BAC Information

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BAC

Clone NameB6Ng01-107K17
Chromosome6 (Build37)
Map Location 124,645,730 - 124,792,626
singlet/doubletdoublet
Overlap geneMboat5, Emg1, Phb2, Ptpn6, Grcc10, Atn1, Eno2, Lrrc23, Spsb2, Tpi1, Usp5, Cdca3, Gnb3, Leprel2
Upstream geneEG435916, EG243628, EG545874, LOC384484, LOC623282, V2r1b, EG384486, Vmn2r-ps34, Vmn2r27, LOC623374, EG622297, Cd163, LOC100043530, 1700013D24Rik, 1700027F06Rik, 1700060L04Rik, Pex5, Clstn3, C1rl, C1r, C1s, LOC667277, EG317677
Downstream geneGpr162, Cd4, Lag3, Ptms, Mlf2, EG667343, Cops7a, C530028O21Rik, Zfp384, Ing4, Acrbp, Gpr92, Chd4, Nol1, A930037G23Rik, Gapdh, Ncapd2, Mrpl51, Vamp1, Tapbpl, Cd27, 4930417O13Rik, Tuba3a, Ltbr, Scnn1a, Tnfrsf1a, Plekhg6, Cd9, Vwf, Tmem16b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-107K17.bB6Ng01-107K17.g
ACCDH915070DH915071
length1,140556
definitionDH915070|Mus musculus domesticus DNA, BAC clone: B6Ng01-107K17, 5' end.DH915071|Mus musculus domesticus DNA, BAC clone: B6Ng01-107K17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(124,645,730 - 124,646,879)(124,792,065 - 124,792,626)
sequence
gaattcctgatcctcctcctctccatcccaaggctgggatttcaggtctg
tgaccaccacgtctggtttatgtagtcctggggaatcaaagcaagaaagt
gagttccaggccagcctaggctatataaaaacaattacaaggaaccaagc
atggtggcgcatgccttcaatcccagcactcaggaggcagaggcaggagg
atctctgtgagtttgaggccagtgtggtctacatggtaagttccagaaca
gcagagctacatagagagacctcgggtcaaaacaaataaacaaaaacggg
aactctgcgtttccgtgtaacacagaactggtgacgaagacactctgggg
taaggcgaacaagtagaaggcctatctaggctgtagagagttcagggtca
gcttgggcagcttcttaacaccctacctcaaaacaatgaactgtgcagag
aggcctggagctataacacagtggtagacaactcttccagcgtgtatgag
gctccgggttcagtcccttacactgtaagtaacgacataattgagcattt
tgttttatggattgacagtttttaagccactgggcgatagtggcgcacac
ctttgatcccaaaactggggaggcaagggcaggcagatctctgtgagttt
caggccaccctggtctacagagtgagttctagggctagaaaccctgtctt
ggggaaaataaataaataaataaaagtaaaaataaaagaaattgcaatta
ccacacactcaaaactatattgccaatggtaaaactaagaatatttttat
tttaactactttattacattgacttatttgcatgtgtgcacaaacacaca
cactcatgtgctagtcagaggccaactggcaggagttggctcgctcttcc
cactgtgtagtccccagggatctggcttggtgataagcactcttaccggc
tcagccatcaccctgaccttacattttatattctaaagcaagaactgtgg
caattataaccatgaccaactctggaacactgtacaggaatagaataggc
aagtggtctttcagaaaacaagagggactgactgtccacatgcccagtgc
aagcatgtcagcttccccacttgataaatgttgagaccag
tgctttactcttcaccctaaagcatggacataaaggagcagacactgtct
ttgcactcctgcacaatcgagtgttttctcaggggggaaatgcatgcacc
caaggtccttgtctccttccatcccttccggggctgcctcagggccctca
gatttcttctctccagtcttatggagtcaggcaggaaaggtcaggctcta
ggatagggaaccaacaagagaccctccaaaaggctctgcccactttggct
tccatgttcggcagcccccgttttgcctttttccttcctggcttagggcc
agtttctcatttgccctaaactcgtccctgagtgagggagggcagagtaa
gagaatcaggaagcctgatgctgtgttcctgcattctcaggctcaggtcc
gtcctcggtgtgggcgccttgtggccttcagctctggtggtgagaatccc
catggtgtatgggctgtgactcggggacggcgctgtgccctagcactgtg
gcacacgtgggcacctgagcacagtgaacaggtagggaggaagaggtgag
ggggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_124645730_124646879
seq2: B6Ng01-107K17.b_47_1186

