BAC Information

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BAC

Clone NameB6Ng01-083H02
Chromosome6 (Build37)
Map Location 111,774,716 - 111,775,874
singlet/doubletsinglet
Overlap genenone
Upstream geneGrm7
Downstream gene1700054K19Rik, Lmcd1, D630042P16Rik, LOC619975, Cav3, Oxtr, LOC434076, EG434077, Rad18, Srgap3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-083H02.bB6Ng01-083H02.g
ACCDH897704DH897705
length1,1731,165
definitionDH897704|Mus musculus domesticus DNA, BAC clone: B6Ng01-083H02, 5' end.DH897705|Mus musculus domesticus DNA, BAC clone: B6Ng01-083H02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgctttcctcacgattggtggttgtcagggagtgtcttggaagt
gagtgttaggtgtaggcttgttagtgagtaacctggaaactaggtgcgta
gacttgttggttaacttgagttcaaggtgaggtcaggttctctaagatgg
agcctgaacccaagatggagttgtttgggtctctcaggctcacatttgcc
aaggcccaccctgcagtgatctgggccctcctacatcaattatcaactaa
agtaatactccaaagccatgcctctgctccagtctgatagagatgatttc
accagcacattctatgtggcttcaaccttcggcatatatcttgcttcctg
gatctgccaagtaaacaacttccatttttccagattagcgttttatcttg
tagtcagaactatctgaacaacaagtaattgaaatgcaaaatttaaaata
ctaaagttgaaaaaaaataactttggctaataatggaaaaactctagagc
aactggtgttatgacttcatatatcttaggggtcaagttatgtcatttga
gccaattttgtttttaatccttgatttttcttctgtggaacccttagtct
tatgttaatagtggttcaatagtctgaactgaatgtatccctttccaaat
gtgtctttcaaaagtattggcatcaaatgtaattttatattgcttggtat
tatctgatcaagagagaaattatgacacagggtctggtcccatttctggc
tacttcccttgatttgtgtctagaacttgccctacccagattctgagtaa
gagatggttactcagaagacaaccactgtttcctccatgattaaaataaa
tacagttgatttgatagttaggatgtaccccttgcacccagtaaatggag
attatagaaagaagcagaaaattcaagataagcagataaactattcttcc
tggtctttttcagaatttttgggttgcctcttgggcagatcttgatgagt
tctgccattgcataatgatggtgggtgaatttgtcaggacgaactgtatc
agggtggtggatcaagcataacttccctaacacacgcctgcatgaattgt
taggtagtcaatatcattgccatgtccttgaaaagctttctggtaaatag
caggatcagctatctatattgtg
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatgaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatggatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgccagggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccag
tggagggagctagagaaagtacccaaggagctaagggattctgcaaccct
ataggtggacacatatgactatcagtactcggagctctggactctagctg
caatatatcaaagatggctagtcggcatcactggagagggcctcgcattg
gacttgccaacttttatgcccagatcgggtaactcaaggcctaatagggt
agttgcgtggtctac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_111774716_111775874
seq2: B6Ng01-083H02.b_44_1216 (reverse)

seq1  CACAATATAGATA-CTGGTACTGCTATGTACAAG-AAGCTCT--CAGGGC  46
      ||||||||||||| ||| | ||||||| ||| || ||||| |   ||| |
seq2  CACAATATAGATAGCTGATCCTGCTATTTACCAGAAAGCTTTTCAAGGAC  50

seq1  ATGGGCATGAATATTGACTACCTAACAATTCATGCAGGCGTGTGTAAGGG  96
      ||||  ||| ||||||||||||||||||||||||||||||||||| ||||
seq2  ATGGCAATG-ATATTGACTACCTAACAATTCATGCAGGCGTGTGTTAGGG  99

seq1  AAGTTATGCTTGATCACCAACCCTG-TACAGTCCATCCTGAC-AATTCA-  143
      |||||||||||||||  | |||||| |||||| | ||||||| |||||| 
seq2  AAGTTATGCTTGATCCACCACCCTGATACAGTTCGTCCTGACAAATTCAC  149

seq1  CCACAATCACTATGCAATGGCAGAACTCATC-AGATCTGCCCAGGA-GCA  191
      |||| |||| ||||||||||||||||||||| ||||||||||| || |||
seq2  CCACCATCATTATGCAATGGCAGAACTCATCAAGATCTGCCCAAGAGGCA  199

seq1  ACC--AAAGATCTG-GAAAGACCAGGAAG-ATAGTTTATCTGCTTATCTT  237
      |||  |||  ||||  ||||||||||||| ||||||||||||||||||||
seq2  ACCCAAAAATTCTGAAAAAGACCAGGAAGAATAGTTTATCTGCTTATCTT  249

