BAC Information

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BAC

Clone NameB6Ng01-097D03
Chromosome6 (Build37)
Map Location 25,534,838 - 25,677,167
singlet/doubletdoublet
Overlap geneGpr37
Upstream geneEG626715, Lmod2, Wasl, 4932701A20Rik, Hyal4, Spam1, Hyal5, 6332401O19Rik, LOC384358
Downstream genePot1a, EG626912, LOC100041210
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-097D03.bB6Ng01-097D03.g
ACCDH907633DH907634
length1,2021,117
definitionDH907633|Mus musculus domesticus DNA, BAC clone: B6Ng01-097D03, 5' end.DH907634|Mus musculus domesticus DNA, BAC clone: B6Ng01-097D03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(25,534,838 - 25,536,050)(25,676,038 - 25,677,167)
sequence
gaattcagtcagtcagtcagtcagtcagtcagtttctactgcaaaggaac
caagccctaggtcataataaatccacccactgctctatgaaatctctaaa
gcattggccaagtggacatccttgatacatgccagcgtactgctgtgccc
tttgccaaagcccctagccaccccacaccattataaaacattttttcatt
caaagagcattgtgatggatatctcaaatgacatacagaatgctttaaaa
aaagagagagaaatctacttgtcattttatagatctataacctgaggtgt
agaaattctttggtttaattgagaaccctcccctccatatactcagtcat
cctggtgacttgatccccagtcagtagtgcttgctgtgtggggaagtcta
aaatgtcaggtattgctagaggaagcctttccactggaggcaggctttgg
aagttctttgtcttgtcctgctatgtatttgttgttatagatgtgatctt
tccactttctgctctgctgcaatgccttcctaccatgatagactcttaca
tcttttgaactataagtcaaaacaacttttcttcttctataagttgtttt
tggctgttgtattttatcacagtatcagaaacacaattactaatacagag
acttaagtgacaaacatacagtcattaaatttctaatgcaaattttttag
atcaataatttttttatattatgtgattttttcataataatctataattt
gtgaagaagacatatcagaaaggtcaaaattataacaaaatgtttacatg
atgcataattactatagttgtaaagcaaaagactataccaaagctctcca
tttgagatcaagcgctaaatatcaccttaattttgaattgattaaaaatg
tttataggcatgtttttagaatattgactttgtataaatattgttatact
ggatagtatattttctgtatttctggagctcacactgcaaggaggcagct
ttgacctgatccggtagcctgggtgtgagcttattctgtttctgaccagc
agggtaatttgaagaagactttggatcctctaaggctcagtctacagatg
caacatcaaactagttagatgactcctgctccttatggagttctcaggta
catcattcttgtgtaaacatgtaacatctttcatctgattctgatctctt
gg
gaattcctcactgaatggattcgtaggaggttgtggaaattgaggaatgt
ggccagattggccgaatctgctctcctgaatcatgtatttggaaggtacc
tgttgcccaacctcttccacattctcttggcttcctgaacaaccgagact
gatgtgagcgttctcgctgtcacaccctctgacatcactctgtcttgcgt
gcacctcagtgttataaatatggccaacagtgaaatgagaacagacccta
agccagaataaatccggcccccttgaagttgttttctttagaatctcatc
atagtgatgaaaagctagttaacatggtgtttttacattcaacaagcaga
tttcattgaatttttaactttgttcagctctggcaggattgaatagatag
cagtaagccatcagtgcctgccaaaaattacaaccaaaatgaatcaggct
gctgctgctagtgatagtctttcctggatgtttaagttagtgcaattttg
aaataatttgattctcattttaggaactgaatgagtaagaaatcacccca
gcaggatatatgtagtttcctgtttttgcttttattttgtgttagtttag
tttattttagttttgtttccttttaagacagaaagtcactctgcagccca
ggctactgtggaactatgtagcccaagcttttatggaactggcggtaact
ctgccttagcctttcagagcagagattacaggcatgagccaccaaaccta
gttaaatgtttttctcaagaaaggttgtgaaaatcagtgtcgtgatagca
taacaatctgatcatcttcacactgtgtggctaggctctagaataagtag
aggaacaattaagagtgtactaatttaagacattttcattctttagttaa
gagaggtatcatttatgctactaaagagcatacaaacaaaacagcgtaac
actcctttgtttgctgtagcactaaagccactgttattcacaatttgtgc
ataaggatttcatgtaaacatatcaaaacagcagagtatcatgttctgtc
ataatttacccatactagaatttgtagaataacaaaaaaaattcactata
tggtggaatgcccattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_25534838_25536050
seq2: B6Ng01-097D03.b_45_1246

