BAC Information

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BAC

Clone NameB6Ng01-094J13
Chromosome6 (Build37)
Map Location 149,117,835 - 149,295,402
singlet/doubletdoublet
Overlap geneC730024G19Rik, 2810474O19Rik, LOC665426
Upstream geneMlstd1, Ergic2, Tmtc1, 1110033J19Rik, EG622319, LOC100042984, LOC665372, Ipo8, Caprin2, EG665395, Tera, LOC667138, D030011O10Rik, 4833442J19Rik
Downstream geneLOC622481, LOC665441, Bicd1, LOC667182, LOC100039850
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094J13.bB6Ng01-094J13.g
ACCDH905773DH905774
length960140
definitionDH905773|Mus musculus domesticus DNA, BAC clone: B6Ng01-094J13, 5' end.DH905774|Mus musculus domesticus DNA, BAC clone: B6Ng01-094J13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(149,117,835 - 149,118,671)(149,295,263 - 149,295,402)
sequence
gaattcttcaaagctcatgtaaaggtgcccaggagaaccaagtgtacaaa
gttgttttcttgttccttgcccatcaataatagtactcttttcctgagga
taaaatttagtacattcataaatgtttcaaaattacctctaattgtttgg
cacatggtccactaacaagtgcaaccacaccattgtcagatacctaaaca
aaagggaaaagaaatatatcttgtgatggagatgaaagaattttctaaag
tacattaatcatgaagaataactaccttccattcagcaaacatatatttt
agttatatattcttcccattaactaagagtgagttcaatgcccctaacaa
aggaccatactttttctgtttattgaaaagcacatccagaaagatatagg
aaaggaataagtgttgtattaatcttttacagaagttttataagggaaga
aatactttatctgactcattgacccagaacagcaagaaaaaccacaaatc
acattattccttatacacaaatacattgttctgagttaggggcatggaaa
ggttataagggagacatatatattgttctgaggcagggtcatggactggt
tggatatgaatgaaaaataaataatacagtgtgagatcaaagctatgtgt
tcaacttagcttttaaaagttgattacaagactgccatacccgggatcca
tcccataatcagcctccaaatgctgacagcattgcatacaccagcaagat
tttgctgaaaggaccctgatatagctgtctcttgtgagactatgccaggg
cctggcaaacacagaagtggatgcccacagtcagctattggatggaacac
agggccccatggaggagctagagaaagcacccaagagctaaagggtctgc
aaccctatagtggaacatatatgaactaaccagtacccccgagcctcgtg
tctctagctg
ttagaggccagagctagttccaggacagtcaagactacacacacacacac
acacacacacacacaaacacacaatcctgtcttgggaaagggagggggga
gagagagagagattgtgtgtgtgtgtgtgtgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_149117835_149118671
seq2: B6Ng01-094J13.b_46_883

seq1  GAATTCTTCAAAGCTCATGTAAAGGTG-GGAGGAGAACCAAGTGTACAAA  49
      |||||||||||||||||||||||||||   ||||||||||||||||||||
seq2  GAATTCTTCAAAGCTCATGTAAAGGTGCCCAGGAGAACCAAGTGTACAAA  50

seq1  GTTGTTTTCTTGTTCCTTGCCCATCAATAATAGTACTCTTTTCCTGAGGA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTTTCTTGTTCCTTGCCCATCAATAATAGTACTCTTTTCCTGAGGA  100

seq1  TAAAATTTAGTACATTCATAAATGTTTCAAAATTACCTCTAATTGTTTGG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTTAGTACATTCATAAATGTTTCAAAATTACCTCTAATTGTTTGG  150

seq1  CACATGGTCCACTAACAAGTGCAACCACACCATTGTCAGATACCTAAACA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGGTCCACTAACAAGTGCAACCACACCATTGTCAGATACCTAAACA  200

seq1  AAAGGGAAAAGAAATATATCTTGTGATGGAGATGAAAGAATTTTCTAAAG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGAAAAGAAATATATCTTGTGATGGAGATGAAAGAATTTTCTAAAG  250

seq1  TACATTAATCATGAAGAATAACTACCTTCCATTCAGCAAACATATATTTT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTAATCATGAAGAATAACTACCTTCCATTCAGCAAACATATATTTT  300

seq1  AGTTATATATTCTTCCCATTAACTAAGAGTGAGTTCAATGCCCCTAACAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATATATTCTTCCCATTAACTAAGAGTGAGTTCAATGCCCCTAACAA  350

seq1  AGGACCATACTTTTTCTGTTTATTGAAAAGCACATCCAGAAAGATATAGG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACCATACTTTTTCTGTTTATTGAAAAGCACATCCAGAAAGATATAGG  400

seq1  AAAGGAATAAGTGTTGTATTAATCTTTTACAGAAGTTTTATAAGGGAAGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAATAAGTGTTGTATTAATCTTTTACAGAAGTTTTATAAGGGAAGA  450

seq1  AATACTTTATCTGACTCATTGACCCAGAACAGCAAGAAAAACCACAAATC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTTTATCTGACTCATTGACCCAGAACAGCAAGAAAAACCACAAATC  500

seq1  ACATTATTCCTTATACACAAATACATTGTTCTGAGTTAGGGGCATGGAAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTATTCCTTATACACAAATACATTGTTCTGAGTTAGGGGCATGGAAA  550

seq1  GGTTATAAGGGAGACATATATATTGTTCTGAGGCAGGGTCATGGACTGGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATAAGGGAGACATATATATTGTTCTGAGGCAGGGTCATGGACTGGT  600

seq1  TGGATATGAATGAAAAATAAATAATACAGTGTGAGATCAAAGCTATGTGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATATGAATGAAAAATAAATAATACAGTGTGAGATCAAAGCTATGTGT  650

seq1  TCAACTTAGCTTTTAAAAGTTGATTACAAGACTGCCATACCCGGGATCCA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTTAGCTTTTAAAAGTTGATTACAAGACTGCCATACCCGGGATCCA  700

seq1  TCCCATAATCAGCCTCCAAATGCTGACAGCATTGCATACACCAGCAAGAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATAATCAGCCTCCAAATGCTGACAGCATTGCATACACCAGCAAGAT  750

seq1  TTTGCTGAAAGGACCCTGATATAGCTGTCTCTTGTGAGACTATGCCAGGG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTGAAAGGACCCTGATATAGCTGTCTCTTGTGAGACTATGCCAGGG  800

seq1  CCTGGCAAACACAGAAGTGGATGCCCACAGTCAGCTAT  837
      ||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCAAACACAGAAGTGGATGCCCACAGTCAGCTAT  838

seq1: chr6_149295263_149295402
seq2: B6Ng01-094J13.g_72_211 (reverse)

seq1  ACACACACACACACACACACACACACAATCTCTCTCTCTCTCCCCCCTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACAATCTCTCTCTCTCTCCCCCCTCC  50

seq1  CTTTCCCAAGACAGGATTGTGTGTTTGTGTGTGTGTGTGTGTGTGTGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCCAAGACAGGATTGTGTGTTTGTGTGTGTGTGTGTGTGTGTGTGT  100

seq1  GTGTAGTCTTGACTGTCCTGGAACTAGCTCTGGCCTCTAA  140
      ||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAGTCTTGACTGTCCTGGAACTAGCTCTGGCCTCTAA  140