BAC Information

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BAC

Clone NameB6Ng01-097M08
Chromosome6 (Build37)
Map Location 9,258,291 - 9,259,286
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100036521, LOC667028, A430035B10Rik, Glcci1, Ica1, LOC100040238, Nxph1
Downstream geneLOC330264
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-097M08.bB6Ng01-097M08.g
ACCDH908050DH908051
length1,0771,142
definitionDH908050|Mus musculus domesticus DNA, BAC clone: B6Ng01-097M08, 5' end.DH908051|Mus musculus domesticus DNA, BAC clone: B6Ng01-097M08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatgattcgtactgtaagcctggtttaaagcctacagttgagaaa
gtcttacgtcctgtgttgggggtacctgttaatgtttatttggccattca
gctggtgaagtcacaggttctgggttagatgatctattattgttcatttg
gccaatgaacattgcatcgaactgccttctaaatattcacatttataccc
ttgaacccattctgctctcaacgttggccagagaagcttgcttttgaaat
aggctgtagtcaatggagagatgaatgacagctcaaatgttctgagaatc
aatgactgtagtgctcagctctaagtgagacatctttatcaactcttctg
caaatattaatcaggaagaggaggaataaataatgtaaagccagaagatg
agaagacatggtgagaggcgctgtcttctggacctcacttggcaattcac
acccatgaacccatggcaactactgttagctctaaaaatcttggacaaga
taaagccagataattggatcttggtcttgtttgtttgttcatccatttgt
tttaagaccatcagcttttgttaaggacatttttctttaaaactattgtt
gaaaacagtctattctccttcccaagaagattcatggatcctcctagacc
cttcttctttatttaacttgtctgggtctgtggattgtagcatgattatt
ccttacttaacagctaatatccacttataagacagtatatattatgtatt
tctttttttggtctggattgccttgatcgggactatttgagtttagggag
ggaggaatggttcaagagagatgactggaatagttgagcatttatagatt
atatggaaacctagttcagtagaaatattctagaatctatgagggtaaca
ttactgaagacttgtagtaatggagatatggagcctgaattggccattct
tctataaccaagctaggttccccatggtgggaaatgagacaccaacccag
caccaaagccttcctttctacagatgcactgtggcattggtggcacgacc
ttggtgaagtagccaccaatactgatt
gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcagggtggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattaagaatttttgc
attgatgttcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagaataccttctacttctatcttgtgaaaaagtttgtgcagaactgg
agttagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactattaataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taggattttgtccctgtgccctttagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaacaactcctcgtttggttgattctttgaa
tagttcttcttgtttccacttggttgatttcacccctgagtttgattatt
tcctgccgtctactcctcttgggtgaatttgcttccttttttctagagct
tttagatgtgtgtcaagctgctagtatgtgctctctcccgttttttcttg
aaggcactctagctaatgagtttcccccttaaagatgctttcattggtcc
caaaggtttgggaactatgtgggctcattttcataaactcaaaaagtctt
taatttctttcttattgcatcctgtgactcagggatcaattgagaaagaa
ggtgtcagttctcaggaagtgtggctttcctcattatatatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_9258291_9259286
seq2: B6Ng01-097M08.b_135_1127 (reverse)

seq1  AATCAGTAATTGGTTGGCTACTTCTACAAGGTCTGTGCCACCAATGCCAC  50
      ||||||| ||||| ||||||||||  ||||||| ||||||||||||||||
seq2  AATCAGT-ATTGG-TGGCTACTTCACCAAGGTC-GTGCCACCAATGCCAC  47

seq1  AGTGCATCTTGTAGAAAGGAAGGCTTTGTGGCTGGGTTGGTGTCTCA-TT  99
      |||||||| |||||||||||||||||||  ||||||||||||||||| ||
seq2  AGTGCATC-TGTAGAAAGGAAGGCTTTGGTGCTGGGTTGGTGTCTCATTT  96

