BAC Information

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BAC

Clone NameB6Ng01-109D19
Chromosome6 (Build37)
Map Location 75,362,147 - 75,475,223
singlet/doubletdoublet
Overlap genenone
Upstream geneEG668132, LOC668136, LOC621306, LOC100042942, LOC668143
Downstream geneEG668145, EG546907, LOC100042952, LOC668153, EG668155
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-109D19.bB6Ng01-109D19.g
ACCDH916197DH916198
length1,0821,051
definitionDH916197|Mus musculus domesticus DNA, BAC clone: B6Ng01-109D19, 5' end.DH916198|Mus musculus domesticus DNA, BAC clone: B6Ng01-109D19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(75,474,136 - 75,475,223)(75,362,147 - 75,363,204)
sequence
gaattctttgtttagctctgagccccattttttaatggggttattagatt
ttctggagtccaccttcttgagttctttatatatattggaaattagtccc
ctatcttatttaggataagtaaaaatccttccccattctcttggtggcct
ttttgtcttattgacggtgtcttttgccttacagaagctttgcagtttta
tgaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctattcaggaattttttccccctgtggcacactttattttattaattaat
atttgtccctacttgccattttctttctccttgaaattgcatactaatag
aggatcagtgtattctatatacattagcaaacatttaaatatcagtgaaa
acataattccagctggttattaaaatatcacgtggaataaatcagatgag
atttatgcaatgcaaaagctatggtgataaactatttgttaattatattg
ttacactcttatcttttttccaaatcagattgtttctctcatcatagatt
cttctttattttatacaataatattattgccattggcatatatactacat
atagtacattttttttttagatcttagccattctagtgatatggaatagt
ttaaaaaaaaagcatatccatatatcctatttttcatgctgtcctatttt
ttttacgttttttctgataatatttgttcttttgttcttagaaaagttga
gagattcagatagtattgtctgcttagtctcccttccataatagttgtct
cccaataactcctgtactcccctgatttcttcaagtccatttaccaagtg
gatatatttttctttttcttttctcttcttccttcctacctacattcctt
tatttatttatttatttatttatttatttatttatttatttattttggtt
ttcaagacagggtttctctgtgtagccctggctgtcctggactcactttg
tagaccaggctggcctcaactcaagaaatcaacttgctctacctctgagt
gctgggattaaagcttgcaccacatgccggag
gaattctactctttcatttggatcttttaccaaagatatttcagtgtatg
tataaatataaataaaaatgtcccagcactaaggagggagaggcaggtgg
atttctgagttccagatcagcctggtctacaaagtgagttccaggacagc
cagggctatacagagaaaccctgtctcgaaaaacaaaaacaaaaaagagt
cttcagaattgtaaatacacaatgtcagcatatgggatgctaagacagct
cagttactctagctccaaggtcagcctgagatatacagtgagatcaaagc
cagcttgggggacatattaaaaagttgtctcataaaaaccagtaaattaa
ttactctgaaaaataattatattcttggatagttttggcaacaagtgctt
tggataataaaaatccaatgtgagttatttaattttaattaatttaaatt
taaaatgtggtattagttttaattattggaaagcttttaagcatcttaga
aattatttgggaatctaagtatacatttgtgattgcatattgaatgaaat
ctaaatattggctcaaatgtttccaattaaggtttggtatctacattaat
atttccttcacgttaagtatctcacaattaataagaatgcttatcaattg
ttatattgatagtacttcagatgaattaaattaaatgataaataatatgg
tctgtgactttttgtttgttatgtttctactagtaagtttaaaggtgatt
catgtagttcacatgatactacaagccaaaatttccatggtgagtatttc
ccaatctaaaaccaagcagactatatggctatatcatttttctttctatt
tcacatttattgttttgctttccccctataagttagtataatcattatct
ttatgaaacactgcagatatgattgtgtcaggctctctcccatggatggg
tcttcaagttgagccagtcattggttggcattcctcaatctctgctctta
tatatgcagcacacttgtacaggatgattttgggttgaaagttttgtgga
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_75474136_75475223
seq2: B6Ng01-109D19.b_46_1127 (reverse)

seq1  CTCCGGGCATGGTGGTGCAAGCCTTTAATCCCAGCACTCAGGAGGTAGAG  50
      |||| ||||| |||||||||| |||||||||||||||||| |||||||||
seq2  CTCC-GGCAT-GTGGTGCAAG-CTTTAATCCCAGCACTCA-GAGGTAGAG  46

seq1  CAGGTGGATTTC-TGAGTTTGAGGCCAGCCTGGTCTACAAAGTGAGTTCC  99
      || || |||||| |||| |||||||||||||||||||||||||||| |||
seq2  CAAGTTGATTTCTTGAG-TTGAGGCCAGCCTGGTCTACAAAGTGAG-TCC  94

