BAC Information

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BAC

Clone NameB6Ng01-098K14
Chromosome6 (Build37)
Map Location 148,046,805 - 148,180,954
singlet/doubletdoublet
Overlap geneMlstd1, Ergic2
Upstream geneKlhdc5, EG665288, LOC100039641, Pthlh, EG622129, Ccdc91, LOC100039712, LOC100039727, LOC100039736
Downstream geneTmtc1, 1110033J19Rik, EG622319, LOC100042984, LOC665372, Ipo8, Caprin2, EG665395, Tera, LOC667138, D030011O10Rik, 4833442J19Rik, C730024G19Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-098K14.bB6Ng01-098K14.g
ACCDH908690DH908691
length2371,118
definitionDH908690|Mus musculus domesticus DNA, BAC clone: B6Ng01-098K14, 5' end.DH908691|Mus musculus domesticus DNA, BAC clone: B6Ng01-098K14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(148,180,718 - 148,180,954)(148,046,805 - 148,047,946)
sequence
gaattctgtctggcctcagtctctcaggttctctgattagattccattaa
tagtctttttgctagtaaatctgggcttcaaaagtaaaggtggcctgtcc
ttacctgtcatccatatcacaagtgcctacttttctgcaggagactctgc
ccttgtctcccttggcagacacctccaggccagactctgccctctgctgg
ctttgtaggtgtctttgggcctttgtgtgtgtgtgtg
gaattctaggacacctgagacaaaccttagtgccccagaaaatggagata
tagtataaatctgagtgaaatttggaaggacccctaaaagttgaatactt
gtgagaaaagtaccaggagtggggtataaaggcaccctcaaagctatgct
ctttccaaacctacccactgtttgtggggaagatacccctggctctcaca
gaaaaaaaattaagtcatttccacttggtctgagtgaaagcttactttac
aaatctgtggttgatatcacatttttttaactgatatttttgaggatcct
ttaagaaaagatcatcctaatacatgaatgttcagaaatgttttactctg
ggtatttagaacacatatattttcatagaagcttctgtgaatggcagcct
gaggatttgatcttgaaataggaagcaaatgcttaaaatccatggcttct
atgtgtaccttaaattaactaaaagaaatgtgttccttcaaaaaaaaaaa
ttctaaatctcaaaccttaatcatcctcgctccttgatggcttcacaaca
tgacaatttcctacctctgttgtctctctttgattctctagccttggtaa
tgacatatgctatcttctaagcacggtgctccttagaatatcatgctcta
cctacttctctactgtccacatacgttgtcatgtgtcagatcactcatac
acaagtgaacacctaaatctgaaccaagccctaattcattccagatcccc
agtctgatttctgccttctacacttctctacctgtatcccttaccatact
gaaggcacgatatccacacagaatctttcttccataactctgtgttccca
gtgcttgccattacgctttcctccacaagcgtgacagctgggattgcttt
catggtaaagatatggctctacagagtcaaacttgagtttagtcccatcc
tgctttcatagctgatgcctccagcatatttggttttgtttattgtttgt
tctatgtcagagacctactatggctcaaacagcacacatagtagcagggg
ctggcaaccaatacatatatggacggtgtccttttgctatgttgtcactt
tatcacctctgttcattc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_148180718_148180954
seq2: B6Ng01-098K14.b_45_281 (reverse)

seq1  CACACACACACACAAAGGCCCAAAGACACCTACAAAGCCAGCAGAGGGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACAAAGGCCCAAAGACACCTACAAAGCCAGCAGAGGGCA  50

seq1  GAGTCTGGCCTGGAGGTGTCTGCCAAGGGAGACAAGGGCAGAGTCTCCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTGGCCTGGAGGTGTCTGCCAAGGGAGACAAGGGCAGAGTCTCCTG  100

seq1  CAGAAAAGTAGGCACTTGTGATATGGATGACAGGTAAGGACAGGCCACCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAAGTAGGCACTTGTGATATGGATGACAGGTAAGGACAGGCCACCT  150

seq1  TTACTTTTGAAGCCCAGATTTACTAGCAAAAAGACTATTAATGGAATCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTTTGAAGCCCAGATTTACTAGCAAAAAGACTATTAATGGAATCTA  200

seq1  ATCAGAGAACCTGAGAGACTGAGGCCAGACAGAATTC  237
      |||||||||||||||||||||||||||||||||||||
seq2  ATCAGAGAACCTGAGAGACTGAGGCCAGACAGAATTC  237

seq1: chr6_148046805_148047946
seq2: B6Ng01-098K14.g_68_1185

seq1  GAATTCTAGGACACCTGAGACAAACCTTAGTGCCCCAGAAAATGGAGATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGGACACCTGAGACAAACCTTAGTGCCCCAGAAAATGGAGATA  50

seq1  TAGTATAAATCTGAGTGAAATTTGGAAGGACCCCTAAAAGTTGAATACTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTATAAATCTGAGTGAAATTTGGAAGGACCCCTAAAAGTTGAATACTT  100

seq1  GTGAGAAAAGTACCAGGAGTGGGGTATAAAGGCACCCTCAAAGCTATGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGAAAAGTACCAGGAGTGGGGTATAAAGGCACCCTCAAAGCTATGCT  150