seq1  GAATTCAGTCAGTCAGTCAGTCAGTCAGTCAGTTTCTACTGCAAAGGAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTCAGTCAGTCAGTCAGTCAGTCAGTTTCTACTGCAAAGGAAC  50

seq1  CAAGCCCTAGGTCATAATAAATCCACCCACTGCTCTATGAAATCTCTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCCTAGGTCATAATAAATCCACCCACTGCTCTATGAAATCTCTAAA  100

seq1  GCATTGGCCAAGTGGACATCCTTGATACATGCCAGCGTACTGCTGTGCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGGCCAAGTGGACATCCTTGATACATGCCAGCGTACTGCTGTGCCC  150

seq1  TTTGCCAAAGCCCCTAGCCACCCCACACCATTATAAAACATTTTTTCATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCAAAGCCCCTAGCCACCCCACACCATTATAAAACATTTTTTCATT  200

seq1  CAAAGAGCATTGTGATGGATATCTCAAATGACATACAGAATGCTTTAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAGCATTGTGATGGATATCTCAAATGACATACAGAATGCTTTAAAA  250

seq1  AAAGAGAGAGAAATCTACTTGTCATTTTATAGATCTATAACCTGAGGTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGAGAGAAATCTACTTGTCATTTTATAGATCTATAACCTGAGGTGT  300

seq1  AGAAATTCTTTGGTTTAATTGAGAACCCTCCCCTCCATATACTCAGTCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATTCTTTGGTTTAATTGAGAACCCTCCCCTCCATATACTCAGTCAT  350

seq1  CCTGGTGACTTGATCCCCAGTCAGTAGTGCTTGCTGTGTGGGGAAGTCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTGACTTGATCCCCAGTCAGTAGTGCTTGCTGTGTGGGGAAGTCTA  400

seq1  AAATGTCAGGTATTGCTAGAGGAAGCCTTTCCACTGGAGGCAGGCTTTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTCAGGTATTGCTAGAGGAAGCCTTTCCACTGGAGGCAGGCTTTGG  450

seq1  AAGTTCTTTGTCTTGTCCTGCTATGTATTTGTTGTTATAGATGTGATCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCTTTGTCTTGTCCTGCTATGTATTTGTTGTTATAGATGTGATCTT  500

seq1  TCCACTTTCTGCTCTGCTGCAATGCCTTCCTACCATGATAGACTCTTACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTTTCTGCTCTGCTGCAATGCCTTCCTACCATGATAGACTCTTACA  550

seq1  TCTTTTGAACTATAAGTCAAAACAACTTTTCTTCTTCTATAAGTTGTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTGAACTATAAGTCAAAACAACTTTTCTTCTTCTATAAGTTGTTTT  600

seq1  TGGCTGTTGTATTTTATCACAGTATCAGAAACACAATTACTAATACAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGTTGTATTTTATCACAGTATCAGAAACACAATTACTAATACAGAG  650

seq1  ACTTAAGTGACAAACATACAGTCATTAAATTTCTAATGCAAATTTTTTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAAGTGACAAACATACAGTCATTAAATTTCTAATGCAAATTTTTTAG  700

seq1  ATCAATAATTTTTTTATATTATGTGATTTTTTCATAATAATCTATAATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATAATTTTTTTATATTATGTGATTTTTTCATAATAATCTATAATTT  750

seq1  GTGAAGAAGACATATCAGAAAGGTCAAAATTATAACAAAATGTTTACATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGAAGACATATCAGAAAGGTCAAAATTATAACAAAATGTTTACATG  800

