BAC Information

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BAC

Clone NameB6Ng01-114L10
Chromosome6 (Build37)
Map Location 96,999,696 - 97,136,296
singlet/doubletdoublet
Overlap geneC130034I18Rik, A130022J15Rik, Tmf1, Ube1c
Upstream geneC630007B19Rik, LOC100043685, 1700123L14Rik
Downstream geneArl6ip5, Lmod3, Frmd4b, LOC641241, LOC100043692, Mitf
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-114L10.bB6Ng01-114L10.g
ACCDH920165DH920166
length2361,122
definitionDH920165|Mus musculus domesticus DNA, BAC clone: B6Ng01-114L10, 5' end.DH920166|Mus musculus domesticus DNA, BAC clone: B6Ng01-114L10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(96,999,696 - 96,999,931)(97,135,159 - 97,136,296)
sequence
accaatccccattttatttaatgagtaagtatagctgcatgtgttggcac
atgcagataatcccagcacttggaaggtccaggaaggaagacaggagttc
aaggtcatcctcaagtacatagcaaattcaaaactaccttgagctgtatg
agacccagtccaggagatatagatatagatatagatatagatatagatat
agatatagatatagatatggatatggatatggatat
gaattcaaatgcctttattttctctctagctgtgtgtgccactgaggttt
tcaagatagctacaaggtaatgagttttatttttaatatgtgtataaatc
cacattataaccttgctcaattagataaaatgaactctttctttcaccac
agtgcgtacattccccttaataactacctggtattcaatgatgtagatgg
gctgtacacttacacgtttgaagcagagagaaaggttagtagcattaaag
tagcaacaatagttttcactatccagtctttgtttttatatattaattat
taggaattagaagataattatgctatgagttactaaagctaataatatgt
atcttttgttggatagcttaaataaatactataaagcataataatttata
gtaaataatctattgcagaaacatgctttaaagcaaaaaatattttcata
gaaaatatgtatgattataaaacaacttgatttccatatctttgcttaaa
aagagactgagcctggtttgtgtgactctaaattattcttttatgtttgt
aggaaaactgtccagcatgtagccaacttcctcaaaacattcagttttcc
ccatcagctaaactacaggaggtcttagactacctaaccaacagtgcttc
tctgtaagtgttgaggatttatattgtgaacatcattttttaaacttcat
aataaaaaagccagaactatttctttaaatgagatggtgttcactacttt
atttaggcaaatgaagtctccggctatcacagccacattagaggggaaga
acaggacactttacttacaggtcagtagtattaatttctaatttttttaa
gataattgtattatttttttcttaatgtgctatacattaaaataaatgtt
gtttctctagtcagtaacgtctattgaagaacgaaccaggcccaatcttt
ccaaatcattaaaaggtattttaagtaaatgtgtatagtatagttttctt
tttagtgatgtctgctctcatcccttctctctcctcctcctcccctctgt
gtgttggggtaagggggctgtctgtctgtcgtccttgtacaggtcttatc
ctgtgcctgcgttctctcagcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_96999696_96999931
seq2: B6Ng01-114L10.b_51_286

seq1  ACCAATCCCCATTTTATTTAATGAGTAAGTATAGCTGCATGTGTTGGCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATCCCCATTTTATTTAATGAGTAAGTATAGCTGCATGTGTTGGCAC  50

seq1  ATGCAGATAATCCCAGCACTTGGAAGGTCCAGGAAGGAAGACAGGAGTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGATAATCCCAGCACTTGGAAGGTCCAGGAAGGAAGACAGGAGTTC  100

seq1  AAGGTCATCCTCAAGTACATAGCAAATTCAAAACTACCTTGAGCTGTATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCATCCTCAAGTACATAGCAAATTCAAAACTACCTTGAGCTGTATG  150

seq1  AGACCCAGTCCAGGAGATATAGATATAGATATAGATATAGATATAGATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCCAGTCCAGGAGATATAGATATAGATATAGATATAGATATAGATAT  200

seq1  AGATATAGATATAGATATGGATATGGATATGGATAT  236
      ||||||||||||||||||||||||||||||||||||
seq2  AGATATAGATATAGATATGGATATGGATATGGATAT  236

seq1: chr6_97135159_97136296
seq2: B6Ng01-114L10.g_69_1190 (reverse)

seq1  GGCTGAGGAGACAGCAGGCACAGGGATAAGGCACCTGTACCAGGGACGGA  50
      |||||| ||||  ||||||||| |||||||  ||||||| || |||| ||
seq2  GGCTGA-GAGAACGCAGGCACA-GGATAAG--ACCTGTA-CAAGGAC-GA  44

seq1  CAGACAGACAGCCCCCTTTCCCCACACACACAGAGGGGGAGGGAAGGAGG  100
      |||||||||||||||||| ||||| |||||||||||||      ||||||
seq2  CAGACAGACAGCCCCCTTACCCCA-ACACACAGAGGGG------AGGAGG  87

