BAC Information

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BAC

Clone NameB6Ng01-114C03
Chromosome6 (Build37)
Map Location 109,519,401 - 109,520,540
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC677205, Bhlhb2, Arl8b, Edem1, EG627371, LOC639110, LOC100043720
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-114C03.bB6Ng01-114C03.g
ACCDH919735DH919736
length1,0461,124
definitionDH919735|Mus musculus domesticus DNA, BAC clone: B6Ng01-114C03, 5' end.DH919736|Mus musculus domesticus DNA, BAC clone: B6Ng01-114C03, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccagagtggaaattaccagcttgcaatcccaccagcaatggagga
gtgttcctcttcctccacatcctcaacagcatctgctgtcacctgagttt
ttgatcttagctattctgactggtgtgaagtggactctcaggattgtttt
gatttgcattttcctgatgactaaagatgttgaacattttaaaggtattt
ctcagccatttgctatccctcagttgggaattcttttttttttagttctg
taccacattttttaatagggttatttggttttctggagtctcacttcttg
aattctttgtatatattggatattagccctctatcggatttaggattggt
aaacatcctttcccaatctgttggttgcctttttgtcttattgatggtgt
cctttgccttacagaagctttgcgattttatgaggtcccattcattaatt
cttgattgtacagtacaagccattggtgttctattcaggaacttttctcc
tgtgcccatatgtttgaggctcttcaccactttctcctctgtaagtttca
gtgtctctggttttatgtgaaggtcattgatccacttagacttgatcttt
gtacaaagacatagaatggatcaatttgcattcttctacatgctaaccac
cagttgagacagcaccatttgttgaaaatgctgtctttatttccactggg
tggttttagctgctttgctaaaaatcaagtgaccatatatttggaggttc
atttctgggtcttcaattctattccattgatatacctatccgtcgctgta
ccagtaccatgcaggtattttgtttggttggttggttttttgtttgtttg
tttgttttgttttgttttgtttatcatcacaattgctctgtagtacagtt
tgaggtcaggatggtgatgccacagaggttcttttatgtgagataatttt
gctgcttagttttttgtattccaaatgaattgcaattgactttctaactc
tatgaagaattgagttggaattcagatggggatcactcgtaatcgt
gaattcataactaataccttgaaaagagattttctatgcctaacattggg
ttttgttaaatagaccatggttttaaatattgccccagctggtgaaagtt
cagtaaaactatgcatttatatactactatgctatatataatgttaagta
ggataataaaattctgcatgaatttttcatacatccttcctgataatttc
tctccttcaacccactccctgttttgactctcactcacttgtttttccct
tttcgtcttttatagcaagtgcatcctacatttcttctctccgatattcc
tttatcgcccacacctcctgctatgattaacttccataatttaaaggaag
aaataactccagctctgaggtctattgattaaaaaaatcaatcataattg
caaatggaatttgtattttattaaacaattttccaaattgttgactggtg
ttttaatggccttgtttatttaaacaattaaattagcatttagtgagaaa
gaaaacttgtagccaattaaagaccaaagtaatatacatagtgtatttac
cagcaattaactgataacttgcttactatgggctatctaacaattaacca
gggaagcattctcaggaaattggaaagcattaatgcaaatgtgttttgga
tttgttcttttcaaatccatttaccatattatctaatttggcatatgcag
aaaatcctcaagaaagattaatattcagaaaacatttttaaagcctttga
tgctgggaattctaattgttttggcaaaaataaattgctaatgctaggaa
tgtataatgcttgctcttcgtcatcacaggtatctgaaacgtgacagaac
agagttttcaggcatagccctatattttgtagaccaacagcacccaggat
gctcttgacctgttgggctatttatgtggtatgaccatttgtccgcaatg
atccttggagcatgagtgcctgtaagaatcatacctatgcaccaccatgt
caagtaaacatgccaaagtgactttgatacatttaacctgtatttactgc
ttattttttaaaagtcacttgtactttaacttgaccctttaccctcatta
ttcaggtttatgatctcaaggtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_109519401_109520540
seq2: B6Ng01-114C03.g_68_1191

seq1  GAATTCATAACTAATACCTTGAAAAGAGATTTTCTATGCCTAACATTGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAACTAATACCTTGAAAAGAGATTTTCTATGCCTAACATTGGG  50

seq1  TTTTGTTAAATAGACCATGGTTTTAAATATTGCCCCAGCTGGTGAAAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTAAATAGACCATGGTTTTAAATATTGCCCCAGCTGGTGAAAGTT  100

seq1  CAGTAAAACTATGCATTTATATACTACTATGCTATATATAATGTTAAGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAAACTATGCATTTATATACTACTATGCTATATATAATGTTAAGTA  150

