BAC Information

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BAC

Clone NameB6Ng01-064E17
Chromosome6 (Build37)
Map Location 91,949,119 - 92,044,268
singlet/doubletdoublet
Overlap geneFgd5
Upstream geneNup210, Hdac11, Fbln2, LOC665716, Wnt7a, LOC100043659, LOC625420, Chchd4, Tmem43, Xpc, Lsm3, Slc6a6, Grip2, C130022K22Rik, 4930590J08Rik
Downstream geneNr2c2, Mrps25, Zfyve20, Trh, LOC665805, Prickle2, LOC545866, A730049H05Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-064E17.bB6Ng01-064E17.g
ACCDH884123DH884124
length1,069827
definitionDH884123|Mus musculus domesticus DNA, BAC clone: B6Ng01-064E17, 5' end.DH884124|Mus musculus domesticus DNA, BAC clone: B6Ng01-064E17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(92,043,170 - 92,044,268)(91,949,119 - 91,949,943)
sequence
gaattctcattatgtagccctggctggcctagaactcttgtgtgtgataa
agtcttgtgccaaccaccatacttggatggtctcttaaaagtttgattga
ctacagactgacaaggatttcgatacaaaataactggagaaaactgcagc
ttcagattgatagctgtgtctccaattagaacgcccttttgtggttgaac
agccttgaacctgtgattaggctattcttgctgttatcagaaactaaagg
tatcagggcactttctcacccatgtgcctgaaagaagggtctgcatcctt
aaaagatctgatatcattacaatatcaactgtattgtgattttaaaattt
ccagcttttggaaagagaaaacccaaaaggaagagccatcatgctttggg
agtgggaaagggggttgtcactttatttcatgaagattctatcacctcat
aaatattcaggaaaactttaaaatccacagtgtagaactcactgggctgc
aagtcactttgggacagcttattccaatctctttttggaaatgtttgctt
ggcttaacttacactgtctcttgagatatccaaagaaagaattaaaactg
agactgctcatattattaaaaaggtattgtttgatttcaaatattttatt
tttggataccggatcttatagcccaggctggcctaaaactctatgtagcc
aagaatgacactgaaacttctgatctgcctccaccgccccagtaactggg
attacagatatgcagcactacataagtttatgcagtgctaaagatgaaac
ttgatttcctacatgctagccagcccttcctactatgttatatgcacaaa
tatttagttcatcagactttcccatgggagctaaattaaattttgtaagt
ttgtttccactttgaaaatgaaatttcagtagcttcatagcatcatcatt
aatcttaggaaagatatatgtaaaagatgcctccgaagtccatcaatccc
tgctagtatattgacattttatgctgcagtcttccaactgtcagtccggt
aatgaccaattaaatatgc
gaattccgccctgaggtactgtttggagtcagtattaatacacgagaaac
tgaggcatgaaatggttaaagcaaagcagccaaggtcagttagttgatca
atagcagggccaggatgttcccctgcactttccagctacgcagcaaggat
cctactcactctctatcacccattcaatttgcagaatgtcctgttaagga
gatcagaggaagaaaccgaataggttctgaatagcagggggatttgtaag
ggggtatgtgtctaggtttgggttctgtcctctctctggtttaccccctt
tgcaagcttgccaactggaactggcatccactcgcttgagctgcagatgc
tgcaggggagtgcaagtattcagaatgtcatcagtgttcggaataagaca
gcttataatgacagcactcaatttttcctgcctgaggccaaagctaaggc
tcagttgcaagcgctttcctggcatgtgcgaggccctgagttcaagtccc
agcatcaccatcagccccaaaatccaaatacagagagggaaacactcacc
gtcccaggggttaaaggcacaggctgtatgctcagagtgcctggccatgc
ttaggaaaagccttggatagcctattccccatcccctttgctgtggtgag
gcaggaatcatggggccttgtgcaaggtgggacaaagctgctgttagctg
tattagagaacaaaaagaccatggctcctctggtgttctcaaggaagacc
acgtctttccccgaggaaccaaggctttagaaggatgctgtggccccggg
gtcccaagctccattgtcagctgctgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_92043170_92044268
seq2: B6Ng01-064E17.b_50_1118 (reverse)

seq1  GCATATTTAATTGGTGCATTTTTACCCGAACTTGACAGTTGGGATAGCAT  50
      ||||||||||||||| ||   ||||| ||   ||||||||||   ||  |
seq2  GCATATTTAATTGGT-CA---TTACCGGA--CTGACAGTTGG--AAGACT  42

seq1  GCCCAGCAATAAAATGTCCATTATACTAAGCAGGGAATTTGAATTGGACT  100
      |  |||| ||||||||| || |||||| ||||||||  ||||  ||||||
seq2  G--CAGC-ATAAAATGT-CAATATACT-AGCAGGGA--TTGA--TGGACT  83