seq1  CTTTCCAAACCTACCCACTGTTTGTGGGGAAGATACCCCTGGCTCTCACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCAAACCTACCCACTGTTTGTGGGGAAGATACCCCTGGCTCTCACA  200

seq1  GAAAAAAAATTAAGTCATTTCCACTTGGTCTGAGTGAAAGCTTACTTTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAAATTAAGTCATTTCCACTTGGTCTGAGTGAAAGCTTACTTTAC  250

seq1  AAATCTGTGGTTGATATCACATTTTTTTAACTGATATTTTTGAGGATCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTGTGGTTGATATCACATTTTTTTAACTGATATTTTTGAGGATCCT  300

seq1  TTAAGAAAAGATCATCCTAATACATGAATGTTCAGAAATGTTTTACTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAAAAGATCATCCTAATACATGAATGTTCAGAAATGTTTTACTCTG  350

seq1  GGTATTTAGAACACATATATTTTCATAGAAGCTTCTGTGAATGGCAGCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTTAGAACACATATATTTTCATAGAAGCTTCTGTGAATGGCAGCCT  400

seq1  GAGGATTTGATCTTGAAATAGGAAGCAAATGCTTAAAATCCATGGCTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATTTGATCTTGAAATAGGAAGCAAATGCTTAAAATCCATGGCTTCT  450

seq1  ATGTGTACCTTAAATTAACTAAAAGAAATGTGTTCCTTCAAAAAAAAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTACCTTAAATTAACTAAAAGAAATGTGTTCCTTCAAAAAAAAAAA  500

seq1  TTCTAAATCTCAAACCTTAATCATCCTCGCTCCTTGATGGCTTCACAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAATCTCAAACCTTAATCATCCTCGCTCCTTGATGGCTTCACAACA  550

seq1  TGACAATTTCCTACCTCTGTTGTCTCTCTTTGATTCTCTAGCCTTGGTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAATTTCCTACCTCTGTTGTCTCTCTTTGATTCTCTAGCCTTGGTAA  600

seq1  TGACATATGCTATCTTCTAAGCACGGTGCTCCTTAGAATATCATGCTCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATATGCTATCTTCTAAGCACGGTGCTCCTTAGAATATCATGCTCTA  650

seq1  CCTACTTCTCTACTGTCCACATACGTTGTCATGTGTCAGATCACTCATAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACTTCTCTACTGTCCACATACGTTGTCATGTGTCAGATCACTCATAC  700

seq1  ACAAGTGAACACCTAAATCTGAACCAAGCCCTAATTCATTCCAGATCCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTGAACACCTAAATCTGAACCAAGCCCTAATTCATTCCAGATCCCC  750

seq1  AGTCTGATTTCTGCCTTCTACACTTCTCTACCTGTATCCCTTACCATACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGATTTCTGCCTTCTACACTTCTCTACCTGTATCCCTTACCATACT  800

seq1  GAAGGCACGATATCCACACAGAATCTTTCTTCCATAACTCTGTGTTCCCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCACGATATCCACACAGAATCTTTCTTCCATAACTCTGTGTTCCCA  850

seq1  GTGCTTGCCAATTACGCTTTCCTCCACAAGCGTGACAGCTGGAATTGC-T  899
      ||||||||| |||||||||||||||||||||||||||||||| ||||| |
seq2  GTGCTTGCC-ATTACGCTTTCCTCCACAAGCGTGACAGCTGGGATTGCTT  899

seq1  TCATGGTAAAGATATTGGCTCTACAAGAGTCAAACTTGAGTTTAAGTCCC  949
      |||||||||||||| ||||||||| |||||||||||||||||| ||||||
seq2  TCATGGTAAAGATA-TGGCTCTAC-AGAGTCAAACTTGAGTTT-AGTCCC  946

seq1  ATCCTGCTTTCAATAGCTGAATGCCTCCAGCATATTTGGTTTTTGTTTTA  999
      ||||||||||| ||||||| |||||||||||||||||||||||   ||||
seq2  ATCCTGCTTTC-ATAGCTG-ATGCCTCCAGCATATTTGGTTTT--GTTTA  992

seq1  TTGTTTTTTTCTTAATGTCAGAGACCTACTATGGCTCAAAACAGCCACAC  1049
      ||| ||| ||||  ||||||||||||||||||||||| |||||| |||||
seq2  TTG-TTTGTTCT--ATGTCAGAGACCTACTATGGCTC-AAACAG-CACAC  1037

seq1  ATAAGGTAGCAGAGTGGCTGGCACACAATACATATAATGAGCGGTTGTCA  1099
      |||  |||||  || ||||||||  |||||||||| |||  ||| |||| 
seq2  ATA--GTAGC--AGGGGCTGGCAACCAATACATAT-ATGGACGG-TGTC-  1080

seq1  CTTTTGCCTTATGTTGTCACTTTTATTCACCCTCTGTTCATTC  1142
      |||||||  ||||||||||||||   ||| |||||||||||||
seq2  CTTTTGC--TATGTTGTCACTTT--ATCA-CCTCTGTTCATTC  1118