BAC Information

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BAC

Clone NameB6Ng01-106I12
Chromosome6 (Build37)
Map Location 108,971,654 - 108,972,811
singlet/doubletsinglet
Overlap genenone
Upstream geneSetmar, Sumf1, LOC100043718, Itpr1, LOC677205, Bhlhb2, Arl8b, Edem1, EG627371
Downstream geneLOC639110, LOC100043720
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-106I12.bB6Ng01-106I12.g
ACCDH914244DH914245
length7311,158
definitionDH914244|Mus musculus domesticus DNA, BAC clone: B6Ng01-106I12, 5' end.DH914245|Mus musculus domesticus DNA, BAC clone: B6Ng01-106I12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctactggtttgtctactaatatattttgtgtctggggacctttca
gcagctcacattatatttaatttagtccccacttttgttctctttggact
tctggagtcgacaacatttcaggagcatccttgcttctcaggatatgcca
ttttccaagacaattggtcagtcactggtttttgtttggttgttggttgt
ttgttttttctgcatgtccttccattcaagtttacctaccattgtttcag
gactagacttaatttataaaaaccagataaaatattgtaagtgtttctca
gtgagacattttagaaagacataaggtgttgtcttgtgcttatcttactt
tctaggtaaattggtctgttttttatctatggtaaagtattaatacttct
ctttatagttattaaataccttaaatagttattttgaaattataaaagcc
ctctgattctaactttcattactaattttagtgtgcactggtggatagtg
tctgcagtgcttatttggggatgagtatatagtgactatttcctttctgc
cttccacataactgtaactctgctgcataggaaaagccattctttttctt
ttttattagatattttcttcattttacatttcaaatgctatcccaaaagt
ttcccataccctctcactgccctgctccccaacccctcccacgcctgcct
cctggccctggcatttcccctgtactggggg

gaattctttgggtatatgcccaggagtgtaaagttgttaccatgtatttt
cttgcttgcttatttaacaaacacttaaatagcagttaacaggagcctgg
cagtgttcaaatcacttcatatgcattgactcatttaacatgttctataa
caatcataggagaccggtgttgctgctgttgtacaaaatggaagaggtac
ttatatcgcttttattttatagaagaatcaaagtcattcagagcttgaac
aagacaggtagtattgagatttgaaacaaaacaatgtgcatcctgagtca
ggattaaccattacacaacactgccactcacatactatcaggcacaaact
ctgataagtgagtccagtaaggagatgtcagcaaagtctgctacctagat
tgctgtagcctgcaaaggattgcaagtaaattgtgacaggtgatgaaagg
cttggtgtttttctttctgtctgatgcagccaccatctcctgcttcaaga
taagctcagctttagatttgaactgaagaatagaagcagcctgaggagaa
cttgtctgcaagcctcagaaaggggagataagactgaggccacttgccat
cagtttgcctttatatgtctttgaacttgagtagtttaaacatttggtcc
tgatgtaaggtctggtgctaagtcattcaaagacatgagggcattgtatc
tgcagaaaaatcattggaagagagcactcataatcagaagtctgatggag
caccaaagaaggagtaaagagactaacctatatcccatagttgaaagtgg
atgaatcggatttgaacttggttttctgtcattctgatgcatgtattctt
gaccatgtgggcaaggattagggcacatacatcattccccagtgtacact
atgttttctttagttgatcagttaagagaataaggtgagaagaccccatc
gatccagacatacctggataagaagatggctttgttcttaaccagaccct
gcctatgaatcagaaaggatttaagaaaacagttgtatgcccatcctggt
cataggcttctgaaaatatgactgcccggaggtatccatgacttggaaca
tcaggctagtgtctcttcaaacaggcgatatttttatgccttgcccataa
tgatcact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_108971654_108972811
seq2: B6Ng01-106I12.g_71_1228

seq1  GAATTCTTTGGGTATATGCCCAGGAGTGTAAAGTTGTTACCATGTATTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGGGTATATGCCCAGGAGTGTAAAGTTGTTACCATGTATTTT  50

seq1  CTTGCTTGCTTATTTAACAAACACTTAAATAGCAGTTAACAGGAGCCTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTTGCTTATTTAACAAACACTTAAATAGCAGTTAACAGGAGCCTGG  100

seq1  CAGTGTTCAAATCACTTCATATGCATTGACTCATTTAACATGTTCTATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTTCAAATCACTTCATATGCATTGACTCATTTAACATGTTCTATAA  150

seq1  CAATCATAGGAGACCGGTGTTGCTGCTGTTGTACAAAATGGAAGAGGTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCATAGGAGACCGGTGTTGCTGCTGTTGTACAAAATGGAAGAGGTAC  200

seq1  TTATATCGCTTTTATTTTATAGAAGAATCAAAGTCATTCAGAGCTTGAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATCGCTTTTATTTTATAGAAGAATCAAAGTCATTCAGAGCTTGAAC  250

