BAC Information

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BAC

Clone NameB6Ng01-107N05
Chromosome6 (Build37)3 (Build37)
Map Location 18,835,442 - 18,835,96811,028,776 - 11,029,916
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-107N05.bB6Ng01-107N05.g
ACCDH915176DH915177
length1,0101,144
definitionDH915176|Mus musculus domesticus DNA, BAC clone: B6Ng01-107N05, 5' end.DH915177|Mus musculus domesticus DNA, BAC clone: B6Ng01-107N05, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,442 - 18,835,968)(11,028,776 - 11,029,916)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggaatttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttggtacaaggagataagtatggatcaattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatctccttaatttctttcttcagaaatttgaagtttttatcatac
agatctttcacttccttagttagagtcacgcccagatatttatattattt
gtgactatgagaaggtgttgtttccctaattctttctcagcctgttatct
tgtatagaga
gaattcttcaggaagacaatgaatcacacccttgcaggacaggaaaccat
ggattgttcatgagcacagggtgtgcagaaaactatggagttattaaggc
agaagtactaatcagatgacatcagcaaagggcaatggttaggatctgag
acagtaaaatgtcccctcatagaacaaactgccactttttaaacagactg
ccaaaacaaggaatgcattcattattagttttgaattaaaatttaaccat
ttctgatgccaagagggtactgaatttatgttctttataggcttgtatat
gaatcacaaataaggatccttcttaaaagaaacattctaaagttagctgt
gaaacaaaaaacaaattcaagtacctcagtaatataaaatatattacatt
tccaaaatacattccttagagacatgtagatcaaaggatatttgtggatt
ctgagttttaaaagtatattcagtgtcacattttggcaacttgaggttgg
tgaaacattgcagattaaggcctacgcctataagtaccatgctttggttt
tgcatattaaccattgcaaaagggagagacagaagaaagaagaggaggaa
gggatagggaagacagaaatctttaaatgaaataaatataactttgaaga
gatatgttcgcattgataatgtaaatgtggtgaacattcactgtggaata
ttatccagctataatgttcaatggagttggaaccataaactgttaggtaa
atggatggaaccagaacaaagattatattgagtaaggtaacccagaccca
gaaagacaaatgtcctctgttctctttgatttatagtccctaaaaatctc
cctacatgatagtgtctgcatgtagcttctggaaacctgcccatgctggt
tctgattgataaataaagatgccaacatcactatctggggaggagagaca
gaggcaagattttagattcccaggcttgggactaggaggagagagatcca
ccatgctgggaaatattgaagagaggagagatgcatcatgaaaggatgtg
ggactagagcaccatagctgtctgtgaggaccagagagtgagggccaagg
gctgcccaactgggttctagcacagatagaacatgaagtcagta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835442_18835968
seq2: B6Ng01-107N05.b_50_577 (reverse)

seq1  CCAGAGATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50

seq1  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  100

seq1  ACAACTGGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCT  150
      |||||||||||||||| |||||||||||| |||| |||||||||||||||
seq2  ACAACTGGTTGTTATCGTGTAGAAGAATGCGAATTGATCCATACTTATCT  150

seq1  CCATGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  200
      || ||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTACCAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  200

seq1  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250

seq1  TGGGCAGAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTG  299
      |||||| ||||||||| ||||||||||||||||||||||| |||||||| 
seq2  TGGGCACAGGGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTA  300

seq1  AGGTAGAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  349
      || | |||||| ||||||||||||||||||||| ||||||||||||||||
seq2  AGATCGAGAATTGACAAATGGGACCTAATGAAATTCCAAAGTTTCTGCAA  350

seq1  GGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAA  400

seq1  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  450

seq1  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAAAAA  500

seq1  ATGGGGCTCAGAACTGAACAAAGAATTC  527
      ||||||||||||||||||||||||||||
seq2  ATGGGGCTCAGAACTGAACAAAGAATTC  528

seq1: chr3_11028776_11029916
seq2: B6Ng01-107N05.g_86_1211 (reverse)

seq1  TACTGACTTCTATGTTCTATCTTGGTGGCTATGGACCCAGTTGGGCAGCC  50
      |||||||||| |||||||||||  || |||| | ||||||||||||||||
seq2  TACTGACTTC-ATGTTCTATCT--GT-GCTA-GAACCCAGTTGGGCAGCC  45

seq1  CTCTGGGCCTCACTCTCCTGGCTCCTTCACATGACAGCTATGCTGCTCT-  99
      || ||| ||||||||| |||| ||| ||||| |||||||||| |||||| 
seq2  CT-TGGCCCTCACTCT-CTGG-TCC-TCACA-GACAGCTATGGTGCTCTA  90

