BAC Information

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BAC

Clone NameB6Ng01-098M21
Chromosome6 (Build37)
Map Location 18,649,034 - 18,650,132
singlet/doubletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2
Downstream geneEG545829, Lsm8, Ankrd7, LOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-098M21.bB6Ng01-098M21.g
ACCDH908784DH908785
length1,0961,177
definitionDH908784|Mus musculus domesticus DNA, BAC clone: B6Ng01-098M21, 5' end.DH908785|Mus musculus domesticus DNA, BAC clone: B6Ng01-098M21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattctgtggtgaacatcatttgttcttggaggctgtaccgacat
taaaggattcggaaggaagtacagcctagaaaattcaagtgctttcctct
cccaaccctttgggtggggaaggtgcctccttagtcacttgagtcctctt
gtgtttggtgccaaaaattcccctcccaattcttctctctcctcttgaca
catatttaaaacagccaaatactcaaggaacttaccacatcttcacaagg
ggaggaaactgtgtattccatttactgtattctaggttatttttagcaga
attaaagaatggtttttgacaatagcaaaatagagctctctgagaactag
ttatttaaacccctactgaaggtatactgacaaaaattagagttttatta
attaggtagcctgagggaagaatggaatcttgagtcaccaccctgtgtgc
caaaataagttgaaatcttcaaacttagccttgtaattagagggtcccag
tgggagagaaagaatgtgctgtagtgaataaaaatcgcaacaagccaagt
ccaaagggaagaggagaaatggagccattgcaaacacgtgcagatttctg
tctgcaagaaaccagagcagggagttggaatgagttgttttgaaatccag
gaggctatggccctggcttcccagtttatagtaaagagttggtgtcatta
tccacacaaaggttaaaaaggaaaataaggttaagctgcccccaccagtt
tttgaaggataaaaaacgcagaggcaagaaattgattcaaatggctccca
tgccccaggaggcaatgttttcatctgataattggcactggaactctggt
gactttcctgcaacttctaaagttctgtaaaataaagcgccatgatgcag
ctagcataaggggaaatgcttatttttttttccaatctatgacagttttc
aatcattgcattttaaaggtctgaggaatttaatcgctgatcatgtagcc
cacgtttcctgagcgcggtgcatccagtgccgccctcaacttcgccctcc
tcataaaaaatctctctaaggcgcttaggctttcatgtgtttttaa
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcattagggaaatgcaaatcaaaacaaccctgagat
tccacttcactccagtcagaatggctaagatcaaaaactcaggtgacagc
ggatgctggcgaggatgtggagaaaggggaacactcctccattgttggtg
ggattgcagcttgtacaaccactctggaaatcagtctggcggttcctcag
aaaattggacatagtactaccagaggatcctgaaatacatctcctgggca
tatatccagaagatgtcccaaccggtaagaagaacacatgctccactatg
ttcatagcagccttatttataatagccagaagctggaaagaacccagatg
cccctcaacagaggaatggatacagaaaatgtgggacatttacacaatgg
aatactactcagctatttaaaaaaatgaatttatgaaattcctaggcaaa
tggatggacctggagggtatcatcctgagtgaggtaacccaatcacaaag
gaactcgcacaatatgtactcactgataagtggatattagcccagaaact
taggatacccaagatataagatacaacttgccaaatgcatgaaattcaag
aagaagaccaaagtgtggacactttaccctttcttagaaatgggaacaaa
acacccgtggaaggagttacagagacaaaatttggagctgtgacgaaagg
atggaccatctagtgattgccatatgcagggatccatcccataatcagct
tccaaatgctgacaccattgcatacactagcaagattttgctcaaggacc
cagatatagctctctcttgtgagactatgccggggcctagcaaacacaga
agtggatgctcatagtcagctattggatggatcacagggctcccaatgga
ggagctagagaaagtagccaagagctaaagggatctgcaccctatagtgg
aacaacattatgaactaaccagtaccccggagctccttgtctcttagcct
gcatatgtatcaaagaatggcttagtcggccatcactgggaaaagaaggc
ccatgacttgcaacttatatgccccaagtacaggagacacacaggccaaa
tagggggagtggggcgtgtaagtaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18649034_18650132
seq2: B6Ng01-098M21.b_49_1144

seq1  GAATTCATTCTGTGGTGAACATCATTTGTTCTTGGAGGCTGTACCGACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTCTGTGGTGAACATCATTTGTTCTTGGAGGCTGTACCGACAT  50

seq1  TAAAGGATTCGGAAGGAAGTACAGCCTAGAAAATTCAAGTGCTTTCCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGATTCGGAAGGAAGTACAGCCTAGAAAATTCAAGTGCTTTCCTCT  100

seq1  CCCAACCCTTTGGGTGGGGAAGGTGCCTCCTTAGTCACTTGAGTCCTCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAACCCTTTGGGTGGGGAAGGTGCCTCCTTAGTCACTTGAGTCCTCTT  150