seq1  G-ATTTTCTGCTTCTTTCTATAATCTCCATTTACTGGGTGCAAGGGTTAC  286
      | |||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GAATTTTCTGCTTCTTTCTATAATCTCCATTTACTGGGTGCAAGGGGTAC  299

seq1  ATCCTAACTATC-AATCAACTGTATTTATTTTAATCATGGAGGAAACAGT  335
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  ATCCTAACTATCAAATCAACTGTATTTATTTTAATCATGGAGGAAACAGT  349

seq1  GGTTGTCTTCTGAGTAACCATCTCTTACTCAGAATCTGGGTAGGGCAAGT  385
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTCTTCTGAGTAACCATCTCTTACTCAGAATCTGGGTAGGGCAAGT  399

seq1  TCTAGACACAAATCAAGGGAAGTAGCCAGAAATGGGACCAGACCCTGTGT  435
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGACACAAATCAAGGGAAGTAGCCAGAAATGGGACCAGACCCTGTGT  449

seq1  CATAATTTCTCTCTTGATCAGATAATACCAAGCAATATAAAATTACATTT  485
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATTTCTCTCTTGATCAGATAATACCAAGCAATATAAAATTACATTT  499

seq1  GATGCCAATACTTTTGAAAGACACATTTGGAAAGGGATACATTCAGTTCA  535
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCCAATACTTTTGAAAGACACATTTGGAAAGGGATACATTCAGTTCA  549

seq1  GACTATTGAACCACTATTAACATAAGACTAAGGGTTCCACAGAAGAAAAA  585
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTATTGAACCACTATTAACATAAGACTAAGGGTTCCACAGAAGAAAAA  599

seq1  TCAAGGATTAAAAACAAAATTGGCTCAAATGACATAACTTGACCCCTAAG  635
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGATTAAAAACAAAATTGGCTCAAATGACATAACTTGACCCCTAAG  649

seq1  ATATATGAAGTCATAACACCAGTTGCTCTAGAGTTTTTCCATTATTAGCC  685
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATGAAGTCATAACACCAGTTGCTCTAGAGTTTTTCCATTATTAGCC  699

seq1  AAAGTTATTTTTTTTCAACTTTAGTATTTTAAATTTTGCATTTCAATTAC  735
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTATTTTTTTTCAACTTTAGTATTTTAAATTTTGCATTTCAATTAC  749

seq1  TTGTTGTTCAGATAGTTCTGACTACAAGATAAAACGCTAATCTGGAAAAA  785
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGTTCAGATAGTTCTGACTACAAGATAAAACGCTAATCTGGAAAAA  799

seq1  TGGAAGTTGTTTACTTGGCAGATCCAGGAAGCAAGATATATGCCGAAGGT  835
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGTTGTTTACTTGGCAGATCCAGGAAGCAAGATATATGCCGAAGGT  849

seq1  TGAAGCCACATAGAATGTGCTGGTGAAATCATCTCTATCAGACTGGAGCA  885
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCCACATAGAATGTGCTGGTGAAATCATCTCTATCAGACTGGAGCA  899

seq1  GAGGCATGGCTTTGGAGTATTACTTTAGTTGATAATTGATGTAGGAGGGC  935
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCATGGCTTTGGAGTATTACTTTAGTTGATAATTGATGTAGGAGGGC  949

seq1  CCAGATCACTGCAGGGTGGGCCTTGGCAAATGTGAGCCTGAGAGACCCAA  985
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATCACTGCAGGGTGGGCCTTGGCAAATGTGAGCCTGAGAGACCCAA  999

seq1  ACAACTCCATCTTGGGTTCAGGCTCCATCTTAGAGAACCTGACCTCACCT  1035
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTCCATCTTGGGTTCAGGCTCCATCTTAGAGAACCTGACCTCACCT  1049

seq1  TGAACTCAAGTTAACCAACAAGTCTACGCACCTAGTTTCCAGGTTACTCA  1085
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTCAAGTTAACCAACAAGTCTACGCACCTAGTTTCCAGGTTACTCA  1099

seq1  CTAACAAGCCTACACCTAACACTCACTTCCAAGACACTCCCTGACAACCA  1135
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACAAGCCTACACCTAACACTCACTTCCAAGACACTCCCTGACAACCA  1149

seq1  CCAATCGTGAGGAAAGCAGAATTC  1159
      ||||||||||||||||||||||||
seq2  CCAATCGTGAGGAAAGCAGAATTC  1173