BAC Information

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BAC

Clone NameB6Ng01-121G07
Chromosome6 (Build37)
Map Location 60,887,759 - 60,887,878
singlet/doubletsinglet
Overlap genenone
Upstream geneEG627108, EG434019, LOC671300, EG627178, LOC100041706, LOC100041717, A530053G22Rik, LOC667066, LOC100041726, Snca, ENSMUSG00000064018
Downstream geneMmrn1, LOC100041756, LOC100041764, C130092O11Rik, LOC100042694
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-121G07.bB6Ng01-121G07.g
ACCDH925088DH925089
length1,239995
definitionDH925088|Mus musculus domesticus DNA, BAC clone: B6Ng01-121G07, 5' end.DH925089|Mus musculus domesticus DNA, BAC clone: B6Ng01-121G07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacacacctatggttacttgatctttgataacggagctaaaaaga
cagcattttcaacatatggtgctggcacaactggcagttatcatgtagaa
gaatgcgaattgatccattcttatctcctgtacaaagctgaagtctaagt
ggattctagaacgccacataaaaccagagacactgaaatttatagaggag
aaagtgggaaaaggcctcaaagatatgggcacagaggaaaaattcctaaa
aagaacagcaatggcctgtgctataagatcaagaattgacaaatgggacc
tcataaaattgcaaagcttctgtaaggcaaaagacactgtcaataagaca
aaaagaccaccaccagactgggaaagaacttttaccaatcctaaatctga
taggggactaatatccaatatatataaagagctcaagaagctggactcca
gaaattcaaataaccccattaaaaaatagggtacagagctaaacaaagaa
ttctaaactgaagaataccgaagggctcagaagcacttgtaaaatgttca
acatccttaatcatctgggaaatgcaaattaaaacaaccctgagattcca
cctcaaaccagtcagaatggtttggatcaaaaattcagatgacagcagat
gctggcgaggatgtggagaaaaaggagcactcttccattgcaagcttgta
caaccactctggaaatcagtctggtggttcctcagaaaattggacatagt
actaccagaagattacccaggaatacctctcctgggcatatacccagatg
ttccaactggtaataaggacacatgctccactatgttcattgcagcccta
tgtataatagccagaagctggaaagaacccagatgtccctcaacagaaga
atagatacagaaaatgtggtacatttacacaatggagtactactcagtta
taaaaacatgaatttatgaaattcttaaggcaaatggatgtatctggagg
atatcatcctgagtgaggtaacccaatcacaaaagaactcactgatatgc
accccactaagtggtcattagctcagaaacttagaatactcaaaataaat
tggcaaaccacaggaaaatcagataagaccaatgtggtggattcttcatt
tctctccgaattaggaaaaccaatcattggaggatacagagaccagctga
gcgtgaaataagaatggaccacatctagagagactgtgg
gaattctttgtttagctctgtaccccattttttaatagggttatttgatt
ttctggagtccatcttcttcagttcttcatatatattagacattagtccc
ctgtgtgatttaggattggtaaaatttttttcctaacctgttggtggctt
tttgtcttactttcttttgccttacagaagctttccaattttatgaggtc
ccatttgtcgattctttatcttacagcacaagccattgctgttctgttca
ggaattttttccctgtgcccatatcttccaggcttttccccactttcttc
tctataagtttcagtgtctctggttttatgtggagttccttgatccactt
agacttgagctttgtataaggagataagaatggatcaatttgaattcttc
tacatgataaccgccagttgtgctagcaccatttgttgaaaatgctgtcc
ttttcccactggatagctttatctcctttgtcaaagatcaagggaccata
ggtgtgtgggttcatttctggttcttcatttctattccattgatctacct
gtctgttgctgtatcagtaccatgcaggtttttttttttttaatcataat
tgctctgtagtacagcttgaggtcaggcatggtgattccaccagagattc
ttttattgttgagaatagtttttgctatcctaggttttttgttattccag
atgaatttgcaaattgccctttctaattcattgaagaattgagttggaat
ttttctgtagattgcttccggcaagatagccatttttactatattgatcc
tgccaatctatgagcattggagatatttccatcttctgagatcttctttg
attaatttcttaagagacttgaagttcttatatttttggttgtgagccta
gcctttatggctgagccatctctcagcccaagcttgagtcttgtcataca
gatctttcacttcctagtcagcgtcacaccaagtatttatatatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_60887759_60887878
seq2: B6Ng01-121G07.g_447_992

seq1  ATCAATTCACATTTTTCTACATGATAACCGCCAGTTGTGCCAGCACCATT  50
      |||||||   ||| |||||||||||||||||||||||||| |||||||||
seq2  ATCAATTTGAATTCTTCTACATGATAACCGCCAGTTGTGCTAGCACCATT  50

seq1  TGTTGAAAATGCTGTC-------------------TTATATTTTTGGT--  79
      ||||||||||||||||                   |||| |  || ||  
seq2  TGTTGAAAATGCTGTCCTTTTCCCACTGGATAGCTTTATCTCCTTTGTCA  100

seq1  -------TGTGAGCCTAG------CCTTTAATGGCTGAGCCATC-TCTCC  115
              | || | |||         || ||  |||   | || | || 
seq2  AAGATCAAGGGACCATAGGTGTGTGGGTTCATTTCTGGTTCTTCATTTCT  150

seq1  AGCCC---------------------------------------------  120
      |  ||                                             
seq2  ATTCCATTGATCTACCTGTCTGTTGCTGTATCAGTACCATGCAGGTTTTT  200

seq1  --------------------------------------------------  120
                                                        
seq2  TTTTTTTTAATCATAATTGCTCTGTAGTACAGCTTGAGGTCAGGCATGGT  250

seq1  --------------------------------------------------  120
                                                        
seq2  GATTCCACCAGAGATTCTTTTATTGTTGAGAATAGTTTTTGCTATCCTAG  300

seq1  --------------------------------------------------  120
                                                        
seq2  GTTTTTTGTTATTCCAGATGAATTTGCAAATTGCCCTTTCTAATTCATTG  350

seq1  --------------------------------------------------  120
                                                        
seq2  AAGAATTGAGTTGGAATTTTTCTGTAGATTGCTTCCGGCAAGATAGCCAT  400

seq1  --------------------------------------------------  120
                                                        
seq2  TTTTACTATATTGATCCTGCCAATCTATGAGCATTGGAGATATTTCCATC  450

seq1  --------------------------------------------------  120
                                                        
seq2  TTCTGAGATCTTCTTTGATTAATTTCTTAAGAGACTTGAAGTTCTTATAT  500

seq1  ----------------------------------------------  120
                                                    
seq2  TTTTGGTTGTGAGCCTAGCCTTTATGGCTGAGCCATCTCTCAGCCC  546