BAC Information

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BAC

Clone NameB6Ng01-069B10
Chromosome6 (Build37)
Map Location 75,765,406 - 75,766,512
singlet/doubletsinglet
Overlap genenone
Upstream geneEG668132, LOC668136, LOC621306, LOC100042942, LOC668143, EG668145
Downstream geneEG546907, LOC100042952, LOC668153, EG668155, LOC100042956
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-069B10.bB6Ng01-069B10.g
ACCDH887496DH887497
length1,1451,095
definitionDH887496|Mus musculus domesticus DNA, BAC clone: B6Ng01-069B10, 5' end.DH887497|Mus musculus domesticus DNA, BAC clone: B6Ng01-069B10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagttctgtaccccagttttaataaggttatttggttt
tctagagtcgaacttcttgagggttttgtatatatttgatattagccgtc
tatcagatgtatggttggtaaagatcttttccaaatctgttggttccggt
tttgtcctttagatggtgtcctttgccttacagaagctttgaaattttaa
gaagtcccatttttcagttggtgactttagagtataagctactggtgttc
tgttcaggaaaatattccctgtgtccatgtgcttgaggctcttccccact
ttcattttttttagtttcattgtacctgattgtatgtggaggtccttgat
ccacagggacttgagttttgtacaaagagataagaatggatcgatttgca
ttcttttacatgctaatcaacagttgaaccagcaccatattcatgaggta
cctataggccccaaggcttagccaataaactttctttcccagacattcct
ccatgctaaaggtatttaacttcacacccacactgagaagtggggtatgg
ttctactcatccactttctatcatggcaataaatgtcttaaaacaatgga
ctgtctcttttcatagggatctaccatggggagccccagagaaggccttt
gacttcagaggtgctgtctaatcttctcatagaaggcctcgctggactcc
agccatggcttccaccaagccaagttcaaggccactgccaccaaggtcaa
gccaagactgctgctgctgacaagccaatggctcatccagtggcacctga
gtgtctgagagtctgagaacaagagggccccagcctcatcacaggccggg
ggtctgtgcttttctacccctgaagcagtgtcccagggcttccttatagc
ccgaacaaaagcccagtaacagcatggacaaatggtccacctccccagag
gctgtgccctgtggcagaggggatgcagacctcagaccctatacagacta
atgctgttttctggaggtgagaatgatgataggagtgagcctttatcttt
tatttcataataggaatgtgtacttcctcttcatatcatgtagatttctg
attccaaaacataattatcacgattgaatattctttgtgcctctg
gaattcagagtgtagtactacaaaagaagaataaactcagaaccaagaaa
tccatctcaaaatagagataagtggataactaataacaggaatgtacttt
gagatctctgcctttaaagacatggtatgaatttatgaaaacatcaagaa
tttggagcaagtctttaagatttaagaccatcaagattaagaagtcagag
tcagttgctgaaatagcttctccaagatatgttctctctgccttcgagga
cctctctccacctcactgatgggctcactaaaccaatagcactatggttt
tcttaggtgtcaaaaacattctttgctactctctgatcacatttaagtca
tccaggttagttctaacgtatttatggacttcactttgatgtaaaaattt
tagttactatttacttttgtaaattttgaggactatttttcaggtaaaat
gtacagtccccccacctgttacttgatctctttctcatgatttgatgaga
tttttagtggttttgagggcaagtatggagataaatgttttatgtttgtg
tttaattttatccaagtgtgatatatatgtctatatattgtttgtgaatg
agcatatgctcttatgcctgtacatagtgaagtcagaggaagttatcagg
ttgtcattgtctactgttcttcaacttattctctcaagtcaatttctttc
actgaacctagacctcaacatttaacagctaaactgccagcctataatgc
cctgacatcattctatatctgccattctacatccccaggagcactggggt
tacagatgttggacccagaaagactttttacttatgtactgataaagact
aactcaggtcttcctaatagcacatgaagtatccttaggtagcatccatt
ctgtcccgttcttgaaatgacattttttttctcattacaacaggtgtcag
tgtggattatgtagtgtcacacaggaatatatatatcactgttcatataa
ccttcacaactgctgagatagtatgaagacaatcgcttcttttctggagg
tgatacttgaaaatctattaaagcgtctgacttctgctgaaagat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_75765406_75766512
seq2: B6Ng01-069B10.g_67_1161

seq1  GAATTCAGAGTGTAGTACTACAAAAGAAGAATAAACTCAGAACCAAGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAGTGTAGTACTACAAAAGAAGAATAAACTCAGAACCAAGAAA  50

seq1  TCCATCTCAAAATAGAGATAAGTGGATAACTAATAACAGGAATGTACTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCTCAAAATAGAGATAAGTGGATAACTAATAACAGGAATGTACTTT  100

