BAC Information

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BAC

Clone NameB6Ng01-071K06
Chromosome6 (Build37)
Map Location 130,780,705 - 130,781,616
singlet/doubletsinglet
Overlap geneEG636947
Upstream geneKlra17, Klra5, LOC667764, Klra6, LOC100038893, LOC100038894, LOC100038895, Klra4, LOC667769, LOC100038897, Klra8, EG654449, Klra9, Klra7, LOC100038898, Klra12, Klra10, Klra13, Klra3, Klra1, LOC100038902, LOC100038903, LOC625436, EG625473, LOC640779, LOC667793, EG667798, EG625558, LOC625566
Downstream geneLOC625628, EG625648, LOC667830, EG434094, Klra2, LOC434095, 2010012C16Rik, Styk1, Csda, LOC625758, 5430401F13Rik, LOC625781, Tas2r130, Tas2r107, Tas2r106, Tas2r104, Tas2r105, Tas2r114
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-071K06.bB6Ng01-071K06.g
ACCDH889283DH889284
length1,295936
definitionDH889283|Mus musculus domesticus DNA, BAC clone: B6Ng01-071K06, 5' end.DH889284|Mus musculus domesticus DNA, BAC clone: B6Ng01-071K06, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcactcttatttttatttttttcaaatcataggaggtcgcaaaa
tagggaaagggaaaggcccttttttatttattgtaaatgccaatatattt
agtacttgaatctctgtttgccactttggttttcaagcaaacagtataag
gatacttagggcatttgcattacagtgtgtgtgtgtgaatagagcaatga
atatcagggtatagcaagcatctatggagtagaatagtgaggcctttgta
catataccaatgagaggtacacatctgtgccatgtgttactttctgagaa
ttcttcacatagatttccatagatgatttgctagttttcaatcttgcaaa
tctaaatttcccatttcccttcagcatttttaactgggtatttatttcat
ttacatttccaatgctatcccaaaagttccccacacactcccccacccat
tctcctacccactctcctacccaccaacgcccacttcttggcctttgcat
tcccctgtactgaggcatataaagtttgcacgaccaataggtctctcttt
ccactgatggccgactagtccatcttctgattcatatgcagctagagaca
caagctccgtggggctattgattagttcatattgctcttccacctatagg
attgcagatcccgtcagctccttgggcactttctctagctcctccattgg
gagccctgtgatccatccaatagctgactgtgagcatccacttctgtgtt
tgcattcctgcatagcttgttcataaaccaatttttcaattaaaggcata
gctgcttctgggtcttcaaatatcctcccagctgcctctgtcattctgcc
acaaagtctgagaaggactcctgtgcaccatgagtaatcttggtcaaatg
cccacttgcctctcctttcttagagagtgccttccatgccttaacagcag
cagctaagatctgagcatatgctccccaatgataatctgttaggttagca
gcatgctccccctgacctgtaagtaattcaaatgtccaagttctttgggt
cccctccaatggtggcattggcccttggcctgcaatctggcaggaagtct
gccccagccttccactcaagatacattccccatacttgtggctgcagctt
tacctacagtctgccaatcaccaaggagtcatagcgtgatcgcaagcttc
aacttggcctatgaattagctgaatcgtaattgcgaactgctctctggta
gctccctaactctggatatatactctaccaagagcgacgtgtgac
gaattcattcctatatttctaattagcaaattgtgcccaatgtggtgcct
cggtgctggcggtgactggagtgcagccagcattaagctcaatggaggca
gaatgaagtctttaatggtggtataccatctgttttccttttccaaacta
gaaagagaaatggagtgatctttggcaaatggtatggttcttggtcctca
cgtacctttatgtcatccacataccaggaagaagggagaaggcagaacct
gggagggacagaactggtctgattctaagtgaacaccaaaagtaaggagt
gggtaaataagtcctttttcttcaagagacagaggctcggctctttaaga
tgaagtccctcctgggggttttcctttttgaagagttgaatcttctttgt
tcatactggtttatttgatggtgtatgtgaatgcatacactttatttctg
gtgaaccaggaaatatataacctttgtggaaaagaatattcaataaggaa
gtcaactggatgaatgataggttgtctccatactgcataagcatgaagaa
ctaaaaccatctggccctaggatttattgtttgggagatctttagagact
gtttttattctttttattttatttttaatttatttgttacactccatatt
ccattccctaacacctcatcctccctccatctgctccacatccaaatcct
tctccataccccaccctatctccacgaaggtgccccaacctcacctgacc
tctaaactccctagggcctccagtctcttcagggttaggtgcatcatctc
tgaaagaacacagacccagaagtcctcaactggatgtgtgttgggggcct
catatcaggtggtgtatgctgtatgtttggtggttcagtgtttgagagat
ttcagtggtctggattaattgagactgctgttcctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_130780705_130781616
seq2: B6Ng01-071K06.g_65_976

