BAC Information

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BAC

Clone NameB6Ng01-065P02
Chromosome6 (Build37)
Map Location 104,091,091 - 104,092,176
singlet/doubletsinglet
Overlap genenone
Upstream geneChl1, LOC666141, LOC100043345
Downstream geneCntn6, LOC384470
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-065P02.b
ACCDH885270
length1,077
definitionDH885270|Mus musculus domesticus DNA, BAC clone: B6Ng01-065P02, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctggtagtaaaaactgtgaagggtttctgtatactaaagattgct
gaacctgcattaacagataatggcttctacatctgattaaaaaggaggtt
cttattaggctaataaaaatccttttggctatattcacagtagaactttg
ttgcgatactatggacacaagataagtaaagaaatgaagatgaagaaatt
aagatatcagaattttagaatgctgttaaaatcattattgcaaatccaaa
atttatagcagaaattgggcttgagagagtgatattttcctatttctcag
aatgtagaagagggagctcaagtggtttctgtttgctagaacaggggagg
gaggtagatgatgctgtctggtaacataaactccagaaccgagcatatct
agaaagcaaagaagaaacatggctttaaataaaatacctttcttcagagc
aaggaatatctcttttattttactgtgctgtagaaagataccctgataaa
aaccaactttggagaaagggtttattttgccataccacatcagatagatt
ctctgatagggatggctggatagcaggaacaaagagctagctgatcatgt
ggtatctgcacaaagataacagagagaaaacagcaaggggcaccagccta
ttcaaactcaaagaccacactccagtgattacttctcctgcaggtttcta
ccttctaaatgcttcccaaatgtaccatcaagtgaaaataaggattcaaa
tgtatgcatctattggtatgcttttatgttctaatcacaatagactcatt
atattgttatgaccagagataataagataggagaaaatcagttccagctt
ttaaaagggccatagaagaagttatcatcattagaaagagcaaagaatcc
atgctgatcaaattttaatggatagattcaattaaagtaaaaaaatatgg
gttaattactaggaccataaaatctacatggtgcagtgaaagaacagctt
taagagcagtgagaattgactgctgggtaagcaagcttccgaagacatat
gggaaaagctcagaagttaagttttct
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_104091091_104092176
seq2: B6Ng01-065P02.b_49_1125

seq1  GAATTCTGGTAGTAAAAACTGTGAAGGGTTTCTGTATACTAAAGATTGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGTAGTAAAAACTGTGAAGGGTTTCTGTATACTAAAGATTGCT  50

seq1  GAACCTGCATTAACAGATAATGGCTTCTACATCTGATTAAAAAGGAGGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCTGCATTAACAGATAATGGCTTCTACATCTGATTAAAAAGGAGGTT  100

seq1  CTTATTAGGCTAATAAAAATCCTTTTGGCTATATTCACAGTAGAACTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTAGGCTAATAAAAATCCTTTTGGCTATATTCACAGTAGAACTTTG  150

seq1  TTGCGATACTATGGACACAAGATAAGTAAAGAAATGAAGATGAAGAAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCGATACTATGGACACAAGATAAGTAAAGAAATGAAGATGAAGAAATT  200

seq1  AAGATATCAGAATTTTAGAATGCTGTTAAAATCATTATTGCAAATCCAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATATCAGAATTTTAGAATGCTGTTAAAATCATTATTGCAAATCCAAA  250

seq1  ATTTATAGCAGAAATTGGGCTTGAGAGAGTGATATTTTCCTATTTCTCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATAGCAGAAATTGGGCTTGAGAGAGTGATATTTTCCTATTTCTCAG  300

seq1  AATGTAGAAGAGGGAGCTCAAGTGGTTTCTGTTTGCTAGAACAGGGGAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAGAAGAGGGAGCTCAAGTGGTTTCTGTTTGCTAGAACAGGGGAGG  350

seq1  GAGGTAGATGATGCTGTCTGGTAACATAAACTCCAGAACCGAGCATATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTAGATGATGCTGTCTGGTAACATAAACTCCAGAACCGAGCATATCT  400

seq1  AGAAAGCAAAGAAGAAACATGGCTTTAAATAAAATACCTTTCTTCAGAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGCAAAGAAGAAACATGGCTTTAAATAAAATACCTTTCTTCAGAGC  450

seq1  AAGGAATATCTCTTTTATTTTACTGTGCTGTAGAAAGATACCCTGATAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAATATCTCTTTTATTTTACTGTGCTGTAGAAAGATACCCTGATAAA  500

seq1  AACCAACTTTGGAGAAAGGGTTTATTTTGCCATACCACATCAGATAGATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAACTTTGGAGAAAGGGTTTATTTTGCCATACCACATCAGATAGATT  550

seq1  CTCTGATAGGGATGGCTGGATAGCAGGAACAAAGAGCTAGCTGATCATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGATAGGGATGGCTGGATAGCAGGAACAAAGAGCTAGCTGATCATGT  600

seq1  GGTATCTGCACAAAGATAACAGAGAGAAAACAGCAAGGGGCACCAGCCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATCTGCACAAAGATAACAGAGAGAAAACAGCAAGGGGCACCAGCCTA  650

seq1  TTCAAACTCAAAGACCACACTCCAGTGATTACTTCTCCTGCAGGTTTCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAACTCAAAGACCACACTCCAGTGATTACTTCTCCTGCAGGTTTCTA  700

seq1  CCTTCTAAATGCTTCCCAAATGTACCATCAAGTGAAAATAAGGATTCAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTAAATGCTTCCCAAATGTACCATCAAGTGAAAATAAGGATTCAAA  750

seq1  TGTATGCATCTATTGGTATGC-TTTATGTTCTAATCACAATAGACTCATT  799
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TGTATGCATCTATTGGTATGCTTTTATGTTCTAATCACAATAGACTCATT  800

seq1  ATATTGTTATGACCAGAGATAATAAGATAGGAGAAAATCAGTTCCAGCTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGTTATGACCAGAGATAATAAGATAGGAGAAAATCAGTTCCAGCTT  850

seq1  TAAAAAGGGCCATAGAAGAAGTTATCATCAATAGAAAGAGCAAAGAATCC  899
      | |||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TTAAAAGGGCCATAGAAGAAGTTATCATCATTAGAAAGAGCAAAGAATCC  900

seq1  AATGCTGATCAAATTTTAATGGAAAGATTCAAAATAAAAGTAAAAAAAAT  949
       |||||||||||||||||||||| ||||||  ||| ||||| ||||||||
seq2  -ATGCTGATCAAATTTTAATGGATAGATTC--AATTAAAGT-AAAAAAAT  946

seq1  ATGGGTTAATTTACTAGAACCATAAAATCTACATGGTGCAGTGAAAGAAC  999
      ||||||||| ||||||| ||||||||||||||||||||||||||||||||
seq2  ATGGGTTAA-TTACTAGGACCATAAAATCTACATGGTGCAGTGAAAGAAC  995

seq1  AGCTTTAAGAGCCAGTGAGAATGGACTGCTGGGTTAGGCAGGTCTTCAG-  1048
      ||||||||||| |||||||||| ||||||||||| ||  ||  |||| | 
seq2  AGCTTTAAGAG-CAGTGAGAATTGACTGCTGGGTAAGCAAG--CTTCCGA  1042

seq1  AGACATATGGGAAAAGGGCTCAGAAGTTAAAGTTTTCT  1086
      |||||||||||||||  ||||||||||| |||||||||
seq2  AGACATATGGGAAAA--GCTCAGAAGTT-AAGTTTTCT  1077