BAC Information

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BAC

Clone NameB6Ng01-117K14
Chromosome6 (Build37)
Map Location 37,261,013 - 37,398,381
singlet/doubletdoublet
Overlap geneCreb3l2
Upstream gene9330158H04Rik, Chrm2, EG620863, LOC100039370, Ptn, LOC100039514, Dgki, EG665024
Downstream geneAkr1d1, LOC665046, Ybx1-ps2, LOC100039636, LOC665102, Trim24, Svopl, Atp6v0a4, LOC100039657, D630002J15Rik, D630045J12Rik, LOC665125, Zc3hav1l, Zc3hav1, Rpl30-ps1, Ttc26, D130059P03Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-117K14.bB6Ng01-117K14.g
ACCDH922345DH922346
length1,1431,058
definitionDH922345|Mus musculus domesticus DNA, BAC clone: B6Ng01-117K14, 5' end.DH922346|Mus musculus domesticus DNA, BAC clone: B6Ng01-117K14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,397,208 - 37,398,381)(37,261,013 - 37,262,080)
sequence
gaattccattcatgttacgttaaaaataaagaaaaactggcgagtcaagc
ccatggataccagaatagccatggcctccagggtagtacgggatggataa
tatcacaaggacgttctttgagggatggttctgcacgttcacctgggtgt
tagtggttgtaataaaggtgagacttggattccaagagacctttctggtt
aactagctgcattgttcattttcagccacagggtggcagcgttgtagcga
tgactaaaatcagggccttctctgacgtttgcttagcatggattgtgctt
tcctgcttccttcaaggagcctttgtcccttgtgacactctgaacagtgg
cctcttctttaaattaattatttttcttacaactatatagttgagcatgt
ctaccctctacctcctcacccccctttcctcatctctcctttcttatggc
agtttgaatgagatgcctattacagtctctggcctttcaatacttggtcc
ccaactggagactctgcttgagtaggtctagagggtgtggttttgctgga
gaaccgtatcactggggggtggcttgacattttgaagttctttgtcattc
ttggttcgatctctctgcttccttgcctatggttcaagatgtgagctctc
agctgttcccaccaccacattagctatcgctacctgtcccttgccacacc
tctccaccatgacagagtctctcgttctcgctcttgctctctagctgtaa
gccaaataacccctatcttctaaacagccttggctatggtgttctgtcac
agcaatagaaaagtaaccgccgggcggtggtggcgcacgcctttaatccc
agcacttgggaggcagaggcaggcggatttctgagtttgaggcagcctgg
tctacaaagtgagttcaggatagccagggctacacagagaaccctgtcaa
aaaagtaagcatacagtcctcatttcctctttcatttatttcatttaatt
acgcatacatgtaaatttagctagctattgtttccatgtctcatcatgcc
ccgcccagccatcaatatgaggtattcttttttagtttcccgatgggttg
cttgttggcatttatatcttagccacttaagatttgaatatat
gaattctttctattatcactttaattcacacgattttttttttttgcaga
caagccgcttgttacataacaatagaatctaaatagttctcaaatgtaat
atgaaagtataaaggactggtaattaatctgaaaccacagtatcatggat
gaccatgttgccaaattgaatcccttcagtaagatagagctctgtttgcc
tccagagaaggtttgagggtgggtactgtgaaaaccatgaggtctaatca
tatctctaggctgcaatcagaaggaccgctcagctcctggcctgcaggaa
caccacttgcctgtgcttagcaaacattttcataaccattctgtcttcct
tagctcacaatcataaaacattgttactcggtgatcagtgcccatgggcc
ctgaaatctcacaaccgtgatgaagggctgtcctagttggtgcaaagtat
gtgtatgtgccctgcattagtttttgattggtcacaagcatgaagagaaa
aggtttaacattgaaaagaaataatagaagctgtaggttcttgtggtcta
ctgaggagcattattcaacactgcaaccctctcgttatctatgggaagtt
ctccactgttttgctgttcatctgcttcagtaagtgttaattcctccagg
acagctagtccgtggctctagcacattacctgggtacaccctacagtgat
gcccctgtgatcctgccggtgacccactgcctgattttttcagcgagcgc
agacctatgtgactatggattcctgagcttttctgctatggagtttgtag
cagttgattccctggattggagaagtcagtggaattagagaacagagcaa
tcaagctcagtccacaggttagccaatttcagatgtggggatggggtgaa
ggtcatctggcttgctggctcacctactcaccacaatgggcatttagatt
aaaccatgagcactcactcatctttacactttcatcatctgagccctgac
tagacatgaatcctggaattaaagcagcctagtgagccgaaacccttaac
aaatcccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_37397208_37398381
seq2: B6Ng01-117K14.b_45_1187 (reverse)

