BAC Information

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BAC

Clone NameB6Ng01-065C10
Chromosome6 (Build37)
Map Location 86,629,462 - 86,727,090
singlet/doubletdoublet
Overlap gene2610209M04Rik, Gmcl1, Anxa4
Upstream geneAlms1, LOC100043497, EG665134, LOC100043493, Cml3, LOC623273, Cml5, Cml4, LOC100043504, LOC100043508, Cml2, LOC665177, 1700019G17Rik, Cml1, Tprkb, EG434057, LOC665213, Dusp11, Figla, Add2, Tgfa, LOC665233, LOC100043094, LOC100043527, 2010309E21Rik, Snrpg, Pcyox1, Tia1, C87436, 2310040G24Rik, Pcbp1, Asprv1, Mxd1
Downstream gene2610306M01Rik, Aak1, LOC100043555, Nfu1, Gfpt1, D6Ertd527e, Antxr1, Gkn1, Gkn2, 1190003M12Rik, Bmp10, Arhgap25, Prokr1, 2010301N04Rik, 1810020O05Rik, AB041550, LOC100043118, EG545864
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-065C10.bB6Ng01-065C10.g
ACCDH884711DH884712
length6931,088
definitionDH884711|Mus musculus domesticus DNA, BAC clone: B6Ng01-065C10, 5' end.DH884712|Mus musculus domesticus DNA, BAC clone: B6Ng01-065C10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(86,629,462 - 86,630,154)(86,725,996 - 86,727,090)
sequence
gaattccaactctcacatcagagatactaactcacctacgtctactgcta
tggtactcaccacaggcaggaaacagaaccagcccagatgtccattaaca
gacagatggataaagacaatctgataaatatacacaatggaattttatac
agccatgaaaaataaaatcaaggaggcagtggtagcacacacctataatc
ccagcactcagtaagcagaggcaggtggatctctgtgagtttgaggctag
ccagatctactcaggtagttccaagacaaggacagccaaggctacccaaa
gaaatcctgccttgaaagacctaaaccaaaccaaaccaaaccaaaataag
aaacaaacaaaaaaccccaatccgaaccaaacagaaaaatccaaaatcaa
caaacaaaccccaaatcatctacaagaaaatgaatggaacttgaaattat
tatactaaatgaagtaaccagattaaaaaaaatatgttttctcatgtgca
aatcctaaattttaatttttttatgtatgcagatacacatacatatgttg
gggagtagattggtcatgaaactagaaaggggattataaaagagggagag
atctttgggaagaatgggaaaaagaagtccgcagaacacaagtgatggaa
agtcaaatgggactaatatggggaggaggagatgggaaggcgg
gaattccaggacacccagggctgcacagtgagaccatgtctcaaaaagac
agcaaatatttatttacttctatttcatgtgtatggatgtttttgccagc
atgtacgtgtgtgtaccaagtgtatgcagtggccacagagaacagaagaa
ggtgttggatccctcagaactggagttacagatggttgtgagccaccatg
tggatgctgggaatagaacacgttctggtcctttacaggaacaagtgctc
ttaagtgctgagccgtctctccagccttgtattcctgtctcccttgtgtg
cagtatgcgtggcagtttgatctgaaataaggaaaccccattagttctaa
ctgaaccacacaagagttgtgttttaagcctggagggcacagccatgata
gtataaagcaaagtctgggcttgaaaatttgtattatttccttgtctgcc
ctgtcaaaggctttgcgtgaaagcgcctggtgcttcctgcccatagcaga
atccagaagagctatttctggtgctcctgctggtgtctgcctgatattct
tcaaactacagacatggggcaaacagccagtggaatcactgcgtctaacc
ccacagtctctggagtcagactaaccaagggcatcattctcctgtgtgtg
tgtgcgtgtgtgagagaaagagagacagagacagagagagaagctcaaat
tttgttatgtaacacagatgtatctaactttctatcctgcataggtctcc
taaatactatggttattcctgtgactatgggtgtggctactgtgtccagc
acttgcaaattatggttgctcagccctgacctctccgcttgcatgtgcag
gatgccaggccctgttctgttctaagttggcacagaatgtgcctgttggg
attctgtggcctcatctggcaaaggcatgctgccaaccatgagtcagctc
caaggggcattatccaaagactggatggctgagcttgaacagggctgtgg
cagttagaagtgtgcttctggtttgcaccgcacctcttcttgctttcgac
tgcaacaatctttgcagatataaggtgctccagtctcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_86629462_86630154
seq2: B6Ng01-065C10.b_49_741

