BAC Information

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BAC

Clone NameB6Ng01-063F15
Chromosome6 (Build37)3 (Build37)
Map Location 18,835,442 - 18,835,96824,232,742 - 24,233,815
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-063F15.bB6Ng01-063F15.g
ACCDH883475DH883476
length9471,067
definitionDH883475|Mus musculus domesticus DNA, BAC clone: B6Ng01-063F15, 5' end.DH883476|Mus musculus domesticus DNA, BAC clone: B6Ng01-063F15, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,442 - 18,835,968)(24,232,742 - 24,233,815)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcgattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgagcttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctggatcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagatttgaagtttttatcata
cagatctttcacctccttagttagagtcacgccaagatattttatat
gaattcttgtttgtcattgcagcactaggcctgttttgatagctatgagt
tcagtgcttaaggttatattatgtcaagttgaatagtagtggaggaagat
acttgaaagtatgaattcttatgatgaagtttctttagattggcccattt
ctatgagcttacagacatgatctttatcttaagcatccttctgtattttg
gaaagttgtgttaaacaaagtggggaacatgagacatgagcaggacaact
atagttatggcagatgccagcagaattcttacatttctgcctggtgtata
attggcatatactctgtccacagagttacgctgaggtgtcagctctttaa
tcccttctcggggcaatgtcaacacactgaccacaataattcagcatcac
cacagtatgtacagaatctgtgttcttttcacccaccattgcctaaacac
gtatctttgtggccactctacaagtatcaaggcaatttaaataacactta
tataatttcaccaaccaataaagatttttctaaactaattctttcatttg
tttgttgttgttgttgtttgcctgtatatggtgctgactttaatcttgaa
atcaagtctgcagttacttgcgtgttctttaactttcttcatttggtaat
attctcaaagtacattattttgtactcttggcactgattctacctagtca
gcttgtcaggtaattttggccataccttatgtagaagtgctgcagaagag
attccatcgtttttagagtgctcatcaaaaggaatctatttttgatgtgt
tttagttcccatgatgccacccatagggccctcagttttgtacttatcag
ttttctctgtagtgcctgctgtgatcaccctggtgattaggagacattaa
gcacttcttttcttttacccctccccaatttgagaaatgttcatgatctc
atatactataataattgcaggactttggtgcaaatgatttgatatttcta
gaattctttaggacagctgttctgaaatttctttgttgaactttctttca
agcctcaattgggataa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835442_18835968
seq2: B6Ng01-063F15.b_46_573 (reverse)

seq1  CCAGAGATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50

seq1  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  100

seq1  ACAACTGGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCT  150
      |||||||||||||||| |||||||||||| ||||||||||||||||||||
seq2  ACAACTGGTTGTTATCGTGTAGAAGAATGCGAATCGATCCATACTTATCT  150

seq1  CCATGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  200
      || ||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CCTTGTACTAAGCTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  200

seq1  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250

seq1  TGGGCAGAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTG  299
      |||||| ||||||||| ||||||||||||||||||||||| |||||||| 
seq2  TGGGCACAGGGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTA  300

seq1  AGGTAGAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  349
      || | |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCGAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  350

seq1  GGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAA  400

seq1  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  450

seq1  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAAAAA  500

seq1  ATGGGGCTCAGAACTGAACAAAGAATTC  527
      ||||||||||||||||||||||||||||
seq2  ATGGGGCTCAGAACTGAACAAAGAATTC  528

seq1: chr3_24232742_24233815
seq2: B6Ng01-063F15.g_68_1134 (reverse)

seq1  TTATCCCAATATGAGGCTAGAAAGAAAGTTCAACAAAGAAATTTCAAGAA  50
      |||||||||| ||||||| |||||||||||||||||||||||||| ||||
seq2  TTATCCCAAT-TGAGGCTTGAAAGAAAGTTCAACAAAGAAATTTC-AGAA  48

seq1  CAGCCTGTCTAAAGGAATTCTAGAAATATCAAATCATTTGGCACATAGTC  100
      ||| |||||  || ||||||||||||||||||||||||||   || ||||
seq2  CAG-CTGTCCTAAAGAATTCTAGAAATATCAAATCATTTGCACCAAAGTC  97

seq1  CTGCAATTATTATAGTATATGAGAATCATTGAACATTTCTCAAATTGGGG  150
      ||||||||||||||||||||||| |||| ||||||||||||||||| |||
seq2  CTGCAATTATTATAGTATATGAG-ATCA-TGAACATTTCTCAAATT-GGG  144