seq1  GAAGGAGGAAGAAGGGATGGAGAGCAGACATTCACTAAAAAAGAAAACTA  150
        |||||  ||||||||| ||||||||||| ||||| |||||||||||||
seq2  --AGGAGAGAGAAGGGAT-GAGAGCAGACA-TCACT-AAAAAGAAAACTA  132

seq1  TAACTATACACATTTACTTAAAATACCTTTTAATGTTTTGGAAAGATTGG  200
      | ||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  T-ACTATACACATTTACTTAAAATACCTTTTAATGATTTGGAAAGATTGG  181

seq1  GCCTGGTTCGTTCTTCAATAGACGTTACTGACTAGAG-AACAACA-TTAT  248
      ||||||||||||||||||||||||||||||||||||| ||||||| ||||
seq2  GCCTGGTTCGTTCTTCAATAGACGTTACTGACTAGAGAAACAACATTTAT  231

seq1  TTTAATGTATAGCACATTAAG-AAAAAATAATACAATTATCTTAAAAAAA  297
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TTTAATGTATAGCACATTAAGAAAAAAATAATACAATTATCTTAAAAAAA  281

seq1  TTAGAAATTAATACTACTGACCTGTAAGTAAAGTGTCCTGTTCTTCCCCT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAATTAATACTACTGACCTGTAAGTAAAGTGTCCTGTTCTTCCCCT  331

seq1  CTAATGTGGCTGTGATAGCCGGAGACTTCATTTGCCTAAATAAAGTAGTG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGTGGCTGTGATAGCCGGAGACTTCATTTGCCTAAATAAAGTAGTG  381

seq1  AACACCATCTCATTTAAAGAAATAGTTCTGGCTTTTTTATTATGAAGTTT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCATCTCATTTAAAGAAATAGTTCTGGCTTTTTTATTATGAAGTTT  431

seq1  AAAAAATGATGTTCACAATATAAATCCTCAACACTTACAGAGAAGCACTG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATGATGTTCACAATATAAATCCTCAACACTTACAGAGAAGCACTG  481

seq1  TTGGTTAGGTAGTCTAAGACCTCCTGTAGTTTAGCTGATGGGGAAAACTG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTAGGTAGTCTAAGACCTCCTGTAGTTTAGCTGATGGGGAAAACTG  531

seq1  AATGTTTTGAGGAAGTTGGCTACATGCTGGACAGTTTTCCTACAAACATA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTTTGAGGAAGTTGGCTACATGCTGGACAGTTTTCCTACAAACATA  581

seq1  AAAGAATAATTTAGAGTCACACAAACCAGGCTCAGTCTCTTTTTAAGCAA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAATAATTTAGAGTCACACAAACCAGGCTCAGTCTCTTTTTAAGCAA  631

seq1  AGATATGGAAATCAAGTTGTTTTATAATCATACATATTTTCTATGAAAAT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATGGAAATCAAGTTGTTTTATAATCATACATATTTTCTATGAAAAT  681

seq1  ATTTTTTGCTTTAAAGCATGTTTCTGCAATAGATTATTTACTATAAATTA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTGCTTTAAAGCATGTTTCTGCAATAGATTATTTACTATAAATTA  731

seq1  TTATGCTTTATAGTATTTATTTAAGCTATCCAACAAAAGATACATATTAT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGCTTTATAGTATTTATTTAAGCTATCCAACAAAAGATACATATTAT  781

seq1  TAGCTTTAGTAACTCATAGCATAATTATCTTCTAATTCCTAATAATTAAT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTTAGTAACTCATAGCATAATTATCTTCTAATTCCTAATAATTAAT  831

seq1  ATATAAAAACAAAGACTGGATAGTGAAAACTATTGTTGCTACTTTAATGC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAAAACAAAGACTGGATAGTGAAAACTATTGTTGCTACTTTAATGC  881

seq1  TACTAACCTTTCTCTCTGCTTCAAACGTGTAAGTGTACAGCCCATCTACA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAACCTTTCTCTCTGCTTCAAACGTGTAAGTGTACAGCCCATCTACA  931

seq1  TCATTGAATACCAGGTAGTTATTAAGGGGAATGTACGCACTGTGGTGAAA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGAATACCAGGTAGTTATTAAGGGGAATGTACGCACTGTGGTGAAA  981

seq1  GAAAGAGTTCATTTTATCTAATTGAGCAAGGTTATAATGTGGATTTATAC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGTTCATTTTATCTAATTGAGCAAGGTTATAATGTGGATTTATAC  1031

seq1  ACATATTAAAAATAAAACTCATTACCTTGTAGCTATCTTGAAAACCTCAG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATTAAAAATAAAACTCATTACCTTGTAGCTATCTTGAAAACCTCAG  1081

seq1  TGGCACACACAGCTAGAGAGAAAATAAAGGCATTTGAATTC  1138
      |||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACACACAGCTAGAGAGAAAATAAAGGCATTTGAATTC  1122