seq1  GAATTCCTGATCCTCCTCCTCTCCATCCCAAGGCTGGGATTTCAGGTCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGATCCTCCTCCTCTCCATCCCAAGGCTGGGATTTCAGGTCTG  50

seq1  TGACCACCACGTCTGGTTTATGTAGTCCTGGGGAATCAAAGCAAGAAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCACCACGTCTGGTTTATGTAGTCCTGGGGAATCAAAGCAAGAAAGT  100

seq1  GAGTTCCAGGCCAGCCTAGGCTATATAAAAACAATTACAAGGAACCAAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCCAGGCCAGCCTAGGCTATATAAAAACAATTACAAGGAACCAAGC  150

seq1  ATGGTGGCGCATGCCTTCAATCCCAGCACTCAGGAGGCAGAGGCAGGAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGGCGCATGCCTTCAATCCCAGCACTCAGGAGGCAGAGGCAGGAGG  200

seq1  ATCTCTGTGAGTTTGAGGCCAGTGTGGTCTACATGGTAAGTTCCAGAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTGTGAGTTTGAGGCCAGTGTGGTCTACATGGTAAGTTCCAGAACA  250

seq1  GCAGAGCTACATAGAGAGACCTCGGGTCAAAACAAATAAACAAAAACGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGCTACATAGAGAGACCTCGGGTCAAAACAAATAAACAAAAACGGG  300

seq1  AACTCTGCGTTTCCGTGTAACACAGAACTGGTGACGAAGACACTCTGGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTGCGTTTCCGTGTAACACAGAACTGGTGACGAAGACACTCTGGGG  350

seq1  TAAGGCGAACAAGTAGAAGGCCTATCTAGGCTGTAGAGAGTTCAGGGTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGCGAACAAGTAGAAGGCCTATCTAGGCTGTAGAGAGTTCAGGGTCA  400

seq1  GCTTGGGCAGCTTCTTAACACCCTACCTCAAAACAATGAACTGTGCAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGGCAGCTTCTTAACACCCTACCTCAAAACAATGAACTGTGCAGAG  450

seq1  AGGCCTGGAGCTATAACACAGTGGTAGACAACTCTTCCAGCGTGTATGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTGGAGCTATAACACAGTGGTAGACAACTCTTCCAGCGTGTATGAG  500

seq1  GCTCCGGGTTCAGTCCCTTACACTGTAAGTAACGACATAATTGAGCATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCGGGTTCAGTCCCTTACACTGTAAGTAACGACATAATTGAGCATTT  550

seq1  TGTTTTATGGATTGACAGTTTTTAAGCCACTGGGCGATAGTGGCGCACAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTATGGATTGACAGTTTTTAAGCCACTGGGCGATAGTGGCGCACAC  600

seq1  CTTTGATCCCAAAACTGGGGAGGCAAGGGCAGGCAGATCTCTGTGAGTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGATCCCAAAACTGGGGAGGCAAGGGCAGGCAGATCTCTGTGAGTTT  650

seq1  CAGGCCACCCTGGTCTACAGAGTGAGTTCTAGGGCTAGAAACCCTGTCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCACCCTGGTCTACAGAGTGAGTTCTAGGGCTAGAAACCCTGTCTT  700

seq1  GGGGAAAATAAATAAATAAATAAAAGTAAAAATAAAAGAAATTGCAATTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAAAATAAATAAATAAATAAAAGTAAAAATAAAAGAAATTGCAATTA  750

seq1  CCACACACTCAAAACTATATTGCCAATGGTAAAACTAAGAATATTTTTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACACTCAAAACTATATTGCCAATGGTAAAACTAAGAATATTTTTAT  800

seq1  TTTAACTACTTTATTACATTGACTTATTTGCATGTGTGCACAAACACACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACTACTTTATTACATTGACTTATTTGCATGTGTGCACAAACACACA  850

seq1  CACTCATGTGCTAGTCAGAGGCCAACTGGCAGGAGTTGGCTCGCTCTTCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCATGTGCTAGTCAGAGGCCAACTGGCAGGAGTTGGCTCGCTCTTCC  900

