BAC Information

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BAC

Clone NameB6Ng01-066M22
Chromosome6 (Build37)
Map Location 13,583,154 - 13,584,345
singlet/doubletsinglet
Overlap geneB630005N14Rik
Upstream geneThsd7a, LOC667735, LOC384350, Tmem106b, Gm467, Gm725, 1700016P04Rik, LOC100040478, Tmem168
Downstream geneGpr85, 2610001J05Rik, LOC100041043, LOC100040513, LOC667797
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-066M22.bB6Ng01-066M22.g
ACCDH885881DH885882
length1,1701,210
definitionDH885881|Mus musculus domesticus DNA, BAC clone: B6Ng01-066M22, 5' end.DH885882|Mus musculus domesticus DNA, BAC clone: B6Ng01-066M22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaggacctcctgtgctggacaggtgtttaaccactgacttatgct
ctctattcttacaaagctttatacttgcaaactactatatatattattaa
gcaaccaaaaacaggaatataaaaatatatagttgaaaaattaagcataa
actaagatatctataactctacatatatttcttttcttttaaaaaatctt
aacacctgtttttcctgttgcttagcagagaacaacgaaaaagaagtaac
acttggcaaatactactgctctgaatgactagaaaaagttcatgctcatg
tgttctagttgctgagaccacttgatattcacttatgaaatttctgtttt
tcagacttagtagtctcttaaatactttctattatttttatgtctgcttc
tttcacacacacgcagagagagagagagagaaacagagagagagagaaac
agagacagggagagagagagaaagaaagagagagagagagagagagaaac
agagacagggagagagagacagagacagggagagagagagagagaaagaa
agagagatagagaagagagacagagagacagagagagatagttctgatgc
gtcacaatgtccattcacctatgttcctctgtccaccaaatccttttcct
tagtctcctttatacctgagttaggttgccgcactttgtattttataggt
atggttatcatagtgtgtatagttcaatctgagacccttctgaaaataaa
agaaatttagcaaatatacaagaagactatacaaaaataaaacatatgat
cattccaagtttaagcagagtagcaagtgaaattacagtaccattagtgg
ttaagtactcagccagctaaatgtcttaattgactttcagtcttagtagc
cgagtatgattattttttccactgcttttggttaggacatgcaccaccat
gttcagtatactctactataaaatatacttgtatgaattttcagaaaatc
agtgttagtggtatggcataatttgaatatttctaatagtactattgttt
atggtagttttccacatttcttatgacttaacatcaacctcttgagaaaa
tgaatgtattatccagatcaatgatttaaacaaatttaaaggcttagatg
ttctacgcacatctataaaa
gaattcagaacttttcagctggggaacgagagtaccagtgagtacagctt
tacgaggtaagcctgatcttgaactttctaacgaaattcaagacagtcta
tcagaagtaaagtggaatatgtttggccttgaattttttctggtgttagg
agcccttttgttccttttcacatgttatcaagtgattaagatagggctga
aaattctagaggaaattcaggacaagctatcagaagtaaagcggggagag
agagtaggagcaaagaggaaatatggtacacaaaataagtatacaggcct
ttccaagggtcttgaacccgaggaaaagttaaggttaggtaggaatacct
ggagagagattagaagaaaaagaggaaaaagggaaaagaagaaagatcaa
ttagcggaggtctctaggaaaaggagcctgtgctcatcgctggatgggct
cgggaagccagctcttagtagctctgaagcaggtgaagaatcctcctctg
aggaaacagactgggaggaagaagcagcccattaccagccagctaattgg
tcaagaaaaaagccaaaagcggctggcgaaggccagtttgctgattggcc
tcagggcagtcggcttcaaggtccgccctatgcggagtccccgccctgcg
tagtgcgtcagcaatgcgcagagaggcagtgcgcagagaggcagtgcgca
gactcattcattcccagagaggaacaaaggaaaatacaacaggcatttcc
ggtctttgaaggagccgagggtgggcgtgtccacgctccggtagaatact
tacaaattaaagaaattgccgagtcggtccgtaaatacggaaccaatgct
aattttaccttggtgcagttagacaggctcgccagcatggcactaactcc
tgctgactggcaaacggttgtaaaagccgctctccctagtatgggcaata
tatggaatggagagcgcttggcacgaagctgcacaagcgcagctcgagca
acgcagctgctttgactcagagcaggagatgactttgacttgttaacggg
tcaggagcttattctgctgatcagacaactaacatgggagctatgccagt
tctcccgggctattaggcctggaagccctctcgacagtgaacactggtca
gtacagtatcaggacctggaatctcgaatttggcaagaacgagcgacgaa
ccgatatttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_13583154_13584345
seq2: B6Ng01-066M22.b_45_1214

seq1  GAATTCAGGACCTCCTGTGCTGGACAGGTGTTTAACCACTGACTTATGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGACCTCCTGTGCTGGACAGGTGTTTAACCACTGACTTATGCT  50

seq1  CTCTATTCTTACAAAGCTTTATACTTGCAAACTACTATATATATTATTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATTCTTACAAAGCTTTATACTTGCAAACTACTATATATATTATTAA  100

seq1  GCAACCAAAAACAGGAATATAAAAATATATAGTTGAAAAATTAAGCATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACCAAAAACAGGAATATAAAAATATATAGTTGAAAAATTAAGCATAA  150