seq1  GAATTCCAACTCTCACATCAGAGATACTAACTCACCTACGTCTACTGCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAACTCTCACATCAGAGATACTAACTCACCTACGTCTACTGCTA  50

seq1  TGGTACTCACCACAGGCAGGAAACAGAACCAGCCCAGATGTCCATTAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTACTCACCACAGGCAGGAAACAGAACCAGCCCAGATGTCCATTAACA  100

seq1  GACAGATGGATAAAGACAATCTGATAAATATACACAATGGAATTTTATAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGATGGATAAAGACAATCTGATAAATATACACAATGGAATTTTATAC  150

seq1  AGCCATGAAAAATAAAATCAAGGAGGCAGTGGTAGCACACACCTATAATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATGAAAAATAAAATCAAGGAGGCAGTGGTAGCACACACCTATAATC  200

seq1  CCAGCACTCAGTAAGCAGAGGCAGGTGGATCTCTGTGAGTTTGAGGCTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCACTCAGTAAGCAGAGGCAGGTGGATCTCTGTGAGTTTGAGGCTAG  250

seq1  CCAGATCTACTCAGGTAGTTCCAAGACAAGGACAGCCAAGGCTACCCAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATCTACTCAGGTAGTTCCAAGACAAGGACAGCCAAGGCTACCCAAA  300

seq1  GAAATCCTGCCTTGAAAGACCTAAACCAAACCAAACCAAACCAAAATAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCCTGCCTTGAAAGACCTAAACCAAACCAAACCAAACCAAAATAAG  350

seq1  AAACAAACAAAAAACCCCAATCCGAACCAAACAGAAAAATCCAAAATCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAACAAAAAACCCCAATCCGAACCAAACAGAAAAATCCAAAATCAA  400

seq1  CAAACAAACCCCAAATCATCTACAAGAAAATGAATGGAACTTGAAATTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAAACCCCAAATCATCTACAAGAAAATGAATGGAACTTGAAATTAT  450

seq1  TATACTAAATGAAGTAACCAGATTAAAAAAAATATGTTTTCTCATGTGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTAAATGAAGTAACCAGATTAAAAAAAATATGTTTTCTCATGTGCA  500

seq1  AATCCTAAATTTTAATTTTTTTATGTATGCAGATACACATACATATGTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTAAATTTTAATTTTTTTATGTATGCAGATACACATACATATGTTG  550

seq1  GGGAGTAGATTGGTCATGAAACTAGAAAGGGGATTATAAAAGAGGGAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGTAGATTGGTCATGAAACTAGAAAGGGGATTATAAAAGAGGGAGAG  600

seq1  ATCTTTGGGAAGAATGGGAAAAAGAAGTCCGCAGAACACAAGTGATGGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTGGGAAGAATGGGAAAAAGAAGTCCGCAGAACACAAGTGATGGAA  650

seq1  AGTCAAATGGGACTAATATGGGGAGGAGGAGATGGGAAGGCGG  693
      |||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAAATGGGACTAATATGGGGAGGAGGAGATGGGAAGGCGG  693

seq1: chr6_86725996_86727090
seq2: B6Ng01-065C10.g_69_1156 (reverse)

seq1  CGAGACTGGAGCACACTTA-ATCTGGCAAAAGACTGGCTGCCAGTCGACA  49
      |||||||||||||| |||| |||||   ||||| ||  |  ||||||| |
seq2  CGAGACTGGAGCAC-CTTATATCTG--CAAAGATTG--TTGCAGTCGAAA  45

seq1  GC-AGAAGATGGTGCCGTGCAAACCCAGAAGCACACTTCTAACTGCCACA  98
      || |||||| ||||| ||||||| ||||||||||||||||||||||||||
seq2  GCAAGAAGA-GGTGCGGTGCAAA-CCAGAAGCACACTTCTAACTGCCACA  93

seq1  GCCCTGTCCAAGCTCAGCCATCCAGTCTTTGGATAATGCCCCTTGGAGCT  148
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGTTCAAGCTCAGCCATCCAGTCTTTGGATAATGCCCCTTGGAGCT  143

