BAC Information

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BAC

Clone NameB6Ng01-077H06
Chromosome6 (Build37)
Map Location 16,234,891 - 16,235,486
singlet/doubletsinglet
Overlap genenone
Upstream geneFoxp2, Mdfic, LOC100041116
Downstream geneTcfec, EG435881, Tes, EG232599, Cav2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-077H06.bB6Ng01-077H06.g
ACCDH893424DH893425
length595694
definitionDH893424|Mus musculus domesticus DNA, BAC clone: B6Ng01-077H06, 5' end.DH893425|Mus musculus domesticus DNA, BAC clone: B6Ng01-077H06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctctaaatgtttactagtgtacaattttattttactctgcatg
ttcccaaatgtacatcagacttcattgatccttctgtccttcattcctgc
ctgtgttggcaacatatttaagtagaaagtgtctaaatgtaattaaatgt
aattgttacaggtgacgggaaacttacactattgttctgagattggaata
cttgtagcctgatgcaggaagggtcatatatacccatacattctctctct
ctctctctctctctctctctctctctctctctctctctctctcacacaca
cacacacacacacacacacacatacacacacatacatatatataatatat
caccacatatgatgcatgccatatgcacaccattacattttatatatata
aattaaagacatgaatgcataacagtaatagaatgtatatcagtgtaatt
aagactactcgttactgaaagggtttggcagtgaaagaacatcttggcaa
tcaagggccaatgaataccacaaaattcacaccatgaaacaaacttcaca
cagagatgtgttgtttgtatgggtggtggtggcagggtgtgtgtg
gaattctctctctctctctctctctctctctctctctctctctctctctg
tctctattatttaatctaataattatttaattttcttatttttttcaata
ctggtcctttgcataaatatgatagtttccagttctgtatttttacagga
ttcatgactgtggaaatgagtggatccgtgtctatttctgttccttgtgc
cttttatttttaggcagttctccttttgtttgtttgcttgtttcctattg
tgatacattttcttatattttattagattacattttattgctagccatta
tatgcctgtttgttttctagtgaaagacaggttgggggtgatccagatag
gtgtgagatgaagaagaactgggagaggtggaagaggaaaacatcatgag
aatatagtgtataaagatattttaaccaaaagaaaatactcattctttta
aactacctggatgccctggatcaaagctcctcttgtctccacttccacag
gtctgggactacaagtgttcaccactacagctgtcttttatgtgggattt
gcacattgacctcaagcccttatgtctgcgcatcagaacttttctcatat
agctgtgtccctccccctatcaaatgatttcattatattatctgcccaaa
gaaatattttcaactactttcctataattcatcaaaggctaaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_16234891_16235486
seq2: B6Ng01-077H06.b_45_639

seq1  GAATTCTCTCTAAATGTTTACTAGTGTACAATTTTATTTTACTCTGCATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCTAAATGTTTACTAGTGTACAATTTTATTTTACTCTGCATG  50

seq1  TTCCCAAATGTACATCAGACTTCATTGATCCTTCTGTCCTTCATTCCTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCAAATGTACATCAGACTTCATTGATCCTTCTGTCCTTCATTCCTGC  100

seq1  CTGTGTTGGCAACATATTTAAGTAGAAAGTGTCTAAATGTAATTAAATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTTGGCAACATATTTAAGTAGAAAGTGTCTAAATGTAATTAAATGT  150

seq1  AATTGTTACAGGTGACGGGAAACTTACACTATTGTTCTGAGATTGGAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTTACAGGTGACGGGAAACTTACACTATTGTTCTGAGATTGGAATA  200

seq1  CTTGTAGCCTGATGCAGGAAGGGTCATATATACCCATACATTCTCTCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTAGCCTGATGCAGGAAGGGTCATATATACCCATACATTCTCTCTCT  250

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACA  300

seq1  CACACACACACACACACACACATACACACACATACATATATATAATATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACATACACACACATACATATATATAATATAT  350

seq1  CACCACATATGATGCATGCCATATGCACACCATTACATTTTATATATATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACATATGATGCATGCCATATGCACACCATTACATTTTATATATATA  400

seq1  AATTAAAGACATGAATGCATAACAGTAATAGAATGTATATCAGTGTAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAAGACATGAATGCATAACAGTAATAGAATGTATATCAGTGTAATT  450

seq1  AAGACTACTCGTTACTGAAAGGGTTTGGCAGTGAAAGAACATCTTGGCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTACTCGTTACTGAAAGGGTTTGGCAGTGAAAGAACATCTTGGCAA  500

seq1  TCAAGGGCCAATGAATACCACAAAATTCACACCATGAAACAAACTTCACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGGCCAATGAATACCACAAAATTCACACCATGAAACAAACTTCACA  550

seq1  CAGAGATTTGTTGTTTGTATGGGGTGGTGGTGGCAGGGTGTGTGTG  596
      ||||||| |||||||||||| |||||||||||||||||||||||||
seq2  CAGAGATGTGTTGTTTGTAT-GGGTGGTGGTGGCAGGGTGTGTGTG  595