BAC Information

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BAC

Clone NameB6Ng01-063H08
Chromosome6 (Build37)11 (Build37)
Map Location 18,835,442 - 18,835,96889,705,255 - 89,705,896
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-063H08.bB6Ng01-063H08.g
ACCDH883544DH883545
length941642
definitionDH883544|Mus musculus domesticus DNA, BAC clone: B6Ng01-063H08, 5' end.DH883545|Mus musculus domesticus DNA, BAC clone: B6Ng01-063H08, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,442 - 18,835,968)(89,705,255 - 89,705,896)
sequence
gaattctttgttcagttctgagccccattttttaatggggttgtttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ctttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttctttga
tccatttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccatttgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttaccacaattgc
tctgtagtaaagctttaggtccggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctctttctaattcattgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatattgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagacttgaagttttatcatac
agatctttcacttccttagttagagtcacgccgagatattt
gaattcctgtccccatctgctgccattcacaggggtggcctctggttgat
gaactaaggccacaacacggctgatgtaaccatgattgtcaatgttcatc
tctttggtatcacccagcctgttcgctgctgggtctgcacagaataccct
cctctgcttcctgcagtcctttatcctatgctctgtgtcacatctgggtc
ttgggaagttttccagttgcatctaaaccgtactgaacatcaaggaaacc
cgaaggtctctcagcctacatgcatctcattctcttaaaaaaaatcagtc
agggtccaatgcagggaccctctctcgaatgtcacacactcactcgagac
cactctctgccactcgtgtctgtggactgataagtctggcatagacctca
tttcatcccaggcacaagcagagcccttgaactggccacttcttcccaca
atgctcgacatagcttatgaggactcttctagtccaagaaatagaaaacc
atgatttctacacctcttatatggaatctgttctcaacaagcacaagtcc
ttttgtttctcttgctattgatgttttagaaactcaaaagccaaaggaaa
gggaagagaaggaaaggcatgggaagggaaggggggagggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835442_18835968
seq2: B6Ng01-063H08.b_45_572 (reverse)

seq1  CCAGAGATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50

seq1  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  100
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAAATGGTGCTGGC  100

seq1  ACAACTGGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCT  150
      |||||||||||||||| |||||||||||| ||||||||||||||||||||
seq2  ACAACTGGTTGTTATCATGTAGAAGAATGCGAATCGATCCATACTTATCT  150

seq1  CCATGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  200
      || |||||||||||||||||||| |||||||| |||||||||||||||||
seq2  CCTTGTACTAAGGTCAAATCTAAATGGATCAAAGAACTTCACATAAAACC  200

seq1  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250

seq1  TGGGCAGAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTG  299
      |||||| ||||||||| ||||||||||||||||||||||| |||||||| 
seq2  TGGGCACAGGGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTA  300

seq1  AGGTAGAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  349
      || | |||||| ||||||||||||||||||||||||||||||||||||||
seq2  AGATCGAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  350

seq1  GGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAA  399
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GGCAAAAGACACCGTCAATAAGACAAAGAGACCACCAACAGATTGGGAAA  400

seq1  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  450

seq1  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAA  499
      ||||||||||||||||||||||||||||||||||| ||||||||||| ||
seq2  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAACAACCCCATTAAAAA  500

seq1  ATGGGGCTCAGAACTGAACAAAGAATTC  527
      ||||||||||||||||||||||||||||
seq2  ATGGGGCTCAGAACTGAACAAAGAATTC  528

seq1: chr11_89705255_89705896
seq2: B6Ng01-063H08.g_66_707

seq1  GAATTCCTGTCCCCATCTGCTGCCATTCACAGGGGTGGCCTCTGGTTGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTCCCCATCTGCTGCCATTCACAGGGGTGGCCTCTGGTTGAT  50

seq1  GAACTAAGGCCACAACACGGCTGATGTAACCATGATTGTCAATGTTCATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTAAGGCCACAACACGGCTGATGTAACCATGATTGTCAATGTTCATC  100

seq1  TCTTTGGTATCACCCAGCCTGTTCGCTGCTGGGTCTGCACAGAATACCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGGTATCACCCAGCCTGTTCGCTGCTGGGTCTGCACAGAATACCCT  150

seq1  CCTCTGCTTCCTGCAGTCCTTTATCCTATGCTCTGTGTCACATCTGGGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGCTTCCTGCAGTCCTTTATCCTATGCTCTGTGTCACATCTGGGTC  200

seq1  TTGGGAAGTTTTCCAGTTGCATCTAAACCGTACTGAACATCAAGGAAACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGAAGTTTTCCAGTTGCATCTAAACCGTACTGAACATCAAGGAAACC  250

seq1  CGAAGGTCTCTCAGCCTACATGCATCTCATTCTCTTAAAAAAAATCAGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAGGTCTCTCAGCCTACATGCATCTCATTCTCTTAAAAAAAATCAGTC  300

seq1  AGGGTCCAATGCAGGGACCCTCTCTCGAATGTCACACACTCACTCGAGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTCCAATGCAGGGACCCTCTCTCGAATGTCACACACTCACTCGAGAC  350

seq1  CACTCTCTGCCACTCGTGTCTGTGGACTGATAAGTCTGGCATAGACCTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTCTGCCACTCGTGTCTGTGGACTGATAAGTCTGGCATAGACCTCA  400

seq1  TTTCATCCCAGGCACAAGCAGAGCCCTTGAACTGGCCACTTCTTCCCACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATCCCAGGCACAAGCAGAGCCCTTGAACTGGCCACTTCTTCCCACA  450

seq1  ATGCTCGACATAGCTTATGAGGACTCTTCTAGTCCAAGAAATAGAAAACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTCGACATAGCTTATGAGGACTCTTCTAGTCCAAGAAATAGAAAACC  500

seq1  ATGATTTCTACACCTCTTATATGGAATCTGTTCTCAACAAGCACAAGTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTTCTACACCTCTTATATGGAATCTGTTCTCAACAAGCACAAGTCC  550

seq1  TTTTGTTTCTCTTGCTATTGATGTTTTAGAAACTCAAAAGCCAAAGGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTCTCTTGCTATTGATGTTTTAGAAACTCAAAAGCCAAAGGAAA  600

seq1  GGGAAGAGAAGGAAAGGCATGGGAAGGGAAGGGGGGAGGGGA  642
      ||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGAGAAGGAAAGGCATGGGAAGGGAAGGGGGGAGGGGA  642