTC---TTGTGCTTC-ATT--TAAC  1127

seq1  AGTAAAAACCAGAAATAGCCCAACCACCCC  1177
      ||||||   ||||||| | |||||||||||
seq2  AGTAAA---CAGAAAT-GGCCAACCACCCC  1153