BAC Information

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BAC

Clone NameB6Ng01-087I16
Chromosome6 (Build37)
Map Location 125,956,541 - 125,990,998
singlet/doubletdoublet
Overlap geneTmem16b
Upstream geneZfp384, Ing4, Acrbp, Gpr92, Chd4, Nol1, A930037G23Rik, Gapdh, Ncapd2, Mrpl51, Vamp1, Tapbpl, Cd27, 4930417O13Rik, Tuba3a, Ltbr, Scnn1a, Tnfrsf1a, Plekhg6, Cd9, Vwf
Downstream geneNtf3, LOC100043565, LOC667427, LOC100043567, Kcna5, Kcna1, Kcna6, LOC667463, Ndufa9, Akap3, Dyrk4, Rad51ap1, D6Wsu163e, LOC667473, LOC624256, Fgf6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-087I16.bB6Ng01-087I16.g
ACCDH900638DH900639
length1,1441,134
definitionDH900638|Mus musculus domesticus DNA, BAC clone: B6Ng01-087I16, 5' end.DH900639|Mus musculus domesticus DNA, BAC clone: B6Ng01-087I16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(125,956,541 - 125,957,708)(125,989,845 - 125,990,998)
sequence
gaattcactttcctgacaattaaccttgtcctataatgacattaacccgt
cgcctctcagcgatccggttctaacacacaaattcagtgagcagtagagc
acattcaaaccgcagcacagatggtctttgctttctcttggtgagcacga
agtctatgggtggacttcgttccatagataaatgcttgttgaatgactgg
cagatgaagtgagggagtgggtagtgaacggtgaagattgacaggtcaca
tgtctgtcacacatgctgctgctttccccagcatcagaacccagggctga
agacatggcctgcacccctcccttcccattgctctgtctattctcagcca
ccaacactcccaagtccttgtgtttgtcaccagacactcttagaagaaaa
ggatggtggagcatatctttaaaatgagggcttgagaaatgacagcactg
aattagcaccacgtgcttttccaagaccattcagcagaacaaacggacca
cataccctcccttccccgtcttgctcaccactggttcacaaaaaggatga
ccctgaaggaccaggtttccttctcgtttttcttaagataaaaatgtaga
ggaaaaaaaatctagcagtagagattaatgcaaagactaactagacaaat
gtagcaaggagcaacgaagtcaaagtcttcgtggcaatgcttaagatcga
gttttccagttctcctgtgacatttgaaagcatgagataaaacgcgtttg
atgtcctgagtttattatagtctaactgaaccactgcatttccagtcaag
ctccctggaagagcattgtgaacctcagtgggacaatggtagcacagagt
cccaaacacaacctcaccagacaacgcagttcccagctgcttctgttatt
tctgaaagtcctttcttggtcttcctcagtctcacctccatttttctctc
agagatctaactcgtacttatcagacatttcttgcaaacttaccagacag
gacaggtcattgcctgttttcttatatcctgtttttactacaatgtaatg
gttttttaaatattttgtataaatggtcatggaataatgcatgaattata
tgatgaatctgatgtgtcatcctgactctccattccctcccctt
gaattctaagaaggacattgtgtgccttaccattactacagaagaaggga
tttagaaactcaagaggcccaatcctagacaccatctcacattcttagag
tttccggaaacatcatagcccttttctgctctcctctggtgcaggccctt
ccttgtatctgcttatcaggcattaactagtcagattgccctgtgtggac
ctggagatgggtcaagacgatatagtgttgcaactagtctctgggctgca
gaaggggctgagaaatataagaagcatgattgacagtggtgaacatcaat
ggcttttccaatgactggcctttctatccaactctttatgaaaatctccc
catagagtcccagagagcaactaccaattgactatgttagcatttcaata
tgtacctctcactactctatagtgaatataaaatacagctcctactcttc
cttataatgccccttacctgacctgactgctcccttttgccttaataaag
gaaaagcaaagttatcacctcctgttaacattgttgacagtctttctgag
ccagcccatggataagctctaagtgcacctacacttgctatgtcctgcac
ttcctgttttctctgttctccctagcatttttccattgcattcaccatta
tctaaaatgactaaacaacagttggttcgtcacctgtccccagacaggaa
cgttctctcttctattgcctgctttgtgagaacagagcttgagaaaggaa
gagagggagggaagcggaaaaacaaaaaaggaataggagagagaggagag
ggaggggaggagaagaaacacagcatcaaagacaagagatacatttattt
ttttaaaaaaaagactttccatttattttattttaaaccagaacttgcat
aaaacggtggtgagttgcattatatgcatccttgtcataggagctgcaga
caaacctggacaggacctttcttccttaccaccaggtcagtggccacaga
aatcatcctgtacttcatttgcatctgcccagctgtgtgcccatcacaag
tgtctctgaaagtaatcagggtgacagtggaagggggtgtgatcagtaga
tgtgcctagatggatggaccctactgactctttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_125956541_125957708
seq2: B6Ng01-087I16.b_48_1191

