BAC Information

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BAC

Clone NameB6Ng01-103O08
Chromosome1 (Build37)6 (Build37)
Map Location 146,286,681 - 146,286,72720,453,670 - 20,454,241
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneCdc73, B3galt2, LOC623138, Glrx2, Trove2, Uchl5, Rgs2, Rgs13, Rbm6-ps2, Rgs1, EG639456
Downstream geneRgs21, Rgs18, LOC667877, LOC625057, LOC383570
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-103O08.bB6Ng01-103O08.g
ACCDH912350DH912351
length615565
definitionDH912350|Mus musculus domesticus DNA, BAC clone: B6Ng01-103O08, 5' end.DH912351|Mus musculus domesticus DNA, BAC clone: B6Ng01-103O08, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(146,286,681 - 146,286,727)(20,453,670 - 20,454,241)
sequence
gaattctcatgtgttgaaccatcgtttattcctgggatgaagcctacttg
atcatggtgggtgatgtttttaatgtctttgtttcagagtatttcacaga
gtatttttacattgatgttcaagggaagttgttctgaaattcactttttc
tgtttagtcttgttgtggtttaggtaacaaggtaaatatgtcctcataaa
ataaatatgtcaatgctatttttatttctatttgagggaataatttgagt
agtatttgtattagctcatatttgaaaatctggtaaaattctccaatgaa
ataatctgacactcatactttttttgttgttgttgagtcttttatgagta
cttctattttcttgggtgatacagtactgtttagattgtttacatgatat
ttatttaaatttgataaatgtaatctattgagaatattcaccatcttatt
tagattttccaaaactgtgtagcacaggtttttaaattaagacttagtga
ttctttggattttttaggtatgagttgatcttaccagttactgtgaactc
ctgttattttgatataggatacagtagtgtttgtgtgtgtgtgtgtgtgt
gtgtgtgtgtgtgtg
tgtgagctataaaagtgattgtctaggcaagacatgaccactgattcaat
agtatcaagaatgttataggagcaatcaggtattactacttcctgattaa
atctgaggcctgctgtataagatgaaacccatcttatgtgtttttaatag
ggcaaaggacctgtaactagggaggctctaggtcctggagaaatacctaa
tatgaatattcttctaaacgaatatattactaaatcaacaacatagatgc
acagagagggggaagggaaaagaagtgggagagaaagagagagagaaaga
gagagagagagggagagagagagagagagagagagagagagagagagaga
gagagagagaacaaactactgagtccattaatgtctgcacttgtgtctag
cattgaacaggtataatttggttatctctgtaaatcttcttccagggtga
aactgattctccatctttagctgtaattagtacgtgtagctcttcatcta
tggaattaataaaaatcaagagagtatatttttcggatttttaggggact
ttcaggattgcattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_146286681_146286727
seq2: B6Ng01-103O08.b_602_661 (reverse)

seq1  ACACACACACACACACACACACACACACACACAAA-------------TA  37
      |||||||||||||||||||||||||||||||||||             ||
seq2  ACACACACACACACACACACACACACACACACAAACACTACTGTATCCTA  50

seq1  TATCAAAATA  47
      ||||||||||
seq2  TATCAAAATA  60

seq1: chr6_20453670_20454241
seq2: B6Ng01-103O08.g_69_639 (reverse)

seq1  AAATGCTATCCTGAAAGTCCCCTAAAAATCCTGAAAATATACTCTCTTGA  50
      |||||| ||||||||||||||||||||||||  |||||||||||||||||
seq2  AAATGCAATCCTGAAAGTCCCCTAAAAATCCGAAAAATATACTCTCTTGA  50

seq1  TTTTTATTAATTCCTTAGATGAAGAGCTACAAGTACTAATTGCAGCTAAA  100
      |||||||||||||| |||||||||||||||| ||||||||| ||||||||
seq2  TTTTTATTAATTCCATAGATGAAGAGCTACACGTACTAATTACAGCTAAA  100

seq1  GATGGAGAATCAGTTTCACCCTGGAAGAAGATTCTACAGAGATAACCAAA  150
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GATGGAGAATCAGTTTCACCCTGGAAGAAGATT-TACAGAGATAACCAAA  149

seq1  TTCTACCTGTTCAATGCTAGACACAAGTGCAGTGATTAATGGACTCAGTA  200
      || |||||||||||||||||||||||||||||  ||||||||||||||||
seq2  TTATACCTGTTCAATGCTAGACACAAGTGCAGACATTAATGGACTCAGTA  199

seq1  GTTTGTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  249

seq1  TCTCCCTCTCTCTCTCTCTTTCTCTCTCTCTTTCTCTCCCACTTCTTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCTCTCTCTCTCTCTTTCTCTCTCTCTTTCTCTCCCACTTCTTTTC  299

seq1  CCTTCCCCCTCTCTGTGCATCTATGTTGTTGATTTAGTAATATATTCGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCCCCTCTCTGTGCATCTATGTTGTTGATTTAGTAATATATTCGTT  349

seq1  TAGAAGAATATTCATATTAGGTATTTCTCCAGGACCTAGAGCCTCCCTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGAATATTCATATTAGGTATTTCTCCAGGACCTAGAGCCTCCCTAG  399

seq1  TTACAGGTCCTTTGCCCTATTAAAAACACATAAGATGGGTTTCATCTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGGTCCTTTGCCCTATTAAAAACACATAAGATGGGTTTCATCTTAT  449

seq1  ACAGCAGGCCTCAGATTTAATCAGGAAGTAGTAATACCTGATTGCTCCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAGGCCTCAGATTTAATCAGGAAGTAGTAATACCTGATTGCTCCTA  499

seq1  TAACATTCTTGATACTATTGAATCAGTGGTCATGTCTTGCCTAGACAATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATTCTTGATACTATTGAATCAGTGGTCATGTCTTGCCTAGACAATC  549

seq1  ACTTTTATAGCTCACAGAATTC  572
      ||||||||||||||||||||||
seq2  ACTTTTATAGCTCACAGAATTC  571