seq1  GACTCATGGTTGGCAGCATGCCTTTGCCAGATGAGGCCACAGAATCCCAA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCATGGTTGGCAGCATGCCTTTGCCAGATGAGGCCACAGAATCCCAA  193

seq1  CAGGCACATTCTGTGCCCACCTTAGAACAGAACAGGGCCTGGCATCCTGC  248
      ||||||||||||||| ||| ||||||||||||||||||||||||||||||
seq2  CAGGCACATTCTGTG-CCAACTTAGAACAGAACAGGGCCTGGCATCCTGC  242

seq1  ACATGCAAGCGGAGAGGTCAGGGCTGAGCCAACCATAATTTGCAAGTGCT  298
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  ACATGCAAGCGGAGAGGTCAGGGCTGAG-CAACCATAATTTGCAAGTGCT  291

seq1  GGACACAGTAGCCACACCCATAGTCACAGGAATAACCATAGTATTTAGGA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACAGTAGCCACACCCATAGTCACAGGAATAACCATAGTATTTAGGA  341

seq1  GACCTATGCAGGATAGAAAGTTAGATACATCTGTGTTACATAACAAAATT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTATGCAGGATAGAAAGTTAGATACATCTGTGTTACATAACAAAATT  391

seq1  TGAGCTTCTCTCTCTGTCTCTGTCTCTCTTTCTCTCACACACGCACACAC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTTCTCTCTCTGTCTCTGTCTCTCTTTCTCTCACACACGCACACAC  441

seq1  ACACAGGAGAATGATGCCCTTGGTTAGTCTGACTCCAGAGACTGTGGGGT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGGAGAATGATGCCCTTGGTTAGTCTGACTCCAGAGACTGTGGGGT  491

seq1  TAGACGCAGTGATTCCACTGGCTGTTTGCCCCATGTCTGTAGTTTGAAGA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACGCAGTGATTCCACTGGCTGTTTGCCCCATGTCTGTAGTTTGAAGA  541

seq1  ATATCAGGCAGACACCAGCAGGAGCACCAGAAATAGCTCTTCTGGATTCT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCAGGCAGACACCAGCAGGAGCACCAGAAATAGCTCTTCTGGATTCT  591

seq1  GCTATGGGCAGGAAGCACCAGGCGCTTTCACGCAAAGCCTTTGACAGGGC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATGGGCAGGAAGCACCAGGCGCTTTCACGCAAAGCCTTTGACAGGGC  641

seq1  AGACAAGGAAATAATACAAATTTTCAAGCCCAGACTTTGCTTTATACTAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAGGAAATAATACAAATTTTCAAGCCCAGACTTTGCTTTATACTAT  691

seq1  CATGGCTGTGCCCTCCAGGCTTAAAACACAACTCTTGTGTGGTTCAGTTA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGCTGTGCCCTCCAGGCTTAAAACACAACTCTTGTGTGGTTCAGTTA  741

seq1  GAACTAATGGGGTTTCCTTATTTCAGATCAAACTGCCACGCATACTGCAC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTAATGGGGTTTCCTTATTTCAGATCAAACTGCCACGCATACTGCAC  791

seq1  ACAAGGGAGACAGGAATACAAGGCTGGAGAGACGGCTCAGCACTTAAGAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGGAGACAGGAATACAAGGCTGGAGAGACGGCTCAGCACTTAAGAG  841

seq1  CACTTGTTCCTGTAAAGGACCAGAACGTGTTCTATTCCCAGCATCCACAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGTTCCTGTAAAGGACCAGAACGTGTTCTATTCCCAGCATCCACAT  891

seq1  GGTGGCTCACAACCATCTGTAACTCCAGTTCTGAGGGATCCAACACCTTC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCTCACAACCATCTGTAACTCCAGTTCTGAGGGATCCAACACCTTC  941

seq1  TTCTGTTCTCTGTGGCCACTGCATACACTTGGTACACACACGTACATGCT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTCTCTGTGGCCACTGCATACACTTGGTACACACACGTACATGCT  991

seq1  GGCAAAAACATCCATACACATGAAATAGAAGTAAATAAATATTTGCTGTC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAAAACATCCATACACATGAAATAGAAGTAAATAAATATTTGCTGTC  1041

seq1  TTTTTGAGACATGGTCTCACTGTGCAGCCCTGGGTGTCCTGGAATTC  1095
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGAGACATGGTCTCACTGTGCAGCCCTGGGTGTCCTGGAATTC  1088