seq1  GAATTCACTTTCCTGACAATTAACCTTGTCCTATAATGACATTAACCCGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTCCTGACAATTAACCTTGTCCTATAATGACATTAACCCGT  50

seq1  CGCCTCTCAGCGATCCGGTTCTAACACACAAATTCAGTGAGCAGTAGAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCTCTCAGCGATCCGGTTCTAACACACAAATTCAGTGAGCAGTAGAGC  100

seq1  ACATTCAAACCGCAGCACAGATGGTCTTTGCTTTCTCTTGGTGAGCACGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCAAACCGCAGCACAGATGGTCTTTGCTTTCTCTTGGTGAGCACGA  150

seq1  AGTCTATGGGTGGACTTCGTTCCATAGATAAATGCTTGTTGAATGACTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTATGGGTGGACTTCGTTCCATAGATAAATGCTTGTTGAATGACTGG  200

seq1  CAGATGAAGTGAGGGAGTGGGTAGTGAACGGTGAAGATTGACAGGTCACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGAAGTGAGGGAGTGGGTAGTGAACGGTGAAGATTGACAGGTCACA  250

seq1  TGTCTGTCACACATGCTGCTGCTTTCCCCAGCATCAGAACCCAGGGCTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTCACACATGCTGCTGCTTTCCCCAGCATCAGAACCCAGGGCTGA  300

seq1  AGACATGGCCTGCACCCCTCCCTTCCCATTGCTCTGTCTATTCTCAGCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATGGCCTGCACCCCTCCCTTCCCATTGCTCTGTCTATTCTCAGCCA  350

seq1  CCAACACTCCCAAGTCCTTGTGTTTGTCACCAGACACTCTTAGAAGAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACACTCCCAAGTCCTTGTGTTTGTCACCAGACACTCTTAGAAGAAAA  400

seq1  GGATGGTGGAGCATATCTTTAAAATGAGGGCTTGAGAAATGACAGCACTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGTGGAGCATATCTTTAAAATGAGGGCTTGAGAAATGACAGCACTG  450

seq1  AATTAGCACCACGTGCTTTTCCAAGACCATTCAGCAGAACAAACGGACCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGCACCACGTGCTTTTCCAAGACCATTCAGCAGAACAAACGGACCA  500

seq1  CATACCCTCCCTTCCCCGTCTTGCTCACCACTGGTTCACAAAAAGGATGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACCCTCCCTTCCCCGTCTTGCTCACCACTGGTTCACAAAAAGGATGA  550

seq1  CCCTGAAGGACCAGGTTTCCTTCTCGTTTTTCTTAAGATAAAAATGTAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGAAGGACCAGGTTTCCTTCTCGTTTTTCTTAAGATAAAAATGTAGA  600

seq1  GGAAAAAAAATCTAGCAGTAGAGATTAATGCAAAGACTAACTAGACAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAAAAATCTAGCAGTAGAGATTAATGCAAAGACTAACTAGACAAAT  650

seq1  GTAGCAAGGAGCAACGAAGTCAAAGTCTTCGTGGCAATGCTTAAGATCGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCAAGGAGCAACGAAGTCAAAGTCTTCGTGGCAATGCTTAAGATCGA  700

seq1  GTTTTCCAGTTCTCCTGTGACATTTGAAAGCATGAGATAAAACGCGTTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCCAGTTCTCCTGTGACATTTGAAAGCATGAGATAAAACGCGTTTG  750