seq1  GAATTCATTCCTATATTTCTAATTAGCAAATTGTGCCCAATGTGGTGCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTCCTATATTTCTAATTAGCAAATTGTGCCCAATGTGGTGCCT  50

seq1  CGGTGCTGGCGGTGACTGGAGTGCAGCCAGCATTAAGCTCAATGGAGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTGCTGGCGGTGACTGGAGTGCAGCCAGCATTAAGCTCAATGGAGGCA  100

seq1  GAATGAAGTCTTTAATGGTGGTATACCATCTGTTTTCCTTTTCCAAACTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAAGTCTTTAATGGTGGTATACCATCTGTTTTCCTTTTCCAAACTA  150

seq1  GAAAGAGAAATGGAGTGATCTTTGGCAAATGGTATGGTTCTTGGTCCTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGAAATGGAGTGATCTTTGGCAAATGGTATGGTTCTTGGTCCTCA  200

seq1  CGTACCTTTATGTCATCCACATACCAGGAAGAAGGGAGAAGGCAGAACCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTACCTTTATGTCATCCACATACCAGGAAGAAGGGAGAAGGCAGAACCT  250

seq1  GGGAGGGACAGAACTGGTCTGATTCTAAGTGAACACCAAAAGTAAGGAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGGACAGAACTGGTCTGATTCTAAGTGAACACCAAAAGTAAGGAGT  300

seq1  GGGTAAATAAGTCCTTTTTCTTCAAGAGACAGAGGCTCGGCTCTTTAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAAATAAGTCCTTTTTCTTCAAGAGACAGAGGCTCGGCTCTTTAAGA  350

seq1  TGAAGTCCCTCCTGGGGGTTTTCCTTTTTGAAGAGTTGAATCTTCTTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTCCCTCCTGGGGGTTTTCCTTTTTGAAGAGTTGAATCTTCTTTGT  400

seq1  TCATACTGGTTTATTTGATGGTGTATGTGAATGCATACACTTTATTTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATACTGGTTTATTTGATGGTGTATGTGAATGCATACACTTTATTTCTG  450

seq1  GTGAACCAGGAAATATATAACCTTTGTGGAAAAGAATATTCAATAAGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAACCAGGAAATATATAACCTTTGTGGAAAAGAATATTCAATAAGGAA  500

seq1  GTCAACTGGATGAATGATAGGTTGTCTCCATACTGCATAAGCATGAAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAACTGGATGAATGATAGGTTGTCTCCATACTGCATAAGCATGAAGAA  550

seq1  CTAAAACCATCTGGCCCTAGGATTTATTGTTTGGGAGATCTTTAGAGACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAACCATCTGGCCCTAGGATTTATTGTTTGGGAGATCTTTAGAGACT  600

seq1  GTTTTTATTCTTTTTATTTTATTTTTAATTTATTTGTTACACTCCATATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTATTCTTTTTATTTTATTTTTAATTTATTTGTTACACTCCATATT  650

seq1  CCATTCCCTAACACCTCATCCTCCCTCCATCTGCTCCACATCCAAATCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCCCTAACACCTCATCCTCCCTCCATCTGCTCCACATCCAAATCCT  700

seq1  TCTCCATACCCCACCCTATCTCCACGAAGGTGCCCCAACCTCACCTGACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCATACCCCACCCTATCTCCACGAAGGTGCCCCAACCTCACCTGACC  750

seq1  TCTAAACTCCCTAGGGCCTCCAGTCTCTTCAGGGTTAGGTGCATCATCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAACTCCCTAGGGCCTCCAGTCTCTTCAGGGTTAGGTGCATCATCTC  800

seq1  TGAAAGAACACAGACCCAGAAGTCCTCAACTGGATGTGTGTTGGGGGCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGAACACAGACCCAGAAGTCCTCAACTGGATGTGTGTTGGGGGCCT  850

seq1  CATATCAGGTGGTGTATGCTGTATGTTTGGTGGTTCAGTGTTTGAGAGAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATCAGGTGGTGTATGCTGTATGTTTGGTGGTTCAGTGTTTGAGAGAT  900

seq1  TTCAGTGGTCTG  912
      ||||||||||||
seq2  TTCAGTGGTCTG  912