seq1  TCAGTAGGCATTCTTTTAACATATTTATCTTTCCCAGAGATAAAATTGAT  150
      || | ||||| |||||| |||||  ||||||||| | |||| ||  ||| 
seq2  TC-GGAGGCA-TCTTTT-ACATA--TATCTTTCCTA-AGATTAA--TGA-  124

seq1  TGATGCTATGAAGCTACTGAAAATCTCATTTATCAAAGTGGAAAACAAAC  200
      ||||||||||||||||||| |||| |||||| ||||||||| ||||||||
seq2  TGATGCTATGAAGCTACTG-AAATTTCATTT-TCAAAGTGG-AAACAAAC  171

seq1  TTTACAAAATATAATGTTAGCTTCCATTGGAAAGTCTGATGACTAAAATA  250
       ||||||||| |||| |||||| |||| ||||||||||||||   |||||
seq2  -TTACAAAATTTAAT-TTAGCTCCCATGGGAAAGTCTGATGAACTAAATA  219

seq1  TTTGTGCATATAACATAGTAGGAAGGGCTGGCTAGCATGTAGGAAATCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGCATATAACATAGTAGGAAGGGCTGGCTAGCATGTAGGAAATCAA  269

seq1  GTTTCATCCTTAGCACTGCATAAACTTATGTAGTGCTGCATATCTGTAAT  350
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCATCTTTAGCACTGCATAAACTTATGTAGTGCTGCATATCTGTAAT  319

seq1  CCCAGTTACTGGGGCGGTGGAGGCAGATCAGAAGTTTCAGTGTCATTCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTTACTGGGGCGGTGGAGGCAGATCAGAAGTTTCAGTGTCATTCTT  369

seq1  GGCTACATAGAGTTTTAGGCCAGCCTGGGCTATAAGATCCGGTATCC-AA  449
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GGCTACATAGAGTTTTAGGCCAGCCTGGGCTATAAGATCCGGTATCCAAA  419

seq1  AATAAAATATTTGAAATCAAACAATACCTTTTTAATAATATGAGCAGTCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAATATTTGAAATCAAACAATACCTTTTTAATAATATGAGCAGTCT  469

seq1  CAGTTTTAATTCTTTCTTTGGATATCTCAAGAGACAGTGTAAGTTAAGCC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTTAATTCTTTCTTTGGATATCTCAAGAGACAGTGTAAGTTAAGCC  519

seq1  AAGCAAACATTTCCAAAAAGAGATTGGAATAAGCTGTCCCAAAGTGACTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAACATTTCCAAAAAGAGATTGGAATAAGCTGTCCCAAAGTGACTT  569

seq1  GCAGCCCAGTGAGTTCTACACTGTGGATTTTAAAGTTTTCCTGAATATTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCCCAGTGAGTTCTACACTGTGGATTTTAAAGTTTTCCTGAATATTT  619

seq1  ATGAGGTGATAGAATCTTCATGAAATAAAGTGACAACCCCCTTTCCCACT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGTGATAGAATCTTCATGAAATAAAGTGACAACCCCCTTTCCCACT  669

seq1  CCCAAAGCATGATGGCTCTTCCTTTTGGGTTTTCTCTTTCCAAAAGCTGG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAAGCATGATGGCTCTTCCTTTTGGGTTTTCTCTTTCCAAAAGCTGG  719

seq1  AAATTTTAAAATCACAATACAGTTGATATTGTAATGATATCAGATCTTTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTAAAATCACAATACAGTTGATATTGTAATGATATCAGATCTTTT  769

seq1  AAGGATGCAGACCCTTCTTTCAGGCACATGGGTGAGAAAGTGCCCTGATA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATGCAGACCCTTCTTTCAGGCACATGGGTGAGAAAGTGCCCTGATA  819

seq1  CCTTTAGTTTCTGATAACAGCAAGAATAGCCTAATCACAGGTTCAAGGCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAGTTTCTGATAACAGCAAGAATAGCCTAATCACAGGTTCAAGGCT  869

seq1  GTTCAACCACAAAAGGGCGTTCTAATTGGAGACACAGCTATCAATCTGAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAACCACAAAAGGGCGTTCTAATTGGAGACACAGCTATCAATCTGAA  919

seq1  GCTGCAGTTTTCTCCAGTTATTTTGTATCGAAATCCTTGTCAGTCTGTAG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCAGTTTTCTCCAGTTATTTTGTATCGAAATCCTTGTCAGTCTGTAG  969