seq1  ATGTCCTGAGTTTATTATAGTCTAACTGAACCACTGCATTTCCAGTCAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCTGAGTTTATTATAGTCTAACTGAACCACTGCATTTCCAGTCAAG  800

seq1  CTCCCTGGAAGAGCATTGTGAACCTCAGTGGGACAATGGTAGCACAGAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTGGAAGAGCATTGTGAACCTCAGTGGGACAATGGTAGCACAGAGT  850

seq1  CCCAAACACAACCTCACCAGACAACGCAGTTCCCAGCTGCTTCTGTTATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAACACAACCTCACCAGACAACGCAGTTCCCAGCTGCTTCTGTTATT  900

seq1  TCTGAGAGTCCTTCCTTGGTCTTCCTCAGTTCTCACCTCCATTTTTCTCT  950
      ||||| ||||||| ||||||||||||||| ||||||||||||||||||||
seq2  TCTGAAAGTCCTTTCTTGGTCTTCCTCAG-TCTCACCTCCATTTTTCTCT  949

seq1  CAGAGGATCTAACTCGTACTTATCAGACATTTCTTGCAAACTTACCAGAC  1000
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGA-GATCTAACTCGTACTTATCAGACATTTCTTGCAAACTTACCAGAC  998

seq1  AGGACAGGTCATTTGCCTGTTTTCTTTTATATCCTTGTTTTTACTACCAA  1050
      ||||||||||| ||||||||||||  |||||||| ||||||||||| |||
seq2  AGGACAGGTCA-TTGCCTGTTTTC--TTATATCC-TGTTTTTACTA-CAA  1043

seq1  TGTTAATGGTTTTTTTAAAATTATTTTTGTTAATTAAATTGGTTCATGGA  1100
      || |||||||||||| || |    ||||||    |||||  | |||||||
seq2  TG-TAATGGTTTTTTAAATA----TTTTGT---ATAAAT--GGTCATGGA  1083

seq1  TAATTGCATGTATTTATATGATGTATTCTGATGTTGTCATCCCTGTCTTC  1150
        | |||||| | |||||||||| | ||||||| |||||| ||||    |
seq2  ATAATGCATG-AATTATATGATG-AATCTGATG-TGTCAT-CCTG---AC  1126

seq1  TTTCATTTCCCTCCCCTT  1168
      | ||  ||||||||||||
seq2  TCTCCATTCCCTCCCCTT  1144

seq1: chr6_125989845_125990998
seq2: B6Ng01-087I16.g_68_1201 (reverse)

seq1  GAAAGAAGTTCAGTGAGGGTCCCATCCATCCTAGCACCCATCTAACTGAT  50
      ||||||   ||||| ||||| |||||||||   |||  ||||| ||||||
seq2  GAAAGA--GTCAGT-AGGGT-CCATCCATCTAGGCA--CATCT-ACTGAT  43

seq1  CACACCCCCTTCCTACTGTCACCCTGGAATAACCTCTCAGAGACACTTGT  100
      ||||||||||||| ||||||||||||  || | || ||||||||||||||
seq2  CACACCCCCTTCC-ACTGTCACCCTG--ATTA-CTTTCAGAGACACTTGT  89

seq1  GAATGGGGCCACAACAAGGCTGGGCAGATGCAAATGAAGTTACAGGATTG  150
      | |||||  ||||     ||||||||||||||||||||| ||||||| ||
seq2  G-ATGGGCACACA-----GCTGGGCAGATGCAAATGAAG-TACAGGA-TG  131

seq1  ATTTCTGTGGCCACTGGACCTGGTGGTAAGGAAGAAAGGTCCTGTCCAGG  200
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  ATTTCTGTGGCCACT-GACCTGGTGGTAAGGAAGAAAGGTCCTGTCCAGG  180

seq1  TTTGTCTGCAGCTCCTATGACAAGGATGCATATAATGCAACTCACCACCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTGCAGCTCCTATGACAAGGATGCATATAATGCAACTCACCACCG  230

