BAC Information

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BAC

Clone NameB6Ng01-089N09
Chromosome6 (Build37)
Map Location 13,740,352 - 13,740,849
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667735, LOC384350, Tmem106b, Gm467, Gm725, 1700016P04Rik, LOC100040478, Tmem168, B630005N14Rik
Downstream geneGpr85, 2610001J05Rik, LOC100041043, LOC100040513, LOC667797, Ppp1r3a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-089N09.g
ACCDH902308
length588
definitionDH902308|Mus musculus domesticus DNA, BAC clone: B6Ng01-089N09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttaaaccctgaggcatgctttggagaaaagtgagcaagatgga
tgtttttttttttttttttttttgggggggggggttgatgactgagattc
cacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagcag
atgctggcgaggatgtggagaaagaggaacactcctccattgttggtggg
attgcaggcttgtacaaccactctggaaatcagtctggcggttcctcaga
aaattggacatagtactaccggaggatccagcaatacctctcctaggcat
atatccagaagaagccccaactggtaagaaggacacatgctccactatgt
tcatagcagccttatttataatagccagaaactggaattaacccagatgc
ccctcaatataggaatggatacagaaaatgtggtacatctacacaatgga
gtactactcagctattgaaagaatgaatttatgaaattcctagccaaatg
gatggacctggagagcatcatcctgagtgaggtaacacaatcacaaagga
actcacacaatatgtactcactgataagtggatactag
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_13740352_13740849
seq2: B6Ng01-089N09.g_160_656 (reverse)

seq1  CTAGTATCCACTTATCAGTGAGTACATATTGTGTGAGTTCCTTTGTGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTATCCACTTATCAGTGAGTACATATTGTGTGAGTTCCTTTGTGATT  50

seq1  GTGTTACCTCACTCAGGATGATGCTCTCCAGGTCCATCCATTTGGCTAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTACCTCACTCAGGATGATGCTCTCCAGGTCCATCCATTTGGCTAGG  100

seq1  AATTTCATAAATTCATTCTTTTTAATAGCTGAGTAGTACTCCATTGTGTA  150
      |||||||||||||||||| ||| |||||||||||||||||||||||||||
seq2  AATTTCATAAATTCATTC-TTTCAATAGCTGAGTAGTACTCCATTGTGTA  149

seq1  GATGTACCACATTTTCTGTATCCATTCCTCTGTTGAGGGGCATCTGGGTT  200
      ||||||||||||||||||||||||||||| | ||||||||||||||||||
seq2  GATGTACCACATTTTCTGTATCCATTCCTATATTGAGGGGCATCTGGGTT  199

seq1  CTTTCCAGTTTCTGGCTATTATAAATAAGGCTGCTATGAACATAGTGGAG  250
        ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCAGTTTCTGGCTATTATAAATAAGGCTGCTATGAACATAGTGGAG  249

seq1  CATGTGTCCTTCTTACCAGTTGGGGCTTCTTCTGGATATATGCCCAGGAG  300
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CATGTGTCCTTCTTACCAGTTGGGGCTTCTTCTGGATATATGCCTAGGAG  299

seq1  AGGTATTGCTGGATCCTCCGGTAGTACTATGTCCAATTTTCTGAGGAACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATTGCTGGATCCTCCGGTAGTACTATGTCCAATTTTCTGAGGAACC  349

seq1  GCCAGACTGATTTCCAGAGTGGTTGTACAAGCCTGCAATCCCACCAACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGACTGATTTCCAGAGTGGTTGTACAAGCCTGCAATCCCACCAACAA  399

seq1  TGGAGGAGTGTTCCTCTTTCTCCACATCCTCGCCAGCATCTGCTGTCACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGAGTGTTCCTCTTTCTCCACATCCTCGCCAGCATCTGCTGTCACC  449

seq1  TGAATTTTTGATCTTAGCCATTCTCACTGGTGTGAGGTGGAATCTCAG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTTTTGATCTTAGCCATTCTCACTGGTGTGAGGTGGAATCTCAG  497