BAC Information

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BAC

Clone NameB6Ng01-067H15
Chromosome10 (Build37)6 (Build37)
Map Location 104,053,903 - 104,054,363107,579,295 - 107,579,382
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-067H15.bB6Ng01-067H15.g
ACCDH886355DH886356
length82188
definitionDH886355|Mus musculus domesticus DNA, BAC clone: B6Ng01-067H15, 5' end.DH886356|Mus musculus domesticus DNA, BAC clone: B6Ng01-067H15, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(104,053,903 - 104,054,363)(107,579,295 - 107,579,382)
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ctcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggagatcagtctggcggttcctca
gaaaactggatatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaggaacccagat
gcccctcaacagaggaatggatacagaagatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctggccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactctgataagtggatattagcccaaaaccta
agatacccaagatataagatacaatttcctaaacacatgaaactcaagaa
aaatgaagactgaagtgtgaacactatgcccctccttagaagtgggagca
aaacacccttggaaggagttacagagacaaagtttggagctgagataaag
gatggaccatgtagacactaccatatccggggatccatcccataatcagc
ttccaaatgctgacaccattg
aatagcacatctttatgttgttcattgctcccaaatggtggtgggttccc
ttttgggaaggtgtgtgtgtgtgtgtgtgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053903_104054363
seq2: B6Ng01-067H15.b_48_518 (reverse)

seq1  TTTAATAG----------CTCCATTGTGTAAATGTACCACATTTTCTGTA  40
      ||||||||          |||||||||||| ||||||||||| |||||||
seq2  TTTAATAGCTGAGTAGTACTCCATTGTGTAGATGTACCACATCTTCTGTA  50

seq1  TCTATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTCCTGGCTATT  90
      || |||||||||||||||||||||||||||| |||||||| |||||||||
seq2  TCCATTCCTCTGTTGAGGGGCATCTGGGTTCCTTCCAGCTTCTGGCTATT  100

seq1  ATAAATAAGGCTGCTATGAATATAGTGGAGCATGTGTCCTTCTTACCGGT  140
      |||||||||||||||||||| |||||||||||||||||||||||||| ||
seq2  ATAAATAAGGCTGCTATGAACATAGTGGAGCATGTGTCCTTCTTACCAGT  150

seq1  TGGGGCATCTTCTGGATATATGCCCAGAAGAGGTATTGCTGGATCCTCCG  190
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TGGGGCATCTTCTGGATATATGCCCAGGAGAGGTATTGCTGGATCCTCCG  200

seq1  GTAGTACTATGTCCAATTTTCTGACGAACCGCCAGACGGATTTCCAGAGT  240
      |||||||||| |||| |||||||| |||||||||||| ||| ||||||||
seq2  GTAGTACTATATCCAGTTTTCTGAGGAACCGCCAGACTGATCTCCAGAGT  250

seq1  GGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTC  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTC  300

seq1  TCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCA  340
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TCCACATCCACGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCA  350

seq1  TTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCC  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCC  400

seq1  CTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTCG  440
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CTGATGATTAAGGATGTTGAGCATTTTTTCAGGTGCTTCTCTGCCATTCG  450

seq1  GTATTCCTCAGGTGAGAATTC  461
      |||||||||||||||||||||
seq2  GTATTCCTCAGGTGAGAATTC  471

seq1: chr6_107579295_107579382
seq2: B6Ng01-067H15.g_72_159 (reverse)

seq1  ACACACACACACACACACACACACACACCTTCCCAAAAGGGAACCCACCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACCTTCCCAAAAGGGAACCCACCA  50

seq1  CCATTTGGGAGCAATGAACAACATAAAGATGTGCTATT  88
      ||||||||||||||||||||||||||||||||||||||
seq2  CCATTTGGGAGCAATGAACAACATAAAGATGTGCTATT  88