BAC Information

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BAC

Clone NameB6Ng01-086D24
Chromosome6 (Build37)
Map Location 7,143,830 - 7,145,008
singlet/doubletsinglet
Overlap geneEG667500
Upstream geneSlc25a13, EG667462, EG667468, LOC667471, LOC100040096, Shfm1, LOC545826, Dlx6as, Dlx5, Acn9
Downstream geneTac1, LOC667511, Asns, EG667529, C1galt1, LOC100040661, Col28a1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-086D24.bB6Ng01-086D24.g
ACCDH899699DH899700
length1,1811,163
definitionDH899699|Mus musculus domesticus DNA, BAC clone: B6Ng01-086D24, 5' end.DH899700|Mus musculus domesticus DNA, BAC clone: B6Ng01-086D24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcacaagttgtttctctgtaactgtctcttttaagagttctttc
atcctgggtgaggtaacccaatcacaaaggaactcacacaatatgtactc
actgataagtggatattagcccagaaacttagaataaccaagatataata
gttgattattttgctttcttagctgctcattttgctgctttaacttagaa
atttcacttcccatccttttatattcacttttcaaaataagagcttttgt
gctttgtacaattccactgccacctccacaggttagaggtttactcagaa
gctgagagtcttgttctggtatcattgaggtatcctgggcctgtgatgtc
ctctaagattttctctcagtagccttatcatttcttcttgatgctcaaca
gtggcttttagagaaagaattttctctaaaagattttttttactgtaaga
acaaagccctcacttctgtacacataaaccaaagagattgaaaagcctct
tactgcaaaccagagatgttccttggagttccacagagtcctcaagagac
ttaggtatgtgttaagctccattgcaaggataaaggaagagcaacatgag
ttcatcaataaatttgaaatggcttttattcaggaagtggaaaagcagaa
tgaactgcaaattaaaatccacagcctttcgcagacttaaagtattccat
ccagagatttacagatcaaattgagccaggagatggacctccatattgag
gaaatgctcaaagatttttcagaaaatgacttcctcaccataaaaactga
agtccaacaagtattaagttataggaaagaaataacagagtttttgggaa
aatggctaaacactctttttgataaagaaaatcttaagagtaccatccag
aaagaaaccaaaagcattgggcttgtgaataacttttatcacagcagaat
cactgccatgataaatgaatcaacggaaagaagttctgccagatccaaag
aattggaaaactacctgaagtcactgaaagaaacactgaacaactattct
gaagtctacagacactgaccgccttcaagtctgttgtgcatctcaatctg
ctgtgcagctttccacacggggaacagtgaagcgtcctcatgttgcaatc
aggaagctgacactggacctcaaagaacaaa
gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaattgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggttgggagactattaataactgcttctatttct
ttaggtgatatgggactgtttagatggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taggattttgtccctgtgccctttagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga
atagttcttcttgtttccacttggttgatttcaccccctgagtttgatta
tttcctgccgtctactcctcttgggtgatttgctttccttttttttctag
ggcttttagatgtgttgtcaagctgctagtatgtgctgtctcccgttttc
ttcttggaggcactcagcgctatgagtttccctcttagaaatgctttcat
tgtgtcccataggtttgggtacgttgtgcctcattttcattaactctaaa
aagtctttatatttctttctttatttctttcttgacaaggtatatcatgt
gaaaagagtgttatctgacttcaacgtgtacggtgggctttccaattatt
atatactttgtgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_7143830_7145008
seq2: B6Ng01-086D24.b_47_1227

seq1  GAATTCTCACAAGTTGTTTCTCTGTAACTGTCTCTTTTAAGAGTTCTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACAAGTTGTTTCTCTGTAACTGTCTCTTTTAAGAGTTCTTTC  50

seq1  ATCCTGGGTGAGGTAACCCAATCACAAAGGAACTCACACAATATGTACTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGGGTGAGGTAACCCAATCACAAAGGAACTCACACAATATGTACTC  100

seq1  ACTGATAAGTGGATATTAGCCCAGAAACTTAGAATAACCAAGATATAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATAAGTGGATATTAGCCCAGAAACTTAGAATAACCAAGATATAATA  150

seq1  GTTGATTATTTTGCTTTCTTAGCTGCTCATTTTGCTGCTTTAACTTAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGATTATTTTGCTTTCTTAGCTGCTCATTTTGCTGCTTTAACTTAGAA  200

seq1  ATTTCACTTCCCATCCTTTTATATTCACTTTTCAAAATAAGAGCTTTTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCACTTCCCATCCTTTTATATTCACTTTTCAAAATAAGAGCTTTTGT  250

