BAC Information

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BAC

Clone NameB6Ng01-084B03
Chromosome6 (Build37)
Map Location 18,835,451 - 18,835,968
singlet/doubletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-084B03.bB6Ng01-084B03.g
ACCDH898144DH898145
length9931,061
definitionDH898144|Mus musculus domesticus DNA, BAC clone: B6Ng01-084B03, 5' end.DH898145|Mus musculus domesticus DNA, BAC clone: B6Ng01-084B03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagttctgagccccattttttaatggggttgttcgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagcccc
ctatctgatttaggataggtaaaaatcctttcccaatctgttggtggtct
ttttgtcttattgatggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttatcaattctcaatcttacagcacatgccattgctgtt
ctgttcaggaatttttccctgtgcccatatcttcaaggcttttccccact
ttctcctctataactttcagtgtctctggttttatgtgaagttctttgat
ccacttagatttgaccttagtacaaggagataagtatggatcgattcgca
ttcttctacacgataacaaccagttgtgccagcaccaattattgaaaatg
ctgtctttcttccactggatggttttagctcccttgtcgaagatcaagtg
accataggtgggtgggttcatttctgggtcttcaattctattccattggt
ctacttgtctgtttctatgccagtaccatgcagtttttatcacaattgct
ctatggtaaagctttaggtcaggcatggtgattccaccagaggttctttt
atccttgagaagactttttgctatcctaggttttttgttattccagatga
atttgcaaattgctccttctaattcgttgaagaattgagttggaattttg
atggggattgcattgaatctgtagattgcttttggcaagatagccatttt
tacaatgttgatcctgccaatccatgagcatgggagatctttccatcttc
tgagatcttctttaatttctttcttcagagatttgaagtttttatcatac
agatctttcacctccttagttagagttaagccaagatattttatactatt
tgtgactattgagaaggtgtgtttccctaatttctttctcagc

gaattctctgcttagttctgtaccccatttgaaaattggattatgtgggt
tgttagcatctaacttattgtcttttttataaattttggataatacccca
ttgtctgatgcagggttgatgaagatcctttccaaatctgtagactgcag
ttttgtcctaatgacagtgtcccttctttatggaagcttttcagtttcat
gaggttccatttatcaattgctgatcttagagcttagatctttggttttc
tgttcaaaaaattttctcctgtaccaacaagtttaaggctatttcccact
tcctgttcttttagctttggtgtatctggttttacattaaggtccttgat
tatcttagacttgagttttgtgcagggttgatagatctgactctatttgc
attcttctatgtgcagaaatccagttaggccagtgccatgttctaaaggt
gctttctttttttccattgtatggttttgccctctttgcaaaaatcaaat
gtccataggtgtgtgggtttgttttaataccttcagttggattccactta
tcaatttgtctgttgctataccaataccatgcagtttttgctattattgc
tctgtagtacatcttgagttcagggttggtgatatgtccagaagtggttt
tattatttaggattgtttaattatcctctgtttactgttatttgttttgc
ttatgaagttgagagctgttcatttaatgtctgaaatgaattgtgttgaa
attttgatgagaattgcattgaatctgtaaggtgctttgggtaagatggc
cactttcactatgttagtctacttttccatggacataggagatctttcca
tattcttatatcttcctcaatttttcatcagagttgaagttctgttctgt
aggcctttcacttgtttgcttagagttacaccaagatatttatattattc
atggctattgtaaaagtgttgtttctctagtttctttctccgacatttat
tgttggataaaggagtgccactggttttttttgtttctgtggtgtggtag
taatttgtata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835451_18835968
seq2: B6Ng01-084B03.b_51_568 (reverse)

seq1  AACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCAT  50
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCACCCACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCAT  50

seq1  CCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGT  100
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CCAGTGGAAGAAAGACAGCATTTTCAATAATTGGTGCTGGCACAACTGGT  100

seq1  TGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCTCCATGTACT  150
      ||||||| |||||||||||| |||||||||||||||||||||| ||||||
seq2  TGTTATCGTGTAGAAGAATGCGAATCGATCCATACTTATCTCCTTGTACT  150

seq1  AAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACT  200
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AAGGTCAAATCTAAGTGGATCAAAGAACTTCACATAAAACCAGAGACACT  200

seq1  GAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCAGAG  250
      |||| |||||||||||||||||||||||||||||||||||||||||| | 
seq2  GAAAGTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACA-  249

seq1  GGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTGAGGTAGAGA  299
      ||||||| ||||||||||||||||||||||| |||||||| || | ||||
seq2  GGGAAAAATTCCTGAACAGAACAGCAATGGCATGTGCTGTAAGATTGAGA  299

seq1  ATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGA  349
      || || ||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGA  349

seq1  CACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTA  399
      |||| |||||||||||||||||||||||||||||||||||||||| ||||
seq2  CACCATCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATTTTTA  399

seq1  CCTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTC  449
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CCTATCCTAAATCAGATAGGGGGCTAATATCCAACATATATAAAGAACTC  449

seq1  AAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAAATGGGGCTC  499
      ||||||||||||||||||||||| || ||||||||||| |||||||||||
seq2  AAGAAGGTGGACTTCAGAAAATCGAACAACCCCATTAAAAAATGGGGCTC  499

seq1  AGAACTGAACAAAGAATTC  518
      |||||||||||||||||||
seq2  AGAACTGAACAAAGAATTC  518


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