seq1  GAGGGGTTAAAAGAAAAGAAGGTGCTTAATGTCTCCT-ATCA-CAGGGTG  198
      |||||| ||||||||||||| |||||||||||||||| |||| |||||||
seq2  GAGGGG-TAAAAGAAAAGAA-GTGCTTAATGTCTCCTAATCACCAGGGTG  192

seq1  ATCACAGCAGGCACTAACAGAGAAAACTGATAAGTACAAAACTGAGGGCC  248
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  ATCACAGCAGGCACT-ACAGAGAAAACTGATAAGTACAAAACTGAGGGCC  241

seq1  CTATGGGTGGCATCATGGGAACTAAAACACATCAAAAATAGATTCCTTTT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGGGTGGCATCATGGGAACTAAAACACATCAAAAATAGATTCCTTTT  291

seq1  GATGAGCACTCTAAAAACGATGGAATCTCTTCTGCAGCACTTCTACATAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGCACTCTAAAAACGATGGAATCTCTTCTGCAGCACTTCTACATAA  341

seq1  GGTATGGCCAAAATTACCTGACAAGCTGACTAGGTAGAATCAGTGCCAAG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATGGCCAAAATTACCTGACAAGCTGACTAGGTAGAATCAGTGCCAAG  391

seq1  AGTACAAAATAATGTACTTTGAGAATATTACCAAATGAAGAAAGTTAAAG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACAAAATAATGTACTTTGAGAATATTACCAAATGAAGAAAGTTAAAG  441

seq1  AACACGCAAGTAACTGCAGACTTGATTTCAAGATTAAAGTCAGCACCATA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACGCAAGTAACTGCAGACTTGATTTCAAGATTAAAGTCAGCACCATA  491

seq1  TACAGGCAAACAACAACAACAACAAACAAATGAAAGAATTAGTTTAGAAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGCAAACAACAACAACAACAAACAAATGAAAGAATTAGTTTAGAAA  541

seq1  AATCTTTATTGGTTGGTGAAATTATATAAGTGTTATTTAAATTGCCTTGA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTTATTGGTTGGTGAAATTATATAAGTGTTATTTAAATTGCCTTGA  591

seq1  TACTTGTAGAGTGGCCACAAAGATACGTGTTTAGGCAATGGTGGGTGAAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGTAGAGTGGCCACAAAGATACGTGTTTAGGCAATGGTGGGTGAAA  641

seq1  AGAACACAGATTCTGTACATACTGTGGTGATGCTGAATTATTGTGGTCAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACACAGATTCTGTACATACTGTGGTGATGCTGAATTATTGTGGTCAG  691

seq1  TGTGTTGACATTGCCCCGAGAAGGGATTAAAGAGCTGACACCTCAGCGTA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTGACATTGCCCCGAGAAGGGATTAAAGAGCTGACACCTCAGCGTA  741

seq1  ACTCTGTGGACAGAGTATATGCCAATTATACACCAGGCAGAAATGTAAGA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGTGGACAGAGTATATGCCAATTATACACCAGGCAGAAATGTAAGA  791

seq1  ATTCTGCTGGCATCTGCCATAACTATAGTTGTCCTGCTCATGTCTCATGT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGCTGGCATCTGCCATAACTATAGTTGTCCTGCTCATGTCTCATGT  841

seq1  TCCCCACTTTGTTTAACACAACTTTCCAAAATACAGAAGGATGCTTAAGA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCACTTTGTTTAACACAACTTTCCAAAATACAGAAGGATGCTTAAGA  891

seq1  TAAAGATCATGTCTGTAAGCTCATAGAAATGGGCCAATCTAAAGAAACTT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGATCATGTCTGTAAGCTCATAGAAATGGGCCAATCTAAAGAAACTT  941

seq1  CATCATAAGAATTCATACTTTCAAGTATCTTCCTCCACTACTATTCAACT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATAAGAATTCATACTTTCAAGTATCTTCCTCCACTACTATTCAACT  991

seq1  TGACATAATATAACCTTAAGCACTGAACTCATAGCTATCAAAACAGGCCT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATAATATAACCTTAAGCACTGAACTCATAGCTATCAAAACAGGCCT  1041

seq1  AGTGCTGCAATGACAAACAAGAATTC  1074
      ||||||||||||||||||||||||||
seq2  AGTGCTGCAATGACAAACAAGAATTC  1067