BAC Information

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BAC

Clone NameB6Ng01-074J02
Chromosome6 (Build37)
Map Location 136,953,044 - 137,077,354
singlet/doubletdoublet
Overlap geneRerg
Upstream geneGrin2b, EG668137, LOC545887, E330021D16Rik, EG627022, LOC100043893, Atf7ip, 1100001H23Rik, LOC100043894, Gucy2c, Hist4h4, H2afj, Wbp11, BC049715, C030030A07Rik, Art4, Mgp, Erp27, Arhgdib, Pde6h
Downstream genePtpro, Eps8, Strap, Dera, 9830102E05Rik
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-074J02.bB6Ng01-074J02.g
ACCDH891379DH891380
length3141,066
definitionDH891379|Mus musculus domesticus DNA, BAC clone: B6Ng01-074J02, 5' end.DH891380|Mus musculus domesticus DNA, BAC clone: B6Ng01-074J02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(136,953,044 - 136,953,357)(137,076,293 - 137,077,354)
sequence
ccaggggataggatgtggctgccctaagcaacactgtgcgtattaaagga
cgaccaaacctgatagcatacatactctctttctgtgtctccatccctga
cagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagtgtaaaaga
gcatattactgagctgagtggagaaggctatcctcaccagcacggctgac
agggctcacattgaagaaaaaggcagaggaaagatgactttactctctct
tctagagcaaggatgtcaggaccaagggtgtcagatctcctggaattgga
gctaggaagggttg
gaattcttgctatgtttggtggttttaaatgaagatagatagatagatag
atagatagatagatagatagatagatagatagatagatagatagatagat
agataaagacatttgcctcatgctgctgggtatgagtccaaactcaattg
tctgacctttggaaccattttttgcctgttgctgtctccaggtccgttta
cgattaaggcttaagaagaagttatttagaaaggataaagaattctgtta
gcagaaactcaagagatccaaagagttacattatttttagttgtgtgtat
ggctggacatgtttaggtaagggtaggtgtgtgcccatgcaggccagaag
aggaagtataagaccttggagccgataggagtggatttaaagtgcatgat
gtaggtgtgggagccaaacttcagtctcctgcaagagcagcaagtgctct
taagctttgatggtgctcctgatgatcccagacgatcctgttcaaacact
tctcagactgttttctgttgctgtgataaaataccagggactgggcaaat
tataaccaagttaggttatttggccaatggttttggttctgaaaggatgg
tgctggcttcaagcatagacattcttgttatgtcacagccttgtaacaga
ccaagtgagttggaaagaaatagaagaaaacgtatgtctgaactctcatt
gtaactaacctacgcccttcataacggcagtattctttccatttcagtaa
agcatcagcagtctcctacagatctcccatcttgatacccttaccattaa
gttaaatttcagcaagcattctagaaggcctgttcaagtcatatcgaaat
ttaatctgttttcagattttttttttttaagcaagtcccctctgacactg
aatggtgccagggactgtattggattctccaaggcacgagaaacaggaag
tgaaattgcagagggctcctgatgcgttcactgtgacattctctgtaaat
agcaagccgtgaagtcatatgtgacggtgaccttcaaagaccatgctacc
tgacaggaatatgact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_136953044_136953357
seq2: B6Ng01-074J02.b_54_367

seq1  CCAGGGGATAGGATGTGGCTGCCCTAAGCAACACTGTGCGTATTAAAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGGATAGGATGTGGCTGCCCTAAGCAACACTGTGCGTATTAAAGGA  50

seq1  CGACCAAACCTGATAGCATACATACTCTCTTTCTGTGTCTCCATCCCTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACCAAACCTGATAGCATACATACTCTCTTTCTGTGTCTCCATCCCTGA  100

seq1  CAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGTGTAAAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGTGTAAAAGA  150

seq1  GCATATTACTGAGCTGAGTGGAGAAGGCTATCCTCACCAGCACGGCTGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATTACTGAGCTGAGTGGAGAAGGCTATCCTCACCAGCACGGCTGAC  200

seq1  AGGGCTCACATTGAAGAAAAAGGCAGAGGAAAGATGACTTTACTCTCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTCACATTGAAGAAAAAGGCAGAGGAAAGATGACTTTACTCTCTCT  250

seq1  TCTAGAGCAAGGATGTCAGGACCAAGGGTGTCAGATCTCCTGGAATTGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGAGCAAGGATGTCAGGACCAAGGGTGTCAGATCTCCTGGAATTGGA  300

seq1  GCTAGGAAGGGTTG  314
      ||||||||||||||
seq2  GCTAGGAAGGGTTG  314

seq1: chr6_137076293_137077354
seq2: B6Ng01-074J02.g_70_1135 (reverse)

seq1  AGTCATATCACTGCCAGGTAGCATTGTCCTCTGAGGTCACCGTCACATAT  50
      ||||||||  ||| |||||||||| ||| |   |||||||||||||||||
seq2  AGTCATATTCCTGTCAGGTAGCATGGTCTTTGAAGGTCACCGTCACATAT  50