seq1  GGATAATAAAATTCTGCATGAATTTTTCATACATCCTTCCTGATAATTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAATAAAATTCTGCATGAATTTTTCATACATCCTTCCTGATAATTTC  200

seq1  TCTCCTTCAACCCACTCCCTGTTTTGACTCTCACTCACTTGTTTTTCCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTTCAACCCACTCCCTGTTTTGACTCTCACTCACTTGTTTTTCCCT  250

seq1  TTTCGTCTTTTATAGCAAGTGCATCCTACATTTCTTCTCTCCGATATTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCGTCTTTTATAGCAAGTGCATCCTACATTTCTTCTCTCCGATATTCC  300

seq1  TTTATCGCCCACACCTCCTGCTATGATTAACTTCCATAATTTAAAGGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCGCCCACACCTCCTGCTATGATTAACTTCCATAATTTAAAGGAAG  350

seq1  AAATAACTCCAGCTCTGAGGTCTATTGATTAAAAAAATCAATCATAATTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAACTCCAGCTCTGAGGTCTATTGATTAAAAAAATCAATCATAATTG  400

seq1  CAAATGGAATTTGTATTTTATTAAACAATTTTCCAAATTGTTGACTGGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGGAATTTGTATTTTATTAAACAATTTTCCAAATTGTTGACTGGTG  450

seq1  TTTTAATGGCCTTGTTTATTTAAACAATTAAATTAGCATTTAGTGAGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATGGCCTTGTTTATTTAAACAATTAAATTAGCATTTAGTGAGAAA  500

seq1  GAAAACTTGTAGCCAATTAAAGACCAAAGTAATATACATAGTGTATTTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACTTGTAGCCAATTAAAGACCAAAGTAATATACATAGTGTATTTAC  550

seq1  CAGCAATTAACTGATAACTTGCTTACTATGGGCTATCTAACAATTAACCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAATTAACTGATAACTTGCTTACTATGGGCTATCTAACAATTAACCA  600

seq1  GGGAAGCATTCTCAGGAAATTGGAAAGCATTAATGCAAATGTGTTTTGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGCATTCTCAGGAAATTGGAAAGCATTAATGCAAATGTGTTTTGGA  650

seq1  TTTGTTCTTTTCAAATCCATTTACCATATTATCTAATTTGGCATATGCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTCTTTTCAAATCCATTTACCATATTATCTAATTTGGCATATGCAG  700

seq1  AAAATCCTCAAGAAAGATTAATATTCAGAAAACATTTTTAAAGCCTTTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCCTCAAGAAAGATTAATATTCAGAAAACATTTTTAAAGCCTTTGA  750

seq1  TGCTGGGAATTCTAATTGTTTTGGCAAAAATAAATTGCTAATGCTAGGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGGAATTCTAATTGTTTTGGCAAAAATAAATTGCTAATGCTAGGAA  800

seq1  TGTATAATGCTTGCTCTTCGTCATCACAGGTATCTGAAACGTGACAGAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATAATGCTTGCTCTTCGTCATCACAGGTATCTGAAACGTGACAGAAC  850

seq1  AGAGTTTTCAGGCATAGCCCTATATTTTGTAGACCAACAGCACCCAGGAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTTTCAGGCATAGCCCTATATTTTGTAGACCAACAGCACCCAGGAT  900

seq1  GCTCTTGACCTGTTGGGCTATTTATGTGGTTATGACCATTTGTCCGCAAT  950
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GCTCTTGACCTGTTGGGCTATTTATGTGG-TATGACCATTTGTCCGCAAT  949

seq1  GATCCTTGGAGCATGAGTGCCTGTAAGAATCATACCTATGCACCACCATG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCTTGGAGCATGAGTGCCTGTAAGAATCATACCTATGCACCACCATG  999

seq1  TCAAGTAAACATGCCAAAAGTGACTTTGATACATTTAACCTTGTATTTTA  1050
      ||||||||||||||| |||||||||||||||||||||||| |||| ||||
seq2  TCAAGTAAACATGCC-AAAGTGACTTTGATACATTTAACC-TGTA-TTTA  1046

seq1  CTGCTTAATTTTTTTTAAAAAAGTCACTTGTAACTTTTAACTTGACCCTT  1100
      ||||||| |||||     ||||||||||||||   |||||||||||||||
seq2  CTGCTTATTTTTT-----AAAAGTCACTTGTA--CTTTAACTTGACCCTT  1089

seq1  TAACACTCATTAATTCAAGGTTTAATGGATCTCAAAGTGA  1140
      | || |||||| |||| |||||||   |||||||| ||||
seq2  T-ACCCTCATT-ATTC-AGGTTTA--TGATCTCAAGGTGA  1124