seq1  GTGTTTGGTGCCAAAAATTCCCCTCCCAATTCTTCTCTCTCCTCTTGACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTGGTGCCAAAAATTCCCCTCCCAATTCTTCTCTCTCCTCTTGACA  200

seq1  CATATTTAAAACAGCCAAATACTCAAGGAACTTACCACATCTTCACAAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTTAAAACAGCCAAATACTCAAGGAACTTACCACATCTTCACAAGG  250

seq1  GGAGGAAACTGTGTATTCCATTTACTGTATTCTAGGTTATTTTTAGCAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAAACTGTGTATTCCATTTACTGTATTCTAGGTTATTTTTAGCAGA  300

seq1  ATTAAAGAATGGTTTTTGACAATAGCAAAATAGAGCTCTCTGAGAACTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAGAATGGTTTTTGACAATAGCAAAATAGAGCTCTCTGAGAACTAG  350

seq1  TTATTTAAACCCCTACTGAAGGTATACTGACAAAAATTAGAGTTTTATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTAAACCCCTACTGAAGGTATACTGACAAAAATTAGAGTTTTATTA  400

seq1  ATTAGGTAGCCTGAGGGAAGAATGGAATCTTGAGTCACCACCCTGTGTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGGTAGCCTGAGGGAAGAATGGAATCTTGAGTCACCACCCTGTGTGC  450

seq1  CAAAATAAGTTGAAATCTTCAAACTTAGCCTTGTAATTAGAGGGTCCCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATAAGTTGAAATCTTCAAACTTAGCCTTGTAATTAGAGGGTCCCAG  500

seq1  TGGGAGAGAAAGAATGTGCTGTAGTGAATAAAAATCGCAACAAGCCAAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGAGAAAGAATGTGCTGTAGTGAATAAAAATCGCAACAAGCCAAGT  550

seq1  CCAAAGGGAAGAGGAGAAATGGAGCCATTGCAAACACGTGCAGATTTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGGGAAGAGGAGAAATGGAGCCATTGCAAACACGTGCAGATTTCTG  600

seq1  TCTGCAAGAAACCAGAGCAGGGAGTTGGAATGAGTTGTTTTGAAATCCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCAAGAAACCAGAGCAGGGAGTTGGAATGAGTTGTTTTGAAATCCAG  650

seq1  GAGGCTATGGCCCTGGCTTCCCAGTTTATAGTAAAGAGTTGGTGTCATTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTATGGCCCTGGCTTCCCAGTTTATAGTAAAGAGTTGGTGTCATTA  700

seq1  TCCACACAAAGGTTAAAAAGGAAAATAAGGTTAAGCTGCCCCCACCAGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACACAAAGGTTAAAAAGGAAAATAAGGTTAAGCTGCCCCCACCAGTT  750

seq1  TTTGAAGGATAAAAAACGCAGAGGCAAGAAATTGATTCAAATGGCTCCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAGGATAAAAAACGCAGAGGCAAGAAATTGATTCAAATGGCTCCCA  800

seq1  TGCCCCAGGAGGCAATGTTTTCATCTGATAATTGGCACTGGAACTCTGGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCCAGGAGGCAATGTTTTCATCTGATAATTGGCACTGGAACTCTGGT  850

seq1  GACTTTCCTGCAACTTCTAAAGTTCTGTAAAATAAAGCGCCATGATGCAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTCCTGCAACTTCTAAAGTTCTGTAAAATAAAGCGCCATGATGCAG  900

seq1  CTAGCATAAGGGGAAATGCTTATTTTTTTTTCCAATCTATGACAGTTTTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCATAAGGGGAAATGCTTATTTTTTTTTCCAATCTATGACAGTTTTC  950

seq1  AAATCATTTGCATTTTAAAGGTCTGAGGAATTTTAATCGCTGATCAATTG  1000
       ||||| ||||||||||||||||||||||| |||||||||||||||  ||
seq2  -AATCA-TTGCATTTTAAAGGTCTGAGGAA-TTTAATCGCTGATCA--TG  995

seq1  TAGCCCACGTTTCCTGAGCGC-GTGCATCCAAGTG-CGCCCTCAACTTCG  1048
      ||||||||||||||||||||| |||||||| |||| ||||||||||||||
seq2  TAGCCCACGTTTCCTGAGCGCGGTGCATCC-AGTGCCGCCCTCAACTTCG  1044

seq1  CCCTCCTCATAAAAATTCTCTCTTAAGCGC-TAGGCTTTCATGTGTTTTT  1097
      ||||||||||||||| ||||||| | |||| |||||||||||||||||||
seq2  CCCTCCTCATAAAAAATCTCTCTAAGGCGCTTAGGCTTTCATGTGTTTTT  1094

seq1  AA  1099
      ||
seq2  AA  1096