BAC Information

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BAC

Clone NameB6Ng01-074J16
Chromosome6 (Build37)
Map Location 124,720,413 - 124,720,733
singlet/doubletsinglet
Overlap geneLrrc23
Upstream geneEG243628, EG545874, LOC384484, LOC623282, V2r1b, EG384486, Vmn2r-ps34, Vmn2r27, LOC623374, EG622297, Cd163, LOC100043530, 1700013D24Rik, 1700027F06Rik, 1700060L04Rik, Pex5, Clstn3, C1rl, C1r, C1s, LOC667277, EG317677, Mboat5, Emg1, Phb2, Ptpn6, Grcc10, Atn1, Eno2
Downstream geneSpsb2, Tpi1, Usp5, Cdca3, Gnb3, Leprel2, Gpr162, Cd4, Lag3, Ptms, Mlf2, EG667343, Cops7a, C530028O21Rik, Zfp384, Ing4, Acrbp, Gpr92, Chd4, Nol1, A930037G23Rik, Gapdh, Ncapd2, Mrpl51, Vamp1, Tapbpl, Cd27, 4930417O13Rik, Tuba3a, Ltbr, Scnn1a, Tnfrsf1a, Plekhg6, Cd9, Vwf, Tmem16b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-074J16.bB6Ng01-074J16.g
ACCDH891402DH891403
length1,175321
definitionDH891402|Mus musculus domesticus DNA, BAC clone: B6Ng01-074J16, 5' end.DH891403|Mus musculus domesticus DNA, BAC clone: B6Ng01-074J16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgatat
tccacctcacaccagtcagaatgtctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaacg
gagtactactcaggtattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatacccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccttatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgactcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
atggaggagctagagaaagtacccaagagctaaagggatctgcacctata
gttggatcacattatgactaaccagtaccccagagctcttgacttctagc
tgcatatgtatcaagaatggcctagtctgcatcactgggaaagagaaggc
caatgacacacaactttatatgccaaacgggacgcatggtcaaatggggg
aatgggcgggttaggtgagatggtg
tatgaggatgatgaccgggcagaggccgaggagatccgtcagaggctgaa
ggaggaacaggatcaagatctcgatccggaccaggacatggaaccgtact
tgccaccagtttagtggctcttccagcctgcagggacagtaaaggtgatg
ccaggaagacagccccaggaggtcaaaggctgggcacacgggacgagagg
ccagagttaggggctggagatagcttagatatgaaggaaagatgagaggg
gcccagaaagtgataagacacgcaggagaccacagtagagagaagaacta
attgggggtgggggtggggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_124720413_124720733
seq2: B6Ng01-074J16.g_75_395 (reverse)

seq1  CACCCCACCCCCACCCCCAATTAGTTCTTCTCTCTACTGTGGTCTCCTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCACCCCCACCCCCAATTAGTTCTTCTCTCTACTGTGGTCTCCTGC  50

seq1  GTGTCTTATCACTTTCTGGGCCCCTCTCATCTTTCCTTCATATCTAAGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTTATCACTTTCTGGGCCCCTCTCATCTTTCCTTCATATCTAAGCT  100

seq1  ATCTCCAGCCCCTAACTCTGGCCTCTCGTCCCGTGTGCCCAGCCTTTGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCAGCCCCTAACTCTGGCCTCTCGTCCCGTGTGCCCAGCCTTTGAC  150

seq1  CTCCTGGGGCTGTCTTCCTGGCATCACCTTTACTGTCCCTGCAGGCTGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGGGGCTGTCTTCCTGGCATCACCTTTACTGTCCCTGCAGGCTGGA  200

seq1  AGAGCCACTAAACTGGTGGCAAGTACGGTTCCATGTCCTGGTCCGGATCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCACTAAACTGGTGGCAAGTACGGTTCCATGTCCTGGTCCGGATCG  250

seq1  AGATCTTGATCCTGTTCCTCCTTCAGCCTCTGACGGATCTCCTCGGCCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTTGATCCTGTTCCTCCTTCAGCCTCTGACGGATCTCCTCGGCCTC  300

seq1  TGCCCGGTCATCATCCTCATA  321
      |||||||||||||||||||||
seq2  TGCCCGGTCATCATCCTCATA  321