seq1  CACTGTGTAGTCCCCAGGGATCTGGCTTGGTGATAAGCACTCTTACCGGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTGTAGTCCCCAGGGATCTGGCTTGGTGATAAGCACTCTTACCGGC  950

seq1  TCAGCCATCACCCTGACCTTACATTTTATATTCTAAAAGCAAGAACTGTG  1000
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TCAGCCATCACCCTGACCTTACATTTTATATTCT-AAAGCAAGAACTGTG  999

seq1  GCAATTATAAACCATGACCAACTCTGGAACACTGTACAGGAATAGAATAG  1050
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GCAATTAT-AACCATGACCAACTCTGGAACACTGTACAGGAATAGAATAG  1048

seq1  GCAAGGTGTCCTTCCAGAAAACAAAGAGGAGACTGACTGTCCACACATGC  1100
      |||| |||  ||| |||||||| |||||| |||||||||||  |||||||
seq2  GCAA-GTGGTCTTTCAGAAAAC-AAGAGG-GACTGACTGTC--CACATGC  1093

seq1  CCAAGTGCAAGCATGTCAGCTCCACCACTTGATAGACTGTTGAGGACCAG  1150
      || |||||||||||||||||| | |||||||||| | |||||| ||||||
seq2  CC-AGTGCAAGCATGTCAGCTTCCCCACTTGATA-AATGTTGA-GACCAG  1140

seq1: chr6_124792065_124792626
seq2: B6Ng01-107K17.g_67_628 (reverse)

seq1  CACCCCCTCACCTCTTCCTCCCTACCTGTTCACTGTGCTCAGGTGCCCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCCTCACCTCTTCCTCCCTACCTGTTCACTGTGCTCAGGTGCCCAC  50

seq1  GTGTGCCACAGTGCTAGGGCACAGCGCCGTCCCCGAGTCACAGCCCATAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCCACAGTGCTAGGGCACAGCGCCGTCCCCGAGTCACAGCCCATAC  100

seq1  ACCATGGGGATTCTCACCACCAGAGCTGAAGGCCACAAGGCGCCCACACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGGGGATTCTCACCACCAGAGCTGAAGGCCACAAGGCGCCCACACC  150

seq1  GAGGACGGACCTGAGCCTGAGAATGCAGGAACACAGCATCAGGCTTCCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGACGGACCTGAGCCTGAGAATGCAGGAACACAGCATCAGGCTTCCTG  200

seq1  ATTCTCTTACTCTGCCCTCCCTCACTCAGGGACGAGTTTAGGGCAAATGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCTTACTCTGCCCTCCCTCACTCAGGGACGAGTTTAGGGCAAATGA  250

seq1  GAAACTGGCCCTAAGCCAGGAAGGAAAAAGGCAAAACGGGGGCTGCCGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTGGCCCTAAGCCAGGAAGGAAAAAGGCAAAACGGGGGCTGCCGAA  300

seq1  CATGGAAGCCAAAGTGGGCAGAGCCTTTTGGAGGGTCTCTTGTTGGTTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAAGCCAAAGTGGGCAGAGCCTTTTGGAGGGTCTCTTGTTGGTTCC  350

seq1  CTATCCTAGAGCCTGACCTTTCCTGCCTGACTCCATAAGACTGGAGAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCTAGAGCCTGACCTTTCCTGCCTGACTCCATAAGACTGGAGAGAA  400

seq1  GAAATCTGAGGGCCCTGAGGCAGCCCCGGAAGGGATGGAAGGAGACAAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCTGAGGGCCCTGAGGCAGCCCCGGAAGGGATGGAAGGAGACAAGG  450

seq1  ACCTTGGGTGCATGCATTTCCCCCCTGAGAAAACACTCGATTGTGCAGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGGGTGCATGCATTTCCCCCCTGAGAAAACACTCGATTGTGCAGGA  500

seq1  GTGCAAAGACAGTGTCTGCTCCTTTATGTCCATGCTTTAGGGTGAAGAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAAAGACAGTGTCTGCTCCTTTATGTCCATGCTTTAGGGTGAAGAGT  550

seq1  AAAGCAGAATTC  562
      ||||||||||||
seq2  AAAGCAGAATTC  562