seq1  GTCCCACACTCCTCTCATGCGTGGCATCTCTCCTCTCCTTCATATTTTCC  149
      |||||||| |||| ||||  |  ||||||||||||| |||||   |||||
seq2  GTCCCACA-TCCTTTCAT--GATGCATCTCTCCTCT-CTTCAATATTTCC  136

seq1  CAGCATGGTGGATCTCTCTCCTCCTAGTCCCAAGCCTGGGAATCTTAAAA  199
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CAGCATGGTGGATCTCTCTCCTCCTAGTCCCAAGCCTGGGAATC-TAAAA  185

seq1  TCTTGCCTCTGTCTCTCCTCCCCAGATAGTGGATGTTGGCATCTTTATTT  249
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TCTTGCCTCTGTCTCTCCTCCCCAGATAGT-GATGTTGGCATCTTTATTT  234

seq1  ATCAATCAGAACCAGCATGGGCAGGTTTCCAGAAGCTACATGCAGACACT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATCAGAACCAGCATGGGCAGGTTTCCAGAAGCTACATGCAGACACT  284

seq1  ATCATGTAAGGAGATTTTTAGGGACTATAAATCAAAGAGAACAGAGGACA  349
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGTAGGGAGATTTTTAGGGACTATAAATCAAAGAGAACAGAGGACA  334

seq1  TTTGTCTTTCTGGGTCTGGGTTACCTTACTCAATATAATCTTTGTTCTGG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTTTCTGGGTCTGGGTTACCTTACTCAATATAATCTTTGTTCTGG  384

seq1  TTCCATCCATTTACCTAACAGTTTATGGTTCCAACTCCATTGAACATTAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATCCATTTACCTAACAGTTTATGGTTCCAACTCCATTGAACATTAT  434

seq1  AGCTGGATAATATTCCACAGTGAATGTTCACCACATTTACATTATCAATG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGATAATATTCCACAGTGAATGTTCACCACATTTACATTATCAATG  484

seq1  CGAACATATCTCTTCAAAGTTATATTTATTTCATTTAAAGATTTCTGTCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAACATATCTCTTCAAAGTTATATTTATTTCATTTAAAGATTTCTGTCT  534

seq1  TCCCTATCCCTTCCTCCTCTTCTTTCTTCTGTCTCTCCCTTTTGCAATGG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTATCCCTTCCTCCTCTTCTTTCTTCTGTCTCTCCCTTTTGCAATGG  584

seq1  TTAATATGCAAAACCAAAGCATGGTACTTATAGGCGTAGGCCTTAATCTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATATGCAAAACCAAAGCATGGTACTTATAGGCGTAGGCCTTAATCTG  634

seq1  CAATGTTTCACCAACCTCAAGTTGCCAAAATGTGACACTGAATATACTTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTTTCACCAACCTCAAGTTGCCAAAATGTGACACTGAATATACTTT  684

seq1  TAAAACTCAGAATCCACAAATATCCTTTGATCTACATGTCTCTAAGGAAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACTCAGAATCCACAAATATCCTTTGATCTACATGTCTCTAAGGAAT  734

seq1  GTATTTTGGAAATGTAATATATTTTATATTACTGAGGTACTTGAATTTGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTGGAAATGTAATATATTTTATATTACTGAGGTACTTGAATTTGT  784

seq1  TTTTTGTTTCACAGCTAACTTTAGAATGTTTCTTTTAAGAAGGATCCTTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTTTCACAGCTAACTTTAGAATGTTTCTTTTAAGAAGGATCCTTA  834

seq1  TTTGTGATTCATATACAAGCCTATAAAGAACATAAATTCAGTACCCTCTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGATTCATATACAAGCCTATAAAGAACATAAATTCAGTACCCTCTT  884

seq1  GGCATCAGAAATGGTTAAATTTTAATTCAAAACTAATAATGAATGCATTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATCAGAAATGGTTAAATTTTAATTCAAAACTAATAATGAATGCATTC  934

seq1  CTTGTTTTGGCAGTCTGTTTAAAAAGTGGCAGTTTGTTCTATGAGGGGAC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTTTGGCAGTCTGTTTAAAAAGTGGCAGTTTGTTCTATGAGGGGAC  984

seq1  ATTTTACTGTCTCAGATCCTAACCATTGCCCTTTGCTGATGTCATCTGAT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTACTGTCTCAGATCCTAACCATTGCCCTTTGCTGATGTCATCTGAT  1034

seq1  TAGTACTTCTGCCTTAATAACTCCATAGTTTTCTGCACACCCTGTGCTCA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTACTTCTGCCTTAATAACTCCATAGTTTTCTGCACACCCTGTGCTCA  1084

seq1  TGAACAATCCATGGTTTCCTGTCCTGCAAGGGTGTGATTCAT  1141
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACAATCCATGGTTTCCTGTCCTGCAAGGGTGTGATTCAT  1126