BAC Information

Click to search

BAC

Clone NameB6Ng01-095N22
Chromosome6 (Build37)
Map Location 18,835,452 - 18,835,968
singlet/doubletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-095N22.bB6Ng01-095N22.g
ACCDH906691DH906692
length9491,198
definitionDH906691|Mus musculus domesticus DNA, BAC clone: B6Ng01-095N22, 5' end.DH906692|Mus musculus domesticus DNA, BAC clone: B6Ng01-095N22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ctttgtcttattgacggtgtcttttgccttgaagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataactttcagtgtctctggttttatgtgaagttctttga
tccatttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctatactagtaccatgcagtttttaccacaattgc
tctgtagtaaagctttgggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgatatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagacttgaagttttatcatac
agatctttcacttccttagtagagtcacgccgagatattttatattatt

gaattcttctggttcaccatctgcacacagaggttggacttgttcagaga
cctctatatacaagttctgccaggaaagaactggtctcccaggagtgctg
acataggcttacagacccaccgaagaaacaaattccagccagagccaaca
agaccatctaacaccagagataaccaggtggtgaaagacaaattcaagaa
ttgtaccaacagaaacaaagactgtttaacaacatcagaacccaattcta
ccaccacagcaagtcctggatttcccaacacaggaaaagcaagatatgga
tttgaattcatatatcatgatgtttgtagaggatttttaaaaggacatta
ataactcacttaaagaaatacaggaaaacacagctaaacaagtagaatcc
cttaaagaggaaaaaaaaatgccccttaagaattacaggaaaacacaacc
atacaggtgcaggatttgaacaaaaccatcaaggatctaaagctggaagt
agaaacaataaagaaatcacaaaggaagacaactctggggatagagaact
taggaaagagatcaggagctatggatgcaagcatcaccaacagaatacaa
gaaatggaagagaaaatctcaggcactatactatactatagttaagatac
tatagaaagcattgacacaaaataaaataaaatgcaagatgaaaaaaaaa
tcctaatacaaaatacccagaaaatacaggacacaatgaaaagaccaaac
ctaaggatcataggtatagaagaaagtgaagattcccaagttaaagagct
ggtaaatatcttcatcaaaattatcaaagaaaacttgcctaacataaaga
aagagatgcccatgaacatacaagaaacctacataacaccaaatagattg
ggatcataaagaaatttccacctgtcatacatatcaaacaccaaatgcac
aaattaggaaagaatgttaaagcagtagtgaaaaggtcaagtaacatata
aggcagactattagatacacccagacgtctcaccagagctaagaagcaga
gctcctggcaactcatacagacctaagagaaccaaatgccagcccaggct
actaccagcaaactctgttaccattgatggaattcattattctggacaac
aatctggaaacgagaaatcctctctacacaatctgtcgtctagagggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835452_18835968
seq2: B6Ng01-095N22.b_48_565 (reverse)

seq1  ACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATC  50

seq1  CAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTT  100

seq1  GTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCTCCATGTACTA  150
      |||||| |||||||||||| |||||||||||||||||||||| |||||||
seq2  GTTATCATGTAGAAGAATGCGAATCGATCCATACTTATCTCCTTGTACTA  150

seq1  AGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTG  200
      ||||||||||||| |||||||| |||||||||||||||||||||||||||
seq2  AGGTCAAATCTAAATGGATCAAAGAACTTCACATAAAACCAGAGACACTG  200

seq1  AAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCAGAGG  250
      ||| |||||||||||||||||||||||||||||||||||||||||| |||
seq2  AAAGTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGG  250

seq1  GGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTGAGGTAGAGAA  299
      |||||| ||||||||||||||||||||||| |||||||| || | |||||
seq2  GGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAA  300

seq1  TCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGAC  349
      | |||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTTCAAGGCAAAAGAC  350

seq1  ACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTAC  399
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  ACCGTCAATAAGACAAAGAGACCACCAACAGATTGGGAAAGGATCTTTAC  400

seq1  CTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCA  450

seq1  AGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAAATGGGGCTCA  499
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCA  500

seq1  GAACTGAACAAAGAATTC  517
      ||||||||||||||||||
seq2  GAACTGAACAAAGAATTC  518


| Home | SequenceCutter | Blast | Download |