seq1  GCTTTGTACAATTCCACTGCCACCTCCACAGGTTAGAGGTTTACTCAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGTACAATTCCACTGCCACCTCCACAGGTTAGAGGTTTACTCAGAA  300

seq1  GCTGAGAGTCTTGTTCTGGTATCATTGAGGTATCCTGGGCCTGTGATGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGAGTCTTGTTCTGGTATCATTGAGGTATCCTGGGCCTGTGATGTC  350

seq1  CTCTAAGATTTTCTCTCAGTAGCCTTATCATTTCTTCTTGATGCTCAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAAGATTTTCTCTCAGTAGCCTTATCATTTCTTCTTGATGCTCAACA  400

seq1  GTGGCTTTTAGAGAAAGAATTTTCTCTAAAAGATTTTTTTTACTGTAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTTTTAGAGAAAGAATTTTCTCTAAAAGATTTTTTTTACTGTAAGA  450

seq1  ACAAAGCCCTCACTTCTGTACACATAAACCAAAGAGATTGAAAAGCCTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGCCCTCACTTCTGTACACATAAACCAAAGAGATTGAAAAGCCTCT  500

seq1  TACTGCAAACCAGAGATGTTCCTTGGAGTTCCACAGAGTCCTCAAGAGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCAAACCAGAGATGTTCCTTGGAGTTCCACAGAGTCCTCAAGAGAC  550

seq1  TTAGGTATGTGTTAAGCTCCATTGCAAGGATAAAGGAAGAGCAACATGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTATGTGTTAAGCTCCATTGCAAGGATAAAGGAAGAGCAACATGAG  600

seq1  TTCATCAATAAATTTGAAATGGCTTTTATTCAGGAAGTGGAAAAGCAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCAATAAATTTGAAATGGCTTTTATTCAGGAAGTGGAAAAGCAGAA  650

seq1  TGAACTGCAAATTAAAATCCACAGCCTTTCGCAGACTTAAAGTATTCCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTGCAAATTAAAATCCACAGCCTTTCGCAGACTTAAAGTATTCCAT  700

seq1  CCAGAGATTTACAGATCAAATTGAGCCAGGAGATGGACCTCCATATTGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGATTTACAGATCAAATTGAGCCAGGAGATGGACCTCCATATTGAG  750

seq1  GAAATGCTCAAAGATTTTTCAGAAAATGACTTCCTCACCATAAAAACTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGCTCAAAGATTTTTCAGAAAATGACTTCCTCACCATAAAAACTGA  800

seq1  AGTCCAACAAGTATTAAGTTATAGGAAAGAAATAACAGAGTTTTTGGGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCAACAAGTATTAAGTTATAGGAAAGAAATAACAGAGTTTTTGGGAA  850

seq1  AATGGCTAAACACTCTTTTTGATAAAGAAAATCTTAAGAGTACCATCCAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCTAAACACTCTTTTTGATAAAGAAAATCTTAAGAGTACCATCCAG  900

seq1  AAAGAAACCAAAAGCATTGGGCTTGTGAATAACTTTTATCACAGCAGAAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAACCAAAAGCATTGGGCTTGTGAATAACTTTTATCACAGCAGAAT  950

seq1  CACTGCCATGATAAATGAATCAACGGAAAGAAGTTCTGCCAGATCCAAAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCCATGATAAATGAATCAACGGAAAGAAGTTCTGCCAGATCCAAAG  1000

seq1  AATTGGAAAACTACCTGAAGTCACTGAAAGAAACAACTGAACAACTA-TC  1049
      |||||||||||||||||||||||||||||||||| |||||||||||| ||
seq2  AATTGGAAAACTACCTGAAGTCACTGAAAGAAAC-ACTGAACAACTATTC  1049

seq1  TGAAGTCTACCAGACACTGACCGCCTTCCAGTCTGTTGTGCATCTCCATC  1099
      ||||||||| |||||||||||||||||| ||||||||||||||||| || 
seq2  TGAAGTCTA-CAGACACTGACCGCCTTCAAGTCTGTTGTGCATCTCAAT-  1097

seq1  CTGCTGTGCAGCCTTCCACACGGG--ACAGTG-AGCGTCCTCATGTTGC-  1145
      |||||||||||| |||||||||||  |||||| |||||||||||||||| 
seq2  CTGCTGTGCAGCTTTCCACACGGGGAACAGTGAAGCGTCCTCATGTTGCA  1147

seq1  ATCAGG-AGCTGAACAACTGACCTCAAAGAACAAA  1179
      |||||| ||||| |||   ||||||||||||||||
seq2  ATCAGGAAGCTG-ACACTGGACCTCAAAGAACAAA  1181