seq1  CCCACCATGGGGAACCTAGCTTGGTTATAGAAG-ATGGCCAATTCAGGCT  148
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CCCACCATGGGGAACCTAGCTTGGTTATAGAAGAATGGCCAATTCAGGCT  146

seq1  CCATATCCTCCATTACTACAAGTCTTCAGTAATGTTACCCTCATAGATTC  198
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAT-CTCCATTACTACAAGTCTTCAGTAATGTTACCCTCATAGATTC  195

seq1  TAGAATATTTCTACTGAACTAGGTTTCCATATAATCTATAAATGCTCAAC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATATTTCTACTGAACTAGGTTTCCATATAATCTATAAATGCTCAAC  245

seq1  TATTCCAGTCATCTCTCTTGAACCATTCCTCCCTCCCTAAACTCAAATAG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCAGTCATCTCTCTTGAACCATTCCTCCCTCCCTAAACTCAAATAG  295

seq1  TCCCGATCAAGGCAATCCAGACCAAAAAAAGAAATACATAATATATACTG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGATCAAGGCAATCCAGACCAAAAAAAGAAATACATAATATATACTG  345

seq1  TCTTATAAGTGGATATTAGCTGTTAAGTAAGGAATAATCATGCTACAATC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATAAGTGGATATTAGCTGTTAAGTAAGGAATAATCATGCTACAATC  395

seq1  CACAGACCCAGACAAGTTAAATAAAGAAGAAGGGTCTAGGAGGATCCATG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGACCCAGACAAGTTAAATAAAGAAGAAGGGTCTAGGAGGATCCATG  445

seq1  AATCTTCTTGGGAAGGAGAATAGACTGTTTTCAACAATAGTTTTAAAGAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTCTTGGGAAGGAGAATAGACTGTTTTCAACAATAGTTTTAAAGAA  495

seq1  AAATGTCCTTAACAAAAGCTGATGGTCTTAAAACAAATGGATGAACAAAC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTCCTTAACAAAAGCTGATGGTCTTAAAACAAATGGATGAACAAAC  545

seq1  AAACAAGACCAAGATCCAATTATCTGGCTTTATCTTGTCCAAGATTTTTA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAGACCAAGATCCAATTATCTGGCTTTATCTTGTCCAAGATTTTTA  595

seq1  GAGCTAACAGTAGTTGCCATGGGTTCATGGGTGTGAATTGCCAAGTGAGG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTAACAGTAGTTGCCATGGGTTCATGGGTGTGAATTGCCAAGTGAGG  645

seq1  TCCAGAAGACAGCGCCTCTCACCATGTCTTCTCATCTTCTGGCTTTACAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAAGACAGCGCCTCTCACCATGTCTTCTCATCTTCTGGCTTTACAT  695

seq1  TATTTATTCCTCCTCTTCCTGATTAATATTTGCAGAAGAGTTGATAAAGA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATTCCTCCTCTTCCTGATTAATATTTGCAGAAGAGTTGATAAAGA  745

seq1  TGTCTCACTTAGAGCTGAGCACTACAGTCATTGATTCTCAGAACATTTGA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCACTTAGAGCTGAGCACTACAGTCATTGATTCTCAGAACATTTGA  795

seq1  GCTGTCATTCATCTCTCCATTGACTACAGCCTATTTCAAAAGCAAGCTTC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCATTCATCTCTCCATTGACTACAGCCTATTTCAAAAGCAAGCTTC  845

seq1  TCTGGCCAACGTTGAGAGCAGAATGGGTTCAAGGGTATAAATGTGAATAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCCAACGTTGAGAGCAGAATGGGTTCAAGGGTATAAATGTGAATAT  895

seq1  TTAGAAGGCAGTTCGATGCAATGTTCATTGGCCAAATGAACAATAATAGA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAGGCAGTTCGATGCAATGTTCATTGGCCAAATGAACAATAATAGA  945

seq1  TCATCTAACCCAGAACCTGTGACTTCACCAGCTGAATGGCCAAATAAA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTAACCCAGAACCTGTGACTTCACCAGCTGAATGGCCAAATAAA  993