seq1  ATGCATAATTACTATAGTTGTAAAGCAAAAGACTATACCAAAGCTCTCCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATAATTACTATAGTTGTAAAGCAAAAGACTATACCAAAGCTCTCCA  850

seq1  TTTGAGATCAAGCGCTAAATATCACCTTAATTTTGAATTGATTAAAAATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGATCAAGCGCTAAATATCACCTTAATTTTGAATTGATTAAAAATG  900

seq1  TTTATAGGCATGTTTTTAGAATATTGACTTTGTATAAATATTGTTATACT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAGGCATGTTTTTAGAATATTGACTTTGTATAAATATTGTTATACT  950

seq1  GGATAGTATATTTTCTGTATTTCTGGAGCTCACACTGCAAGGGAGGCAGC  1000
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GGATAGTATATTTTCTGTATTTCTGGAGCTCACACTGCAA-GGAGGCAGC  999

seq1  TTTGACCTGATCCGGTAGCCTGGGTGTGAGCCTTATTCTGTTTCTGACCA  1050
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TTTGACCTGATCCGGTAGCCTGGGTGTGAG-CTTATTCTGTTTCTGACCA  1048

seq1  GCAGGGTAATTTGTAGGAAGACTATGGATTCTCTAAGGCTCAGTCTACAA  1100
      ||||||||||||| | ||||||| ||||| |||||||||||||||||| |
seq2  GCAGGGTAATTTG-AAGAAGACTTTGGATCCTCTAAGGCTCAGTCTAC-A  1096

seq1  GATGCAAACATCAAAACTAAGTTAGATGACTCATGGCTCTTTATGAGTTT  1150
      ||||| |||||| ||||| ||||||||||||| | |||| |||||   ||
seq2  GATGC-AACATC-AAACT-AGTTAGATGACTCCT-GCTCCTTATGGAGTT  1142

seq1  CTCAGTTACATCATCCTTGTGCTAAACATGTACATTCTTTTCACTCTGAT  1200
      ||||| |||||||| |||||| ||||||||||   || ||||| ||||||
seq2  CTCAGGTACATCATTCTTGTG-TAAACATGTAACATC-TTTCA-TCTGAT  1189

seq1  TCTGATCTCTTGG  1213
      |||||||||||||
seq2  TCTGATCTCTTGG  1202

seq1: chr6_25676038_25677167
seq2: B6Ng01-097D03.g_68_1184 (reverse)

seq1  AAATGGGCATTTCCACCATTATAGTGAATTTTTTTTTTTGTTATTCTAAC  50
      ||||||||| |||||||| |||||||||   |||||||||||||||| ||
seq2  AAATGGGCA-TTCCACCA-TATAGTGAA---TTTTTTTTGTTATTCT-AC  44

seq1  AAAATTTCTAGTATGGGTAAAATGATGACAG-ACATGATACTCTGCTGTT  99
      |||  ||||||||||||| |||| ||||||| ||||||||||||||||||
seq2  AAA--TTCTAGTATGGGT-AAATTATGACAGAACATGATACTCTGCTGTT  91

seq1  TTGAATATGTGTTACATGAAATCCTTATGCACAAATTGTGAATAACAGTG  149
      ||| |||||| |||||||||||||||||||||||||||||||||||||||
seq2  TTG-ATATGT-TTACATGAAATCCTTATGCACAAATTGTGAATAACAGTG  139

seq1  GCTTTAGTGCTACAGCAAACAAAGGAGTGTTACGCTGTTTTTGTTTTGTA  199
      |||||||||||||||||||||||||||||||||||||||||   ||||||
seq2  GCTTTAGTGCTACAGCAAACAAAGGAGTGTTACGCTGTTTT--GTTTGTA  187

seq1  TGCTCTTTAGTAGCATTAAATGATACCTCTCTTAACTAAAGAATGAAAAT  249
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TGCTCTTTAGTAGCA-TAAATGATACCTCTCTTAACTAAAGAATGAAAAT  236