seq1  ATATATTCTAAATCTTAAGGTGGGCTAAGAATATAAATGCCAAACAAAGC  50
      |||||||| ||||||||||   ||||||| |||||||||||||   ||||
seq2  ATATATTC-AAATCTTAAG--TGGCTAAG-ATATAAATGCCAA--CAAGC  44

seq1  AAAACCATACGGGGAAACTAAATAAGAAATACTCATAATTTTGATGTGGC  100
       || ||||   ||||||||||| |||||   ||||||   ||||  ||||
seq2  -AACCCAT--CGGGAAACTAAAAAAGAATACCTCATA---TTGA--TGGC  86

seq1  TGGGGCGTGGGCATGATTGAGAACATGGGAAACAAATAGCTTAGGCTAAA  150
      | ||||| |||||||| |||| |||| |||||| |||||||   ||||||
seq2  T-GGGCG-GGGCATGA-TGAG-ACAT-GGAAAC-AATAGCT--AGCTAAA  128

seq1  TTTACATGTATGCGTACATTAAATGAAATTAAATGAAAGAGGAAATGAGG  200
      |||||||||||||||| ||||||||||| |||||||||||||||||||||
seq2  TTTACATGTATGCGTA-ATTAAATGAAA-TAAATGAAAGAGGAAATGAGG  176

seq1  ACTGTATTGCTTACTTTTTTTTGGACAGGGTTTCTCTGTGTAGCCCTGGC  250
      |||||| |||||||||||||   ||||||| |||||||||||||||||||
seq2  ACTGTA-TGCTTACTTTTTT---GACAGGG-TTCTCTGTGTAGCCCTGGC  221

seq1  TATCCTGGAACTCACTTTGTAGACCAGGCTGGCCTCAAACTCAGAAATCC  300
      |||||| ||||||||||||||||||||||| |||||||||||||||||||
seq2  TATCCT-GAACTCACTTTGTAGACCAGGCT-GCCTCAAACTCAGAAATCC  269

seq1  GCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCGTGCGCCACCACCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCGTGCGCCACCACCG  319

seq1  CCCGGCGGTTACTTTTCTATTGCTGTGACAGAACACCATAGCCAAGGCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGGCGGTTACTTTTCTATTGCTGTGACAGAACACCATAGCCAAGGCTG  369

seq1  TTTAGAAGATAGGGGTTATTTGGCTTACAGCTAGAGAGCAAGAGCGAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAAGATAGGGGTTATTTGGCTTACAGCTAGAGAGCAAGAGCGAGAA  419

seq1  CGAGAGACTCTGTCATGGTGGAGAGGTGTGGCAAGGGACAGGTAGCGATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGAGACTCTGTCATGGTGGAGAGGTGTGGCAAGGGACAGGTAGCGATA  469

seq1  GCTAATGTGGTGGTGGGAACAGCTGAGAGCTCACATCTTGAACCATAGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATGTGGTGGTGGGAACAGCTGAGAGCTCACATCTTGAACCATAGGC  519

seq1  AAGGAAGCAGAGAGATCGAACCAAGAATGACAAAGAACTTCAAAATGTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGCAGAGAGATCGAACCAAGAATGACAAAGAACTTCAAAATGTCA  569