seq1  AAGACAGGTAGTATTGAGATTTGAAACAAAACAATGTGCATCCTGAGTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAGGTAGTATTGAGATTTGAAACAAAACAATGTGCATCCTGAGTCA  300

seq1  GGATTAACCATTACACAACACTGCCACTCACATACTATCAGGCACAAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTAACCATTACACAACACTGCCACTCACATACTATCAGGCACAAACT  350

seq1  CTGATAAGTGAGTCCAGTAAGGAGATGTCAGCAAAGTCTGCTACCTAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATAAGTGAGTCCAGTAAGGAGATGTCAGCAAAGTCTGCTACCTAGAT  400

seq1  TGCTGTAGCCTGCAAAGGATTGCAAGTAAATTGTGACAGGTGATGAAAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTAGCCTGCAAAGGATTGCAAGTAAATTGTGACAGGTGATGAAAGG  450

seq1  CTTGGTGTTTTTCTTTCTGTCTGATGCAGCCACCATCTCCTGCTTCAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTGTTTTTCTTTCTGTCTGATGCAGCCACCATCTCCTGCTTCAAGA  500

seq1  TAAGCTCAGCTTTAGATTTGAACTGAAGAATAGAAGCAGCCTGAGGAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTCAGCTTTAGATTTGAACTGAAGAATAGAAGCAGCCTGAGGAGAA  550

seq1  CTTGTCTGCAAGCCTCAGAAAGGGGAGATAAGACTGAGGCCACTTGCCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCTGCAAGCCTCAGAAAGGGGAGATAAGACTGAGGCCACTTGCCAT  600

seq1  CAGTTTGCCTTTATATGTCTTTGAACTTGAGTAGTTTAAACA-TTGGTCC  649
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CAGTTTGCCTTTATATGTCTTTGAACTTGAGTAGTTTAAACATTTGGTCC  650

seq1  TGATGTAAGGTCTGGTGCTAAGTCATTCAAAGACATGAGGGCATTGTATC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTAAGGTCTGGTGCTAAGTCATTCAAAGACATGAGGGCATTGTATC  700

seq1  TGCAGAAAAATCATTGGAAGAGAGCACTCATAATCAGAAGTCTGATGGAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAAAAATCATTGGAAGAGAGCACTCATAATCAGAAGTCTGATGGAG  750

seq1  CACCAAAGAAGGAGTAAAGAGACTAACCTATATCCCATAGTTGAAAGTGG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAAAGAAGGAGTAAAGAGACTAACCTATATCCCATAGTTGAAAGTGG  800

seq1  ATGAATCAGGATTTGAACTTGG-TTTCTGTCATTCTGATGCATGTATTCT  848
      ||||||| |||||||||||||| |||||||||||||||||||||||||||
seq2  ATGAATC-GGATTTGAACTTGGTTTTCTGTCATTCTGATGCATGTATTCT  849

seq1  TGACCATGTGGGCAAGGATTAGGGCACATACATCATTCCCCAGTGTACAC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCATGTGGGCAAGGATTAGGGCACATACATCATTCCCCAGTGTACAC  899

seq1  TATGTTTTCTTTAGTTGATCAGGTTAGAGAATAA-GTGAGAAGA-CACAT  946
      |||||||||||||||||||||| | ||||||||| ||||||||| | |||
seq2  TATGTTTTCTTTAGTTGATCAGTTAAGAGAATAAGGTGAGAAGACCCCAT  949

seq1  CGATCCAGACATA-CTTGATAAGAAGATGGCTTTG-TCTTATCCAGACAC  994
      ||||||||||||| || |||||||||||||||||| ||||| |||||| |
seq2  CGATCCAGACATACCTGGATAAGAAGATGGCTTTGTTCTTAACCAGACCC  999

seq1  TGCCTATGAATCAGAAAGGATTTAAGAAAACAGTTGTATGCCCATCCTGG  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTATGAATCAGAAAGGATTTAAGAAAACAGTTGTATGCCCATCCTGG  1049

seq1  TCATTAAGGCTTCTGAAAAATAATGACTGCCCAGAGGTAT-CATGACTTG  1093
      ||||  |||||||||||||   |||||||||| ||||||| |||||||||
seq2  TCAT--AGGCTTCTGAAAA--TATGACTGCCCGGAGGTATCCATGACTTG  1095

seq1  GAACATCAGCTTAGTGTCTCTTTCAAAACAGCGATAATTTTTATGCTTTG  1143
      |||||||||  ||||||||| ||||||   ||||| |||||||||| |||
seq2  GAACATCAGGCTAGTGTCTC-TTCAAACAGGCGAT-ATTTTTATGCCTTG  1143

seq1  CCATAAATGATCACT  1158
      ||   ||||||||||
seq2  CCCATAATGATCACT  1158


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