seq1  GACTTCACGGCTTTGCTATTTACAGAGAATGTCACAGTGAACGCCATCAG  100
      ||||||||||| ||||||||||||||||||||||||||||||| ||||||
seq2  GACTTCACGGC-TTGCTATTTACAGAGAATGTCACAGTGAACG-CATCAG  98

seq1  GAGCCCTCTGCAAATTCACTTCCTGTTTCTCGTGCCTTGAAGAATCAATT  150
      ||||||||||||| ||||||||||||||||||||||||| |||||| | |
seq2  GAGCCCTCTGCAATTTCACTTCCTGTTTCTCGTGCCTTGGAGAATCCAAT  148

seq1  ACAGTCCCTGGCACCATTCAGTGTCAGAGGGGACTTTGCTT-AAAAAAAA  199
      |||||||||||||||||||||||||||||||||| |||||| ||||||||
seq2  ACAGTCCCTGGCACCATTCAGTGTCAGAGGGGAC-TTGCTTAAAAAAAAA  197

seq1  AAATCTG-AAACAGATTAAATTTCGATATGACTTGAACAGGCCTTCTAGA  248
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTGAAAACAGATTAAATTTCGATATGACTTGAACAGGCCTTCTAGA  247

seq1  ATGCTTGCTGAAATTTAACTTAATGGTAAGGGTATCAAGATGGGAGATCT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTGCTGAAATTTAACTTAATGGTAAGGGTATCAAGATGGGAGATCT  297

seq1  GTAGGAGACTGCTGATGCTTTACTGAAATGGAAAGAATACTGCCGTTATG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGAGACTGCTGATGCTTTACTGAAATGGAAAGAATACTGCCGTTATG  347

seq1  AA-GGCGTAGGTTAGTTACAATGAGAGTTCAGACATACGTTTTCTTCTAT  397
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGCGTAGGTTAGTTACAATGAGAGTTCAGACATACGTTTTCTTCTAT  397

seq1  TTCTTTCCAACTCACTTGGTCTGTTACAAGGCTGTGACATAACAAGAATG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCCAACTCACTTGGTCTGTTACAAGGCTGTGACATAACAAGAATG  447

seq1  TCTATGCTTGAAGCCAGCACCATCCTTTCAGAACCAAAACCATTGGCCAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGCTTGAAGCCAGCACCATCCTTTCAGAACCAAAACCATTGGCCAA  497

seq1  ATAACCTAACTTGGTTATAATTTGCCCAGTCCCTGGTATTTTATCACAGC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCTAACTTGGTTATAATTTGCCCAGTCCCTGGTATTTTATCACAGC  547

seq1  AACAGAAAACAGTCTGAGAAGTGTTTGAACAGGATCGTCTGGGATCATCA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAAAACAGTCTGAGAAGTGTTTGAACAGGATCGTCTGGGATCATCA  597

seq1  GGAGCACCATCAAAGCTTAAGAGCACTTGCTGCTCTTGCAGGAGACTGAA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCACCATCAAAGCTTAAGAGCACTTGCTGCTCTTGCAGGAGACTGAA  647

seq1  GTTTGGCTCCCACACCTACATCATGCACTTTAAATCCACTCCTATCGGCT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGCTCCCACACCTACATCATGCACTTTAAATCCACTCCTATCGGCT  697

seq1  CCAAGGTCTTATACTTCCTCTTCTGGCCTGCATGGGCACACACCTACCCT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGGTCTTATACTTCCTCTTCTGGCCTGCATGGGCACACACCTACCCT  747

seq1  TACCTAAACATGTCCAGCCATACACACAACTAAAAATAATGTAACTCTTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTAAACATGTCCAGCCATACACACAACTAAAAATAATGTAACTCTTT  797

seq1  GGATCTCTTGAGTTTCTGCTAACAGAATTCTTTATCCTTTCTAAATAACT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTCTTGAGTTTCTGCTAACAGAATTCTTTATCCTTTCTAAATAACT  847

seq1  TCTTCTTAAGCCTTAATCGTAAACGGACCTGGAGACAGCAACAGGCAAAA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTAAGCCTTAATCGTAAACGGACCTGGAGACAGCAACAGGCAAAA  897

seq1  AATGGTTCCAAAGGTCAGACAATTGAGTTTGGACTCATACCCAGCAGCAT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTTCCAAAGGTCAGACAATTGAGTTTGGACTCATACCCAGCAGCAT  947

seq1  GAGGCAAATGTCTT----TATCTATCTATCTATCTATCTATCTATCTATC  993
      ||||||||||||||    ||||||||||||||||||||||||||||||||
seq2  GAGGCAAATGTCTTTATCTATCTATCTATCTATCTATCTATCTATCTATC  997

seq1  TATCTATCTATCTATCTATCTATCTATCTATCTATCTTCATTTAAAACCA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTATCTATCTATCTATCTATCTATCTATCTATCTTCATTTAAAACCA  1047

seq1  CCAAACATAGCAAGAATTC  1062
      |||||||||||||||||||
seq2  CCAAACATAGCAAGAATTC  1066