BAC Information

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BAC

Clone NameB6Ng01-099M21
Chromosome6 (Build37)
Map Location 9,607,665 - 9,608,051
singlet/doubletsinglet
Overlap genenone
Upstream geneIca1, LOC100040238, Nxph1
Downstream geneLOC330264
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-099M21.bB6Ng01-099M21.g
ACCDH909497DH909498
length1,203934
definitionDH909497|Mus musculus domesticus DNA, BAC clone: B6Ng01-099M21, 5' end.DH909498|Mus musculus domesticus DNA, BAC clone: B6Ng01-099M21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagctctgagccccatcttttaagggggttatttgact
ttctggagtacaccctcttgagttctttatatatattggatattagtccc
ctatctgatttaagataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgatggtgtcttttgccttgcaaaagctttgcagtttca
tgaggtcccatttgttaatcttcgatcttacaacacaagccattgctgtt
ctattcaggaattttttccctgtgcccatatcttcgagacttttccccac
tttctcctctataagtttcagtgtctcaggttttatgtgaagttcctcaa
tccacttagatttgaccttagtacaaggagagaggaatgggtcgatttgc
attcttctacatgataacaaccagctgtgccagcaccatttgttgaaaat
gctatctttattccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtcactataccagtaccatgcagtttttataacaattgc
tctgtagtaaagctttaggtcaggcatggtaattccaccagaggtacttt
tatccttgagaagagcttttgctatcctaggttttttgttattcaagatg
aatttgcagattgctctttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattggttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttcttttaatttctttcttcaaggactttgaagtttttatca
tacagatctttcactttccttagtagagtcatgctaagatattttatatt
attgtgacaatgagaagggtgtgtttccctaatttttttctcagcctgtt
tattctttgtgtaaagaaagggcattgactgtttgagtattttatattcc
agctcttcacaaagcctgttatcagttaagagttctctgcgattttaggt
accttataatatcacttcagcatctgcaagtgcagattgactccttttcc
aatggatcctggactcgttgtgcacaattgctccgcactggaactgctct
cag
gaattcttttgcgatgttgaaagaaattgtgtgcttcctatttcctaaga
accaaatggctgagggtcacaggatgctgatttatagaataatcagaaaa
ggaaacctgaataaataactaaattgaaatgtaaataaaagactgggctt
ttgtctacataagatgatctagcagaaaacagatagtagttctttagaat
tttccctatcaagagctgagcagtccagagatctctagagagtaaaagga
gctcttcagtcatttttcttaacaggatttctgacttgttcagaagatcc
aataatttttaatagcagcttgtctgcctttgatcagaaaagccatcagc
tagccatatagcttttagaatttttactaccagaaagagctgtctcaacc
agagagtttttagaataggaagaaaaagttggttagagctgagcagaaca
gagaggagagagagagagactgaaagagagagagagcacagtgtggaaag
ccatttcagcagaacataggccaccagtttgaacccatgatttgactttg
aatcatttgttttcactgttcccagacacacctcttttcttagaaccttt
tccatgctgaggctggtccttggcagatgtggaactagaaactacaaatg
ggagagaacatgtaacatttgtctttctgggttttgattacctcactcag
gaaagtataaaagtaccatgggcatagaaagaaatgtggtttgaggagga
aataccaacatacatattatatgaagtagaaaactgaaaatcaggagtgt
gttctaggggaaaaggaagatgcgaaattcatgtgaaatagggaagggat
caaagttattttatactatttttatttatcccaaatcattcatatatata
tatatatatatatatatatatatatgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_9607665_9608051
seq2: B6Ng01-099M21.g_615_1001 (reverse)

seq1  CACACACACATATATATATATATATATATATATATATATATATGAATGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACATATATATATATATATATATATATATATATATATGAATGAT  50

seq1  TTTGGATAAATAAAAATAGTATAAAATAACTTTGATCCCTTCCCTATTTC  100
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGATAAATAAAAATAGTATAAAATAACTTTGATCCCTTCCCTATTTC  100

seq1  ACATGAATTTCGCATCTTCCTTTTCCCCTAGAACACACTCCTGATTTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGAATTTCGCATCTTCCTTTTCCCCTAGAACACACTCCTGATTTTCA  150

seq1  GTTTTCTACTTCATATAATATGTATGTTGGTATTTCCTCCTCAAACCACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCTACTTCATATAATATGTATGTTGGTATTTCCTCCTCAAACCACA  200

seq1  TTTCTTTCTATGCCCATGGTACTTTTATACTTTCCTGAGTGAGGTAATCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCTATGCCCATGGTACTTTTATACTTTCCTGAGTGAGGTAATCA  250

seq1  AAACCCAGAAAGACAAATGTTACATGTTCTCTCCCATTTGTAGTTTCTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCAGAAAGACAAATGTTACATGTTCTCTCCCATTTGTAGTTTCTAG  300

seq1  TTCCACATCTGCCAAGGACCAGCCTCAGCATGGAAAAGGTTCTAAGAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACATCTGCCAAGGACCAGCCTCAGCATGGAAAAGGTTCTAAGAAAA  350

seq1  GAGGTGTGTCTGGGAACAGTGAAAACAAATGATTCAA  387
      |||||||||||||||||||||||||||||||||||||
seq2  GAGGTGTGTCTGGGAACAGTGAAAACAAATGATTCAA  387