seq1  AGGACAGCCAGGGCTACACAGAGAAACCCTGTCTTGAAAAACCAAAATAA  149
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AGGACAGCCAGGGCTACACAGAGAAACCCTGTCTTG-AAAACCAAAATAA  143

seq1  ATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAAGGAATGTAG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAAGGAATGTAG  193

seq1  GTAGGAAGGAAGAAGAGAAAAGAAAAAGAAAAATATATCCACTTGGTAAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGAAGGAAGAAGAGAAAAGAAAAAGAAAAATATATCCACTTGGTAAA  243

seq1  TGGACTTGAAGAAATCAGGGGAGTACAGGAGTTATTGGGAGACAACTATT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTTGAAGAAATCAGGGGAGTACAGGAGTTATTGGGAGACAACTATT  293

seq1  ATGGAAGGGAGACTAAGCAGACAATACTATCTGAATCTCTCAACTTTTCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAGGGAGACTAAGCAGACAATACTATCTGAATCTCTCAACTTTTCT  343

seq1  AAGAACAAAAGAACAAATATTATCAGAAAAAACGTAAAAAAAATAGGACA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACAAAAGAACAAATATTATCAGAAAAAACGTAAAAAAAATAGGACA  393

seq1  GCATGAAAAATAGGATATATGGATATGCTTTTTTTTTAAACTATTCCATA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGAAAAATAGGATATATGGATATGCTTTTTTTTTAAACTATTCCATA  443

seq1  TCACTAGAATGGCTAAGATCTAAAAAAAAAATGTACTATATGTAGTATAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTAGAATGGCTAAGATCTAAAAAAAAAATGTACTATATGTAGTATAT  493

seq1  ATGCCAATGGCAATAATATTATTGTATAAAATAAAGAAGAATCTATGATG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCAATGGCAATAATATTATTGTATAAAATAAAGAAGAATCTATGATG  543

seq1  AGAGAAACAATCTGATTTGGAAAAAAGATAAGAGTGTAACAATATAATTA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAACAATCTGATTTGGAAAAAAGATAAGAGTGTAACAATATAATTA  593

seq1  ACAAATAGTTTATCACCATAGCTTTTGCATTGCATAAATCTCATCTGATT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATAGTTTATCACCATAGCTTTTGCATTGCATAAATCTCATCTGATT  643

seq1  TATTCCACGTGATATTTTAATAACCAGCTGGAATTATGTTTTCACTGATA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCACGTGATATTTTAATAACCAGCTGGAATTATGTTTTCACTGATA  693

seq1  TTTAAATGTTTGCTAATGTATATAGAATACACTGATCCTCTATTAGTATG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATGTTTGCTAATGTATATAGAATACACTGATCCTCTATTAGTATG  743

seq1  CAATTTCAAGGAGAAAGAAAATGGCAAGTAGGGACAAATATTAATTAATA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTCAAGGAGAAAGAAAATGGCAAGTAGGGACAAATATTAATTAATA  793

seq1  AAATAAAGTGTGCCACAGGGGGAAAAAATTCCTGAATAGAACAGCAATGG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAGTGTGCCACAGGGGGAAAAAATTCCTGAATAGAACAGCAATGG  843

seq1  CTTGTGCTGTAAGATCGAGAATTGACAAATGGGACCTCATAAAACTGCAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGCTGTAAGATCGAGAATTGACAAATGGGACCTCATAAAACTGCAA  893

seq1  AGCTTCTGTAAGGCAAAAGACACCGTCAATAAGACAAAAAGGCCACCAAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCTGTAAGGCAAAAGACACCGTCAATAAGACAAAAAGGCCACCAAG  943

seq1  AGAATGGGGAAGGATTTTTACTTATCCTAAATAAGATAGGGGACTAATTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGGGGAAGGATTTTTACTTATCCTAAATAAGATAGGGGACTAATTT  993

seq1  CCAATATATATAAAGAACTCAAGAAGGTGGACTCCAGAAAATCTAATAAC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATATATATAAAGAACTCAAGAAGGTGGACTCCAGAAAATCTAATAAC  1043

seq1  CCCATTAAAAAATGGGGCTCAGAGCTAAACAAAGAATTC  1088
      |||||||||||||||||||||||||||||||||||||||
seq2  CCCATTAAAAAATGGGGCTCAGAGCTAAACAAAGAATTC  1082

seq1: chr6_75362147_75363204
seq2: B6Ng01-109D19.g_68_1118

seq1  GAATTCTACTCTTTCATTTGGATCTTTTACCAAAGATATTTCAGTGTATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACTCTTTCATTTGGATCTTTTACCAAAGATATTTCAGTGTATG  50