seq1  TCAATCAAACTTTTAAGAGACCATCCAAGTATGGTGGTTGGCACAAGACT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATCAAACTTTTAAGAGACCATCCAAGTATGGTGGTTGGCACAAGACT  1019

seq1  TTATCACACACAAGAGTTCTAGGCCAGCCAGGGCTACATAATGAGAATTC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCACACACAAGAGTTCTAGGCCAGCCAGGGCTACATAATGAGAATTC  1069

seq1: chr6_91949119_91949943
seq2: B6Ng01-064E17.g_70_896

seq1  GAATTCCGCCCTGAGGTACTGTTTGGAGTCAGTATTAATACACGAGAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCGCCCTGAGGTACTGTTTGGAGTCAGTATTAATACACGAGAAAC  50

seq1  TGAGGCATGAAATGGTTAAAGCAAAGCAGCCAAGGTCAGTTAGTTGATCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCATGAAATGGTTAAAGCAAAGCAGCCAAGGTCAGTTAGTTGATCA  100

seq1  ATAGCAGGGCCAGGATGTTCCCCTGCACTTTCCAGCTACGCAGCAAGGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCAGGGCCAGGATGTTCCCCTGCACTTTCCAGCTACGCAGCAAGGAT  150

seq1  CCTACTCACTCTCTATCACCCATTCAATTTGCAGAATGTCCTGTTAAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACTCACTCTCTATCACCCATTCAATTTGCAGAATGTCCTGTTAAGGA  200

seq1  GATCAGAGGAAGAAACCGAATAGGTTCTGAATAGCAGGGGGATTTGTAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAGAGGAAGAAACCGAATAGGTTCTGAATAGCAGGGGGATTTGTAAG  250

seq1  GGGGTATGTGTCTAGGTTTGGGTTCTGTCCTCTCTCTGGTTTACCCCCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTATGTGTCTAGGTTTGGGTTCTGTCCTCTCTCTGGTTTACCCCCTT  300

seq1  TGCAAGCTTGCCAACTGGAACTGGCATCCACTCGCTTGAGCTGCAGATGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAGCTTGCCAACTGGAACTGGCATCCACTCGCTTGAGCTGCAGATGC  350

seq1  TGCAGGGGAGTGCAAGTATTCAGAATGTCATCAGTGTTCGGAATAAGACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGGGAGTGCAAGTATTCAGAATGTCATCAGTGTTCGGAATAAGACA  400

seq1  GCTTATAATGACAGCACTCAATTTTTCCTGCCTGAGGCCAAAGCTAAGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTATAATGACAGCACTCAATTTTTCCTGCCTGAGGCCAAAGCTAAGGC  450

seq1  TCAGTTGCAAGCGCTTTCCTGGCATGTGCGAGGCCCTGAGTTCAAGTCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTGCAAGCGCTTTCCTGGCATGTGCGAGGCCCTGAGTTCAAGTCCC  500

seq1  AGCATCACCATCAGCCCCAAAATCCAAATACAGAGAGGGAAACACTCACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCACCATCAGCCCCAAAATCCAAATACAGAGAGGGAAACACTCACC  550

seq1  GTCCCA-GGGTTAAAGGCACAGGCTGTATGCTCAGAGTGCCTGGCCATGC  599
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCAGGGGTTAAAGGCACAGGCTGTATGCTCAGAGTGCCTGGCCATGC  600

seq1  TTAGGAAAAGCCTTGGATAGCCTATTCCCCATCCCCTTTGCTGTGGTGAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGAAAAGCCTTGGATAGCCTATTCCCCATCCCCTTTGCTGTGGTGAG  650

seq1  GCAGGAATCAT-GGGCCTTGTGCAAGGTGGGACAAAGCTGCTGTTAGCTG  698
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GCAGGAATCATGGGGCCTTGTGCAAGGTGGGACAAAGCTGCTGTTAGCTG  700

seq1  TAGTTAGAGAAC-AAAAGACCATGGCTCCTCT-GTGTTCTCAAGGAAGAA  746
      || ||||||||| ||||||||||||||||||| |||||||||||||||| 
seq2  TA-TTAGAGAACAAAAAGACCATGGCTCCTCTGGTGTTCTCAAGGAAGAC  749

seq1  CACGTTCTTTCCCCGAGGAACCAAGGTCTTTGAAGGATGCTGGTGGCCCC  796
      |||| |||||||||||||||||||||  || |||||||||| ||||||||
seq2  CACG-TCTTTCCCCGAGGAACCAAGGCTTTAGAAGGATGCT-GTGGCCCC  797

seq1  GGGGTCCCAAGCGCCA-TGTCAGCTGCTGC  825
      |||||||||||| ||| |||||||||||||
seq2  GGGGTCCCAAGCTCCATTGTCAGCTGCTGC  827