seq1  AGCCACCCCCCAGTGATACGGTTCTCCAGCAAAACCACACCCTCTAGACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACCCCCCAGTGATACGGTTCTCCAGCAAAACCACACCCTCTAGACC  619

seq1  TACTCAAGCAGAGTCTCCAGTTGGGGACCAAGTATTGAAAGGCCAGAGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCAAGCAGAGTCTCCAGTTGGGGACCAAGTATTGAAAGGCCAGAGAC  669

seq1  TGTAATAGGCATCTCATTCAAACTGCCATAAGAAAGGAGAGATGAGGAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATAGGCATCTCATTCAAACTGCCATAAGAAAGGAGAGATGAGGAAA  719

seq1  GGGGGGTGAGGAGGTAGAGGGTAGACATGCTCAACTATATAGTTGTAAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGGTGAGGAGGTAGAGGGTAGACATGCTCAACTATATAGTTGTAAGA  769

seq1  AAAATAATTAATTTAAAGAAGAGGCCACTGTTCAGAGTGTCACAAGGGAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAATTAATTTAAAGAAGAGGCCACTGTTCAGAGTGTCACAAGGGAC  819

seq1  AAAGGCTCCTTGAAGGAAGCAGGAAAGCACAATCCATGCTAAGCAAACGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCTCCTTGAAGGAAGCAGGAAAGCACAATCCATGCTAAGCAAACGT  869

seq1  CAGAGAAGGCCCTGATTTTAGTCATCGCTACAACGCTGCCACCCTGTGGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAAGGCCCTGATTTTAGTCATCGCTACAACGCTGCCACCCTGTGGC  919

seq1  TGAAAATGAACAATGCAGCTAGTTAACCAGAAAGGTCTCTTGGAATCCAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAATGAACAATGCAGCTAGTTAACCAGAAAGGTCTCTTGGAATCCAA  969

seq1  GTCTCACCTTTATTACAACCACTAACACCCAGGTGAACGTGCAGAACCAT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCACCTTTATTACAACCACTAACACCCAGGTGAACGTGCAGAACCAT  1019

seq1  CCCTCAAAGAACGTCCTTGTGATATTATCCATCCCGTACTACCCTGGAGG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCAAAGAACGTCCTTGTGATATTATCCATCCCGTACTACCCTGGAGG  1069

seq1  CCATGGCTATTCTGGTATCCATGGGCTTGACTCGCCAGTTTTTCTTTATT  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGCTATTCTGGTATCCATGGGCTTGACTCGCCAGTTTTTCTTTATT  1119

seq1  TTTAACGTAACATGAATGGAATTC  1174
      ||||||||||||||||||||||||
seq2  TTTAACGTAACATGAATGGAATTC  1143

seq1: chr6_37261013_37262080
seq2: B6Ng01-117K14.g_68_1125

seq1  GAATTCTTTCTATTATCACTTTAATTCACACGATTTTTTTTTTTTGCAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTATTATCACTTTAATTCACACGATTTTTTTTTTTTGCAGA  50

seq1  CAAGCCGCTTGTTACATAACAATAGAATCTAAATAGTTCTCAAATGTAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCGCTTGTTACATAACAATAGAATCTAAATAGTTCTCAAATGTAAT  100

seq1  ATGAAAGTATAAAGGACTGGTAATTAATCTGAAACCACAGTATCATGGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAGTATAAAGGACTGGTAATTAATCTGAAACCACAGTATCATGGAT  150

seq1  GACCATGTTGCCAAATTGAATCCCTTCAGTAAGATAGAGCTCTGTTTGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCATGTTGCCAAATTGAATCCCTTCAGTAAGATAGAGCTCTGTTTGCC  200

seq1  TCCAGAGAAGGTTTGAGGGTGGGTACTGTGAAAACCATGAGGTCTAATCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAGAAGGTTTGAGGGTGGGTACTGTGAAAACCATGAGGTCTAATCA  250

seq1  TATCTCTAGGCTGCAATCAGAAGGACCGCTCAGCTCCTGGCCTGCAGGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCTAGGCTGCAATCAGAAGGACCGCTCAGCTCCTGGCCTGCAGGAA  300