seq1  TATAAATATAAATAAAAATGTCCCAGCACTAAGGAGGGAGAGGCAGGTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAATATAAATAAAAATGTCCCAGCACTAAGGAGGGAGAGGCAGGTGG  100

seq1  ATTTCTGAGTTCCAGATCAGCCTGGTCTACAAAGTGAGTTCCAGGACAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTGAGTTCCAGATCAGCCTGGTCTACAAAGTGAGTTCCAGGACAGC  150

seq1  CAGGGCTATACAGAGAAACCCTGTCTCGAAAAACAAAAACAAAAAAGAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCTATACAGAGAAACCCTGTCTCGAAAAACAAAAACAAAAAAGAGT  200

seq1  CTTCAGAATTGTAAATACACAATGTCAGCATATGGGATGCTAAGACAGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGAATTGTAAATACACAATGTCAGCATATGGGATGCTAAGACAGCT  250

seq1  CAGTTACTCTAGCTCCAAGGTCAGCCTGAGATATACAGTGAGATCAAAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTACTCTAGCTCCAAGGTCAGCCTGAGATATACAGTGAGATCAAAGC  300

seq1  CAGCTTGGGGGACATATTAAAAAGTTGTCTCATAAAAACCAGTAAATTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTGGGGGACATATTAAAAAGTTGTCTCATAAAAACCAGTAAATTAA  350

seq1  TTACTCTGAAAAATAATTATATTCTTGGATAGTTTTGGCAACAAGTGCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTCTGAAAAATAATTATATTCTTGGATAGTTTTGGCAACAAGTGCTT  400

seq1  TGGATAATAAAAATCCAATGTGAGTTATTTAATTTTAATTAATTTAAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATAATAAAAATCCAATGTGAGTTATTTAATTTTAATTAATTTAAATT  450

seq1  TAAAATGTGGTATTAGTTTTAATTATTGGAAAGCTTTTAAGCATCTTAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATGTGGTATTAGTTTTAATTATTGGAAAGCTTTTAAGCATCTTAGA  500

seq1  AATTATTTGGGAATCTAAGTATACATTTGTGATTGCATATTGAATGAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTTGGGAATCTAAGTATACATTTGTGATTGCATATTGAATGAAAT  550

seq1  CTAAATATTGGCTCAAATGTTTCCAATTAAGGTTTGGTATCTACATTAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATATTGGCTCAAATGTTTCCAATTAAGGTTTGGTATCTACATTAAT  600

seq1  ATTTCCTTCACGTTAAGTATCTCACAATTAATAAGAATGCTTATCAATTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCTTCACGTTAAGTATCTCACAATTAATAAGAATGCTTATCAATTG  650

seq1  TTATATTGATAGTACTTCAGATGAATTAAATTAAATGATAAATAATATGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTGATAGTACTTCAGATGAATTAAATTAAATGATAAATAATATGG  700

seq1  TCTGTGACTTTTTGTTTGTTATGTTTCTACTAGTAAGTTT-AAGGTGATT  749
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TCTGTGACTTTTTGTTTGTTATGTTTCTACTAGTAAGTTTAAAGGTGATT  750

seq1  CATGTAGTTCACATGATACTACAAGCCAAAATTTCCATGGTGAGTATTTC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTAGTTCACATGATACTACAAGCCAAAATTTCCATGGTGAGTATTTC  800

seq1  CCAATCTAAAACCAAGCAGACTATATGGCTATATCATTTTTCTTTCTATT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATCTAAAACCAAGCAGACTATATGGCTATATCATTTTTCTTTCTATT  850

seq1  TCACATTTATTGTTTTGCTTTCCCCCTATAAGTTAGTATAATCATTATCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATTTATTGTTTTGCTTTCCCCCTATAAGTTAGTATAATCATTATCT  900

seq1  TTATGAAACACTGCAGAATATGATTGTGTCAGGGCTCTCTCCCATGGGAT  949
      |||||||||||||||| |||||||||||||| ||||||||||||| ||||
seq2  TTATGAAACACTGCAG-ATATGATTGTGTCA-GGCTCTCTCCCAT-GGAT  947

seq1  GGGTC-TCAAGTTGAGCCAGTCATTGGTTGGCCATTCCCTCAATCTCTGC  998
      ||||| ||||||||||||||||||||||||| |||| |||||||||||||
seq2  GGGTCTTCAAGTTGAGCCAGTCATTGGTTGG-CATT-CCTCAATCTCTGC  995

seq1  TCTTATATATGCCAGCACCACTTGTACCAGGATGAATTTTGGGTTGAAAG  1048
      ||||||||||| ||||| |||||||| ||||||| |||||||||||||||
seq2  TCTTATATATG-CAGCA-CACTTGTA-CAGGATG-ATTTTGGGTTGAAAG  1041

seq1  TTTTGTGGAA  1058
      ||||||||||
seq2  TTTTGTGGAA  1051