seq1  GTCTTAAATTAGTACACTCTTAATTGTTCCTCTACTTATTCTAGAGCCTA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTAAATTAGTACACTCTTAATTGTTCCTCTACTTATTCTAGAGCCTA  286

seq1  GCCACACAGTGTGAAGATGATCAGATTGTTATGCTATCACGACACTGATT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACACAGTGTGAAGATGATCAGATTGTTATGCTATCACGACACTGATT  336

seq1  TTCACAACCTTTCTTGAGAAAAACATTTAACTAGGTTTGGTGGCTCATGC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAACCTTTCTTGAGAAAAACATTTAACTAGGTTTGGTGGCTCATGC  386

seq1  CTGTAATCTCTGCTCTGAAAGGCTAAGGCAGAGTTACCGCCAGTTCCATA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAATCTCTGCTCTGAAAGGCTAAGGCAGAGTTACCGCCAGTTCCATA  436

seq1  AAAGCTTGGGCTACATAGTTCCACAGTAGCCTGGGCTGCAGAGTGACTTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTTGGGCTACATAGTTCCACAGTAGCCTGGGCTGCAGAGTGACTTT  486

seq1  CTGTCTTAAAAGGAAACAAAACTAAAATAAACTAAACTAACACAAAATAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTTAAAAGGAAACAAAACTAAAATAAACTAAACTAACACAAAATAA  536

seq1  AAGCAAAAACAGGAAACTACATATATCCTGCTGGGGTGATTTCTTACTCA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAAAACAGGAAACTACATATATCCTGCTGGGGTGATTTCTTACTCA  586

seq1  TTCAGTTCCTAAAATGAGAATCAAATTATTTCAAAATTGCACTAACTTAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTTCCTAAAATGAGAATCAAATTATTTCAAAATTGCACTAACTTAA  636

seq1  ACATCCAGGAAAGACTATCACTAGCAGCAGCAGCCTGATTCATTTTGGTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCAGGAAAGACTATCACTAGCAGCAGCAGCCTGATTCATTTTGGTT  686

seq1  GTAATTTTTGGCAGGCACTGATGGCTTACTGCTATCTATTCAATCCTGCC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTTTTGGCAGGCACTGATGGCTTACTGCTATCTATTCAATCCTGCC  736

seq1  AGAGCTGAACAAAGTTAAAAATTCAATGAAATCTGCTTGTTGAATGTAAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTGAACAAAGTTAAAAATTCAATGAAATCTGCTTGTTGAATGTAAA  786

seq1  AACACCATGTTAACTAGCTTTTCATCACTATGATGAGATTCTAAAGAAAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCATGTTAACTAGCTTTTCATCACTATGATGAGATTCTAAAGAAAA  836

seq1  CAACTTCAAGGGGGCCGGATTTATTCTGGCTTAGGGTCTGTTCTCATTTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTCAAGGGGGCCGGATTTATTCTGGCTTAGGGTCTGTTCTCATTTC  886

seq1  ACTGTTGGCCATATTTATAACACTGAGGTGCACGCAAGACAGAGTGATGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTGGCCATATTTATAACACTGAGGTGCACGCAAGACAGAGTGATGT  936

seq1  CAGAGGGTGTGACAGCGAGAACGCTCACATCAGTCTCGGTTGTTCAGGAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGGTGTGACAGCGAGAACGCTCACATCAGTCTCGGTTGTTCAGGAA  986

seq1  GCCAAGAGAATGTGGAAGAGGTTGGGCAACAGGTACCTTCCAAATACATG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGAGAATGTGGAAGAGGTTGGGCAACAGGTACCTTCCAAATACATG  1036

seq1  ATTCAGGAGAGCAGATTCGGCCAATCTGGCCACATTCCTCAATTTCCACA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGGAGAGCAGATTCGGCCAATCTGGCCACATTCCTCAATTTCCACA  1086

seq1  ACCTCCTACGAATCCATTCAGTGAGGAATTC  1130
      |||||||||||||||||||||||||||||||
seq2  ACCTCCTACGAATCCATTCAGTGAGGAATTC  1117