seq1  TTTTATGCAAGTTCTGGTTTAAAATAAAATAAATGGAAAGTCTTTTTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATGCAAGTTCTGGTTTAAAATAAAATAAATGGAAAGTCTTTTTTTT  280

seq1  AAAAAAATAAATGTATCTCTTGTCTTTGATGCTGTGTTTCTTCTCCTCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAATAAATGTATCTCTTGTCTTTGATGCTGTGTTTCTTCTCCTCCC  330

seq1  CTCCCTCTCCTCTCTCTCCTATTCCTTTTTTGTTTTTCCGCTTCCCTCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTCTCCTCTCTCTCCTATTCCTTTTTTGTTTTTCCGCTTCCCTCCC  380

seq1  TCTCTTCCTTTCTCAAGCTCTGTTCTCACAAAGCAGGCAATAGAAGAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTCCTTTCTCAAGCTCTGTTCTCACAAAGCAGGCAATAGAAGAGAG  430

seq1  AACGTTCCTGTCTGGGGACAGGTGACGAACCAACTGTTGTTTAGTCATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTTCCTGTCTGGGGACAGGTGACGAACCAACTGTTGTTTAGTCATTT  480

seq1  TAGATAATGGTGAATGCAATGGAAAAATGCTAGGGAGAACAGAGAAAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATAATGGTGAATGCAATGGAAAAATGCTAGGGAGAACAGAGAAAACA  530

seq1  GGAAGTGCAGGACATAGCAAGTGTAGGTGCACTTAGAGCTTATCCATGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTGCAGGACATAGCAAGTGTAGGTGCACTTAGAGCTTATCCATGGG  580

seq1  CTGGCTCAGAAAGACTGTCAACAATGTTAACAGGAGGTGATAACTTTGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTCAGAAAGACTGTCAACAATGTTAACAGGAGGTGATAACTTTGCT  630

seq1  TTTCCTTTATTAAGGCAAAAGGGAGCAGTCAGGTCAGGTAAGGGGCATTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTTATTAAGGCAAAAGGGAGCAGTCAGGTCAGGTAAGGGGCATTA  680

seq1  TAAGGAAGAGTAGGAGCTGTATTTTATATTCACTATAGAGTAGTGAGAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGAAGAGTAGGAGCTGTATTTTATATTCACTATAGAGTAGTGAGAGG  730

seq1  TACATATTGAAATGCTAACATAGTCAATTGGTAGTTGCTCTCTGGGACTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATATTGAAATGCTAACATAGTCAATTGGTAGTTGCTCTCTGGGACTC  780

seq1  TATGGGGAGATTTTCATAAAGAGTTGGATAGAAAGGCCAGTCATTGGAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGGGAGATTTTCATAAAGAGTTGGATAGAAAGGCCAGTCATTGGAAA  830

seq1  AGCCATTGATGTTCACCACTGTCAATCATGCTTCTTATATTTCTCAGCCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATTGATGTTCACCACTGTCAATCATGCTTCTTATATTTCTCAGCCC  880

seq1  CTTCTGCAGCCCAGAGACTAGTTGCAACACTATATCGTCTTGACCCATCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGCAGCCCAGAGACTAGTTGCAACACTATATCGTCTTGACCCATCT  930

seq1  CCAGGTCCACACAGGGCAATCTGACTAGTTAATGCCTGATAAGCAGATAC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTCCACACAGGGCAATCTGACTAGTTAATGCCTGATAAGCAGATAC  980

seq1  AAGGAAGGGCCTGCACCAGAGGAGAGCAGAAAAGGGCTATGATGTTTCCG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGGGCCTGCACCAGAGGAGAGCAGAAAAGGGCTATGATGTTTCCG  1030

seq1  GAAACTCTAAGAATGTGAGATGGTGTCTAGGATTGGGCCTCTTGAGTTTC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTCTAAGAATGTGAGATGGTGTCTAGGATTGGGCCTCTTGAGTTTC  1080

seq1  TAAATCCCTTCTTCTGTAGTAATGGTAAGGCACACAATGTCCTTCTTAGA  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCCCTTCTTCTGTAGTAATGGTAAGGCACACAATGTCCTTCTTAGA  1130

seq1  ATTC  1154
      ||||
seq2  ATTC  1134