seq1  GAGATCTCTGCCTTTAAAGACATGGTATGAATTTATGAAAACATCAAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATCTCTGCCTTTAAAGACATGGTATGAATTTATGAAAACATCAAGAA  150

seq1  TTTGGAGCAAGTCTTTAAGATTTAAGACCATCAAGATTAAGAAGTCAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAGCAAGTCTTTAAGATTTAAGACCATCAAGATTAAGAAGTCAGAG  200

seq1  TCAGTTGCTGAAATAGCTTCTCCAAGATATGTTCTCTCTGCCTTCGAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTGCTGAAATAGCTTCTCCAAGATATGTTCTCTCTGCCTTCGAGGA  250

seq1  CCTCTCTCCACCTCACTGATGGGCTCACTAAACCAATAGCACTATGGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCTCCACCTCACTGATGGGCTCACTAAACCAATAGCACTATGGTTT  300

seq1  TCTTAGGTGTCAAAAACATTCTTTGCTACTCTCTGATCACATTTAAGTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGGTGTCAAAAACATTCTTTGCTACTCTCTGATCACATTTAAGTCA  350

seq1  TCCAGGTTAGTTCTAACGTATTTATGGACTTCACTTTGATGTAAAAATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGTTAGTTCTAACGTATTTATGGACTTCACTTTGATGTAAAAATTT  400

seq1  TAGTTACTATTTACTTTTGTAAATTTTGAGGACTATTTTTCAGGTAAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTACTATTTACTTTTGTAAATTTTGAGGACTATTTTTCAGGTAAAAT  450

seq1  GTACAGTCCCCCCACCTGTTACTTGATCTCTTTCTCATGATTTGATGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAGTCCCCCCACCTGTTACTTGATCTCTTTCTCATGATTTGATGAGA  500

seq1  TTTTTAGTGGTTTTGAGGGCAAGTATGGAGATAAATGTTTTATGTTTGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAGTGGTTTTGAGGGCAAGTATGGAGATAAATGTTTTATGTTTGTG  550

seq1  TTTAATTTTATCCAAGTGTGATATATATGTCTATATATTGTTTGTGAATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTTTATCCAAGTGTGATATATATGTCTATATATTGTTTGTGAATG  600

seq1  AGCATATGCTCTTATGCCTGTACATAGTGAAGTCAGAGGAAGTTATCAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATATGCTCTTATGCCTGTACATAGTGAAGTCAGAGGAAGTTATCAGG  650

seq1  TTGTCATTGTCTACTGTTCTTCAACTTATTCTCTCAAGTCAATTTCTTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCATTGTCTACTGTTCTTCAACTTATTCTCTCAAGTCAATTTCTTTC  700

seq1  ACTGAACCTAGACCTCAACATTTAACAGCTAAACTGCCAGCCTATAATGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAACCTAGACCTCAACATTTAACAGCTAAACTGCCAGCCTATAATGC  750

seq1  CCTGACATCATTCTATATCTGCCATTCTACATCCCCAGGAGCACTGGGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACATCATTCTATATCTGCCATTCTACATCCCCAGGAGCACTGGGGT  800

seq1  TACAGATGTTGGACCCAGAAAGACTTTTTACTTATGTACTGATAAAGACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGATGTTGGACCCAGAAAGACTTTTTACTTATGTACTGATAAAGACT  850

seq1  AACTCAGGTCTTCCTAATAGCACATGAAGTATCCTTAGGTAGCATCCA-T  899
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AACTCAGGTCTTCCTAATAGCACATGAAGTATCCTTAGGTAGCATCCATT  900

seq1  CTGTCCCGTTCTTGAAATGACATTTTTTTTTCTCATTACAACAGGTGTCA  949
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CTGTCCCGTTCTTGAAATGACA-TTTTTTTTCTCATTACAACAGGTGTCA  949

seq1  GTGTGGGATTATGTAGTGTCAACACAGGAATATAATATATCACTGTCAAT  999
      |||| ||||||||||||||| |||||||||||| ||||||||||||  ||
seq2  GTGT-GGATTATGTAGTGTC-ACACAGGAATAT-ATATATCACTGTTCAT  996

seq1  AATAACCTTCACCAACAGGCTGAGATAGTTATGAAGACAATCGCCTTCCT  1049
       |||||||||| ||||  |||||||||| |||||||||||||||  | ||
seq2  -ATAACCTTCA-CAAC-TGCTGAGATAG-TATGAAGACAATCGC--TTCT  1040

seq1  TTTCATGGAGGTGATTACTGAAAGATCTATATAAAGCGTCTGACTTCTGC  1099
      |||| ||||||||| ||||  || |||||| |||||||||||||||||||
seq2  TTTC-TGGAGGTGA-TACTTGAAAATCTAT-TAAAGCGTCTGACTTCTGC  1087

seq1  TGAAAGAT  1107
      ||||||||
seq2  TGAAAGAT  1095