seq1  CACCACTTGCCTGTGCTTAGCAAACATTTTCATAACCATTCTGTCTTCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACTTGCCTGTGCTTAGCAAACATTTTCATAACCATTCTGTCTTCCT  350

seq1  TAGCTCACAATCATAAAACATTGTTACTCGGTGATCAGTGCCCATGGGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTCACAATCATAAAACATTGTTACTCGGTGATCAGTGCCCATGGGCC  400

seq1  CTGAAATCTCACAACCGTGATGAAGGGCTGTCCTAGTTGGTGCAAAGTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAATCTCACAACCGTGATGAAGGGCTGTCCTAGTTGGTGCAAAGTAT  450

seq1  GTGTATGTGCCCTGCATTAGTTTTTGATTGGTCACAAGCATGAAGAGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATGTGCCCTGCATTAGTTTTTGATTGGTCACAAGCATGAAGAGAAA  500

seq1  AGGTTTAACATTGAAAAGAAATAATAGAAGCTGTAGGTTCTTGTGGTCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTAACATTGAAAAGAAATAATAGAAGCTGTAGGTTCTTGTGGTCTA  550

seq1  CTGAGGAGCATTATTCAACACTGCAACCCTCTCGTTATCTATGGGAAGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGAGCATTATTCAACACTGCAACCCTCTCGTTATCTATGGGAAGTT  600

seq1  CTCCACTGTTTTGCTGTTCATCTGCTTCAGTAAGTGTTAATTCCTCCAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACTGTTTTGCTGTTCATCTGCTTCAGTAAGTGTTAATTCCTCCAGG  650

seq1  ACAGCTAGTCCGTGGCTCTAGCACATTACCTGGGTACACCCTACAGTGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTAGTCCGTGGCTCTAGCACATTACCTGGGTACACCCTACAGTGAT  700

seq1  GCCCCTGTGATCCTGCCGGTGACCCACTGCCTGATTTTTTCAGCGAGCGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCTGTGATCCTGCCGGTGACCCACTGCCTGATTTTTTCAGCGAGCGC  750

seq1  AGACCTATGTGACTATGGATTCCTGAGCTTTTCTGCTATGGAGTTTGTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTATGTGACTATGGATTCCTGAGCTTTTCTGCTATGGAGTTTGTAG  800

seq1  CAGTTGATTCCCTGGATTGGAGAAGTCAGTGGAATTAGAGAACAGAGCAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGATTCCCTGGATTGGAGAAGTCAGTGGAATTAGAGAACAGAGCAA  850

seq1  TCAGGCTCAGTCCACAGGTTAGCCAATTTCAGATGTGGGGATGGGGTGAA  900
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGCTCAGTCCACAGGTTAGCCAATTTCAGATGTGGGGATGGGGTGAA  900

seq1  GGTTCATCTGGC-TGCTGGCTCACCTACCTCACCCACAATGGGCATTTAG  949
      || ||||||||| |||||||||||||| |||| |||||||||||||||||
seq2  GG-TCATCTGGCTTGCTGGCTCACCTA-CTCA-CCACAATGGGCATTTAG  947

seq1  ATTAAACCATGAGCACTCACTCATCTTTACACTTTCATTCAGCTGGAGCC  999
      ||||||||||||||||||||||||||||||||||||| ||| || |||||
seq2  ATTAAACCATGAGCACTCACTCATCTTTACACTTTCA-TCATCT-GAGCC  995

seq1  CTGAGCTAGAACATGGATCCTGGATTTAAAGCAGCCAAGTGAGCACAGAA  1049
      |||| |||| ||||| |||||||| ||||||||||| |||||||     |
seq2  CTGA-CTAG-ACATGAATCCTGGAATTAAAGCAGCCTAGTGAGC---CGA  1040

seq1  AACCCTGTAACAAAGCCCC  1068
      |||||| ||||||| ||||
seq2  AACCCT-TAACAAATCCCC  1058