seq1  ACTAAGATATCTATAACTCTACATATATTTCTTTTCTTTTAAAAAATCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGATATCTATAACTCTACATATATTTCTTTTCTTTTAAAAAATCTT  200

seq1  AACACCTGTTTTTCCTGTTGCTTAGCAGAGAACAACGAAAAAGAAGTAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCTGTTTTTCCTGTTGCTTAGCAGAGAACAACGAAAAAGAAGTAAC  250

seq1  ACTTGGCAAATACTACTGCTCTGAATGACTAGAAAAAGTTCATGCTCATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGCAAATACTACTGCTCTGAATGACTAGAAAAAGTTCATGCTCATG  300

seq1  TGTTCTAGTTGCTGAGACCACTTGATATTCACTTATGAAATTTCTGTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTAGTTGCTGAGACCACTTGATATTCACTTATGAAATTTCTGTTTT  350

seq1  TCAGACTTAGTAGTCTCTTAAATACTTTCTATTATTTTTATGTCTGCTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGACTTAGTAGTCTCTTAAATACTTTCTATTATTTTTATGTCTGCTTC  400

seq1  TTTCACACACACGCAGAGAGAGAGAGAGAGAAACAGAGAGAGAGAGAAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACACACACGCAGAGAGAGAGAGAGAGAAACAGAGAGAGAGAGAAAC  450

seq1  AGAGACAGGGAGAGAGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACAGGGAGAGAGAGAGAAAGAAAGAGAGAGAGAGAGAGAGAGAAAC  500

seq1  AGAGACAGGGAGAGAGAGACAGAGACAGGGAGAGAGAGAGAGAGAAAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACAGGGAGAGAGAGACAGAGACAGGGAGAGAGAGAGAGAGAAAGAA  550

seq1  AGAGAGATAGAGAAGAGAGACAGAGAGACAGAGAGAGATAGTTCTGATGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGATAGAGAAGAGAGACAGAGAGACAGAGAGAGATAGTTCTGATGC  600

seq1  GTCACAATGTCCATTCACCTATGTTCCTCTGTCCACCAAATCCTTTTCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACAATGTCCATTCACCTATGTTCCTCTGTCCACCAAATCCTTTTCCT  650

seq1  TAGTCTCCTTTATACCTGAGTTAGGTTGCCGCACTTTGTATTTTATAGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTCCTTTATACCTGAGTTAGGTTGCCGCACTTTGTATTTTATAGGT  700

seq1  ATGGTTATCATAGTGTGTATAGTTCAATCTGAGACCCTTCTGAAAATAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTATCATAGTGTGTATAGTTCAATCTGAGACCCTTCTGAAAATAAA  750

seq1  AGAAATTTAGCAAATATACAAGAAGACTATACAAAAATAAAACATATGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATTTAGCAAATATACAAGAAGACTATACAAAAATAAAACATATGAT  800

seq1  CATTCCAAGTTTAAGCAGAGTAGCAAGTGAAATTACAGTACCATTAGTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCAAGTTTAAGCAGAGTAGCAAGTGAAATTACAGTACCATTAGTGG  850

seq1  TTAAGTACTCAGCCAGCTAAAATGTCTTAATTGACTTTCAGTCTTAGTAG  900
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TTAAGTACTCAGCCAGCT-AAATGTCTTAATTGACTTTCAGTCTTAGTAG  899

seq1  CCGAGTATGATTATTTTTTCCACTGCTTTTGGGTTAGGAACATGCAACCA  950
      |||||||||||||||||||||||||||||| ||||||| |||||||  | 
seq2  CCGAGTATGATTATTTTTTCCACTGCTTTT-GGTTAGG-ACATGCA--CC  945

seq1  ACCATGTTCAGTATACTCTACTATAAAATATACTTGTATGAATTTTCAGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGTTCAGTATACTCTACTATAAAATATACTTGTATGAATTTTCAGA  995

seq1  AAATCAGTGTTAGGTGTATGGCATAAATTTGAATATTCTAAATAGTACTA  1050
      |||||||||||||  ||||||||| ||||||||||||   ||||||||||
seq2  AAATCAGTGTTAGTGGTATGGCAT-AATTTGAATATTTCTAATAGTACTA  1044

seq1  TTGTTTATGGTAGTTTTCCAACAATTTTCTTATGACTTAACATCAACCCC  1100
      ||||||||||||||||||| |||  ||||||||||||||||||||||| |
seq2  TTGTTTATGGTAGTTTTCC-ACA--TTTCTTATGACTTAACATCAACCTC  1091

seq1  TTTGATGAAAAATGGATTGTATTTATCAAAATACAAATGATTTAAAAACA  1150
      |    ||| |||  || |||| ||||| | ||   ||||||||  |||||
seq2  T----TGAGAAAATGAATGTA-TTATCCAGAT--CAATGATTT--AAACA  1132

seq1  AATTTTAAAAAGCATAAGTATGTTCTACGACAATCTATAAAA  1192
      |||||  ||| || ||   ||||||||||   ||||||||||
seq2  AATTT--AAAGGCTTA--GATGTTCTACGCACATCTATAAAA  1170